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MC00g0692 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g0692
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRab5-interacting
Genome locationscaffold280:260691..260905
RNA-Seq ExpