CuGenDBv2

Gene ID	MC00g0666
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RRM domain-containing protein
Genome location	scaffold230:117844..128183
RNA-Seq Expression	MC00g0666
Synteny	MC00g0666
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022151341.1 uncharacterized protein LOC111019305 [Momordica charantia]

1.38e-284

96.72

Show/hide

Query:  MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLP
        MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLP
Subjt:  MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLP

Query:  LKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGI
        LKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGI
Subjt:  LKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGI

Query:  INIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR--------------VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEV
        INIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR              VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEV
Subjt:  INIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR--------------VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEV

Query:  IRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLR
        IRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLR
Subjt:  IRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLR

Query:  VKEKAVLTDVYSRYGNKSAALVSKEGN
        VKEKAVLTDVYSRYGNKSAALVSKEGN
Subjt:  VKEKAVLTDVYSRYGNKSAALVSKEGN

XP_022946475.1 uncharacterized protein LOC111450524 [Cucurbita moschata]

1.90e-159

64.76

Show/hide

Query:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD
        M+DS  LH   RF   W S  HS+   SLLLP  YTA Y L  P NPNSTKF S HF LSLVH P  + F V A KK G+G   +   +DSD EFD   D
Subjt:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD

Query:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL
         + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+EQSR AQAANINKLK+Q  S  NS ++V + +A +I +TG  VRI+NLPKK+NIHRDL
Subjt:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL

Query:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA
        ++AF+ FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDAI              RVQKQIKCE++N++TS SA E SV ST  +   I E EAEQ A
Subjt:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA

Query:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT
        D+D DL+ EV RTRVED+E+NL  VSEL SDDED+   ESRTESKI   S KEL++IHE EE+ P GREE+HRE PPI  K KVSKKKQPKEKGEKKS  
Subjt:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT

Query:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
         IPGSAKRLR+KEKAVLTDVYSRYG KSA L SKEGN
Subjt:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

XP_022999318.1 uncharacterized protein LOC111493728 [Cucurbita maxima]

6.17e-160

64.76

Show/hide

Query:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD
        M+DS  LH   RF   W S  HS+   SLLLP   T +Y L  P NPNSTKF S HF LSLVH P  + F VF+ KK G+G   +   +DSDIEFD   D
Subjt:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD

Query:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL
         + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+EQSR AQAANINKLK+Q  S  NSS++V + +A +I +TG  VR++NLPKK+NIHRDL
Subjt:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL

Query:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA
        ++AFK FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDAI              RVQKQIKCE++N++TS  A E SV ST H+   I E +AEQ A
Subjt:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA

Query:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT
        D+D DL+ EV RTRVED+E+NL  VSELHSDD+DN   ESRTESKI  PS KEL++IHE EEI P GREE+HRE PPI  K +VSKKKQPKEKGE KS  
Subjt:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT

Query:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
         IPGSAKRLR+KEKAVLTDVYSRYG KSA L SKEGN
Subjt:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

XP_023547227.1 uncharacterized protein LOC111806104 [Cucurbita pepo subsp. pepo]

3.07e-163

65.22

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Query:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD
        M+DS  LH   RF   W S  HS+P  SLLLP  YTA Y L  P N NSTKF S HF LSLVH P  + F V A KK G+G   +   +DSD EFD   D
Subjt:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD

Query:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL
         + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+EQSR AQAANINKLK+Q  S  NS ++VA+ +A +I +TG  VR++NLPKK+NIHRDL
Subjt:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL

Query:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA
        ++AFK FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDAI              RVQKQIKCE++N++TS SA E SV ST  +   I E EA Q A
Subjt:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA

Query:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT
        D+D DL+ EV RTRVED+E+NL  VSELHSDDED+   ESRTESKI  PS KEL++IHE EEI P GREE+HRE PPI  K KVSKKKQPKEKGEKKS  
Subjt:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT

Query:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
         IPGSAKRLR+KEKAVLTDVYSRYG KSA + SKEGN
Subjt:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

XP_038890170.1 uncharacterized protein LOC120079826 [Benincasa hispida]

5.61e-161

66.83

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Query:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---------EVLLPLKKMKEWLAGRPRGFGEGKEYDTSIED
        ++PNSTKF  PHF  SLVH    +GF VFA K+ G+G   + + ++SDIEFD+FFDE+E         E+LLPLK  +EW   RPRGFGEGK YDTSIED
Subjt:  SNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---------EVLLPLKKMKEWLAGRPRGFGEGKEYDTSIED

Query:  KLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDC
        KLLQE+EQSR AQAANINKL NQS SE  SS++  E   ++I STG  VRIVNLPKKKNIHRDL+VAFK FPGIINI PAV+GNKKTRDPICKGFAFVDC
Subjt:  KLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDC

Query:  KSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNE
        KSEGDA+              RVQKQIKCE++NR+T +S  +SSVGST H+   I E EAE+  D+D DL+ E +RTR+ED+E++L  VSELHSD ED+ 
Subjt:  KSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNE

Query:  DAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEG
          ESRTESKI+SPS++E+ +IHE EEIL   REE+ REI PIKGK KVSKKKQPKEKGEKKSL EIPGSAKRLR+KEKAVLTDVYSRYGNKSA LVSKEG
Subjt:  DAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEG

Query:  N
        N
Subjt:  N

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KQN3 Uncharacterized protein

4.22e-155

66.33

Show/hide

Query:  STKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDE-------EEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL
        STKF  PH  LSL+ A   +GF VFA K+ G+G   + +P+DSDI FDEFFDE       E+++LLPLK  KEW A RPRGFGEGK YDTSIED LLQE+
Subjt:  STKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDE-------EEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQEL

Query:  EQSRAAQAANINKLKNQSSES-NSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA
        EQ R AQAANINKLK+QSS + NSS++V E+ A +I STG  VRI+NLP+KKNIHRDLVVAFK FPGIINI PAV+GNKKTRDP+CKGFAFVDCKSEGDA
Subjt:  EQSRAAQAANINKLKNQSSES-NSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDA

Query:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT
        +              RVQKQIKCE++NR+TS+SA  SS+ ST H+   I E EAEQ  D+D DL+ E  RT+ ED+E++L  VSE HS +ED+   ESRT
Subjt:  I--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRT

Query:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
        E  I+SPS KE+ +I E EEILP GREEIHRE+ PIK K KVSKKKQPKEKGEKK LTEIPGSAKRLR+KEKAVLTDVYSRYG KSA LVS+EGN
Subjt:  ESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

A0A1S3CPG6 uncharacterized protein LOC103503317

5.93e-155

64.85

Show/hide

Query:  NSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---------------EVLLPLKKMKEWLAGRPRGFGEGKEYDTS
        NSTKF  PH  LSL+     +GF VFA K+ G+G   + QP+DSDI+FDEFFDE+E               E+LLPLK  +EW A RPRGFGEGK YDTS
Subjt:  NSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFDEEE---------------EVLLPLKKMKEWLAGRPRGFGEGKEYDTS

Query:  IEDKLLQELEQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAF
        IEDKLLQE+EQ R AQAANINKLKNQ SS+ NSS++V E+ A +I STG  VRI+NLPKKKNI+RDLVVAFK FPGIINI PAV+GNKKTRDPICKGFAF
Subjt:  IEDKLLQELEQSRAAQAANINKLKNQ-SSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAF

Query:  VDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDE
        VDCKSEGDA+              RVQKQIKCE++NR+TS+SA +SSVGST ++   I E EAEQ AD+D DL+ E  RT++E+ E++L  V+E HS D 
Subjt:  VDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDE

Query:  DNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVS
        D+   ESRTE KI+SPS KE+ +I E E IL  G+EEIHRE+ PIK K KVSKKKQPKEKGEKK LTEIPGSAKRLR+KEKAVLTDVYSRYG KSA L+S
Subjt:  DNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVS

Query:  KEGN
        +EG+
Subjt:  KEGN

A0A6J1DEC7 uncharacterized protein LOC111019305

6.66e-285

96.72

Show/hide

Query:  MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLP
        MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLP
Subjt:  MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLP

Query:  LKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGI
        LKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGI
Subjt:  LKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGI

Query:  INIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR--------------VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEV
        INIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR              VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEV
Subjt:  INIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR--------------VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEV

Query:  IRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLR
        IRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLR
Subjt:  IRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLR

Query:  VKEKAVLTDVYSRYGNKSAALVSKEGN
        VKEKAVLTDVYSRYGNKSAALVSKEGN
Subjt:  VKEKAVLTDVYSRYGNKSAALVSKEGN

A0A6J1G3T4 uncharacterized protein LOC111450524

9.22e-160

64.76

Show/hide

Query:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD
        M+DS  LH   RF   W S  HS+   SLLLP  YTA Y L  P NPNSTKF S HF LSLVH P  + F V A KK G+G   +   +DSD EFD   D
Subjt:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD

Query:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL
         + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+EQSR AQAANINKLK+Q  S  NS ++V + +A +I +TG  VRI+NLPKK+NIHRDL
Subjt:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL

Query:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA
        ++AF+ FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDAI              RVQKQIKCE++N++TS SA E SV ST  +   I E EAEQ A
Subjt:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA

Query:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT
        D+D DL+ EV RTRVED+E+NL  VSEL SDDED+   ESRTESKI   S KEL++IHE EE+ P GREE+HRE PPI  K KVSKKKQPKEKGEKKS  
Subjt:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT

Query:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
         IPGSAKRLR+KEKAVLTDVYSRYG KSA L SKEGN
Subjt:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

A0A6J1KJD4 uncharacterized protein LOC111493728

2.99e-160

64.76

Show/hide

Query:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD
        M+DS  LH   RF   W S  HS+   SLLLP   T +Y L  P NPNSTKF S HF LSLVH P  + F VF+ KK G+G   +   +DSDIEFD   D
Subjt:  MVDSASLHLQSRF---WLS--HSKPK-SLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRG---VAQPTDSDIEFDEFFD

Query:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL
         + +E+LLPL  M+EWLA RPRGFGEGKEYDTSIE+KLLQE+EQSR AQAANINKLK+Q  S  NSS++V + +A +I +TG  VR++NLPKK+NIHRDL
Subjt:  -EEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQS-SESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDL

Query:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA
        ++AFK FPGI+NI PAV+GNKKTRDPICKGFAFVDCKSEGDAI              RVQKQIKCE++N++TS  A E SV ST H+   I E +AEQ A
Subjt:  VVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAI--------------RVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDA

Query:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT
        D+D DL+ EV RTRVED+E+NL  VSELHSDD+DN   ESRTESKI  PS KEL++IHE EEI P GREE+HRE PPI  K +VSKKKQPKEKGE KS  
Subjt:  DLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKELERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLT

Query:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN
         IPGSAKRLR+KEKAVLTDVYSRYG KSA L SKEGN
Subjt:  EIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G70200.1 RNA-binding (RRM/RBD/RNP motifs) family protein

1.9e-45

34.32

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Query:  GFHVFAQKKPGRG---VAQPTDSDIEFDEFF------------DEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLK
        GF  FA  K   G   + +  D D E DE +            +E+E   LP+ KMK+WL  +PRGFG GK+Y+T IEDKLL E+EQS  AQAAN+NKLK
Subjt:  GFHVFAQKKPGRG---VAQPTDSDIEFDEFF------------DEEEEVLLPLKKMKEWLAGRPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLK

Query:  NQSSESNSSKSVAE-VKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR-------------
        N   +S   K     +K +     GF VR+ NLPKKKN+HRDL VAFKE  G+++I PAV GNKKT+DP+CKGFA VD K+E DA R             
Subjt:  NQSSESNSSKSVAE-VKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKGFAFVDCKSEGDAIR-------------

Query:  -VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLD--------------KDLSDEVIRTRVEDMEENLVSVS-----------------
         V KQIKC+++   +  S  +         +  +P    E D+  D               D  +EV    VED E N +S S                 
Subjt:  -VQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLD--------------KDLSDEVIRTRVEDMEENLVSVS-----------------

Query:  ---------------------------------ELHSDDEDNEDAESRT----------------------ESKIRSPSRKELERIHEPEEILPNGREEI
                                         E H DDE +E+A + T                       S + S     ++RI   E+ L  G+E++
Subjt:  ---------------------------------ELHSDDEDNEDAESRT----------------------ESKIRSPSRKELERIHEPEEILPNGREEI

Query:  --------HREIPP--IKGKIKVSKKKQP---KEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA
                  E  P  ++GK K  KKK     K + +K +  EIPGS+KRL+VKEKA+LT V  +Y  K A+
Subjt:  --------HREIPP--IKGKIKVSKKKQP---KEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAA

Sequences

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CDS sequence

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ATGATGGTTGATTCTGCGTCCCTCCATCTTCAGAGCCGCTTCTGGCTCTCACACTCAAAACCCAAATCCCTTCTTCTCCCAAAATCGTACACTGCTTTCTACAAACTCCA
CTCACCATCCAATCCCAATTCAACAAAATTCCTCTCACCCCACTTCTGTTTATCGCTTGTTCATGCCCCTCCGCGAATCGGGTTCCATGTTTTTGCACAGAAGAAGCCAG
GGAGAGGCGTCGCTCAACCCACTGACTCCGACATTGAGTTTGATGAATTCTTCGATGAGGAGGAGGAGGTGCTCCTGCCGTTGAAGAAGATGAAGGAGTGGCTTGCGGGA
CGGCCTCGTGGGTTCGGAGAAGGGAAGGAGTACGATACCTCCATTGAAGACAAATTGCTGCAAGAATTGGAGCAGAGTAGGGCAGCTCAGGCTGCTAATATCAATAAGCT
CAAGAACCAGTCTTCCGAGTCCAATTCTAGTAAGAGTGTTGCAGAGGTAAAAGCTTCAGATATTGGTAGTACTGGATTTGGTGTCCGCATTGTCAACCTTCCTAAAAAGA
AGAACATCCACAGAGATCTGGTGGTGGCTTTTAAAGAGTTTCCTGGAATAATCAATATAGTTCCTGCAGTCGTTGGAAACAAGAAGACTAGGGATCCAATCTGCAAGGGT
TTTGCATTTGTTGATTGCAAGTCCGAAGGAGACGCCATAAGAGTACAGAAGCAAATAAAATGTGAGATGATCAATCGACGGACTTCCACTTCTGCTTGTGAAAGCTCAGT
GGGCAGTACCAAGCATGCTCTACCAATTATTCCTGAATATGAAGCAGAGCAGGATGCTGACTTGGACAAGGATTTATCTGATGAAGTTATAAGAACAAGGGTGGAGGATA
TGGAAGAAAATCTGGTATCTGTCAGTGAATTACATTCGGATGATGAGGATAATGAGGATGCAGAATCAAGAACAGAGTCCAAAATTCGGTCACCATCCCGAAAGGAACTA
GAGAGAATCCATGAACCAGAAGAAATTCTTCCTAATGGAAGAGAGGAAATTCATAGGGAAATTCCACCTATTAAAGGGAAAATAAAGGTTTCAAAGAAAAAGCAACCCAA
GGAAAAAGGAGAGAAGAAATCATTGACAGAAATTCCAGGATCTGCAAAAAGGTTAAGAGTAAAGGAGAAGGCCGTGTTAACTGACGTGTACTCAAGATATGGAAATAAAT
CAGCAGCTTTGGTTTCAAAAGAAGGGAACTAA

mRNA sequence

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ATTAGCTTCAGTGGCATTCCTCTCGGGGCTCAGCTGCAGAATGATGGTTGATTCTGCGTCCCTCCATCTTCAGAGCCGCTTCTGGCTCTCACACTCAAAACCCAAATCCC
TTCTTCTCCCAAAATCGTACACTGCTTTCTACAAACTCCACTCACCATCCAATCCCAATTCAACAAAATTCCTCTCACCCCACTTCTGTTTATCGCTTGTTCATGCCCCT
CCGCGAATCGGGTTCCATGTTTTTGCACAGAAGAAGCCAGGGAGAGGCGTCGCTCAACCCACTGACTCCGACATTGAGTTTGATGAATTCTTCGATGAGGAGGAGGAGGT
GCTCCTGCCGTTGAAGAAGATGAAGGAGTGGCTTGCGGGACGGCCTCGTGGGTTCGGAGAAGGGAAGGAGTACGATACCTCCATTGAAGACAAATTGCTGCAAGAATTGG
AGCAGAGTAGGGCAGCTCAGGCTGCTAATATCAATAAGCTCAAGAACCAGTCTTCCGAGTCCAATTCTAGTAAGAGTGTTGCAGAGGTAAAAGCTTCAGATATTGGTAGT
ACTGGATTTGGTGTCCGCATTGTCAACCTTCCTAAAAAGAAGAACATCCACAGAGATCTGGTGGTGGCTTTTAAAGAGTTTCCTGGAATAATCAATATAGTTCCTGCAGT
CGTTGGAAACAAGAAGACTAGGGATCCAATCTGCAAGGGTTTTGCATTTGTTGATTGCAAGTCCGAAGGAGACGCCATAAGAGTACAGAAGCAAATAAAATGTGAGATGA
TCAATCGACGGACTTCCACTTCTGCTTGTGAAAGCTCAGTGGGCAGTACCAAGCATGCTCTACCAATTATTCCTGAATATGAAGCAGAGCAGGATGCTGACTTGGACAAG
GATTTATCTGATGAAGTTATAAGAACAAGGGTGGAGGATATGGAAGAAAATCTGGTATCTGTCAGTGAATTACATTCGGATGATGAGGATAATGAGGATGCAGAATCAAG
AACAGAGTCCAAAATTCGGTCACCATCCCGAAAGGAACTAGAGAGAATCCATGAACCAGAAGAAATTCTTCCTAATGGAAGAGAGGAAATTCATAGGGAAATTCCACCTA
TTAAAGGGAAAATAAAGGTTTCAAAGAAAAAGCAACCCAAGGAAAAAGGAGAGAAGAAATCATTGACAGAAATTCCAGGATCTGCAAAAAGGTTAAGAGTAAAGGAGAAG
GCCGTGTTAACTGACGTGTACTCAAGATATGGAAATAAATCAGCAGCTTTGGTTTCAAAAGAAGGGAACTAACTGGCTGGAGTGAATTAAGAATGTAAGACCTTAACCAG
AAACTGATAGGAGATGTGATTGCAATTGCATAAACATGATTTTCTGGGTGATTATTCCAATCAAATTTGTTCAGTCAGAGCTCCCTATGGGCTTCTTTTATGGAGTAGGG
TGCTAATATTTTGGTCAAGTTCCAACTTCTAGCTCATCCCCTTGCCAAATTCATGGTTCATTGACTGTAATAGTATCTAATGTAGGGCCTAATTCATTTGTTCAATTTGG
TTTTTCTCATTTTATGTGCCGCAGCAGATCAGTGGATGCAGACGAAGGACACATCGACAGTCGCGTCTCTCGCCCCGTCTCGTGTATTGACGATTTGAAGACAAATTCTG
GTAAATAATGAGAATTAACGGGTTAAACTAGTTGGAATGAAGTGACTTTTGTCTAGGAAGCAATGTGGAGCTGGTAGAGACATTACTGGAGTTCACCACAATGTGACTGA
CATTACTTCTCCGTTAGATTTATGAGAAAAATCGAAAAAATACCTTAAATGTATATCCAGTGGTTGGTTGGTAGGGAGACGAAGATTTTCGAATCAGCGTCTAGTGGTTA
TCAAGGGACAGCGACACTGCGGTAGCTTCATTCAATAATTTTTTGGAGTTGGTAATAGTTCAAGTGTTTCTCTAGTTCATTGGTTGGGTTAATGGATGTTTTTACTTTAG
TTTGTAAAATTAATTTTACCATCCAAGTAAATCCTACAAATCCATTTCCATTCCTACTTTATGTAGGCAAAGGTTCATAGCAGTTGGCTGTAGTTTGACAACTTATTGCA
TTTTC

Protein sequence

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MMVDSASLHLQSRFWLSHSKPKSLLLPKSYTAFYKLHSPSNPNSTKFLSPHFCLSLVHAPPRIGFHVFAQKKPGRGVAQPTDSDIEFDEFFDEEEEVLLPLKKMKEWLAG
RPRGFGEGKEYDTSIEDKLLQELEQSRAAQAANINKLKNQSSESNSSKSVAEVKASDIGSTGFGVRIVNLPKKKNIHRDLVVAFKEFPGIINIVPAVVGNKKTRDPICKG
FAFVDCKSEGDAIRVQKQIKCEMINRRTSTSACESSVGSTKHALPIIPEYEAEQDADLDKDLSDEVIRTRVEDMEENLVSVSELHSDDEDNEDAESRTESKIRSPSRKEL
ERIHEPEEILPNGREEIHREIPPIKGKIKVSKKKQPKEKGEKKSLTEIPGSAKRLRVKEKAVLTDVYSRYGNKSAALVSKEGN

MC00g0666 (gene) of Bitter gourd (Dali-11) v1 genome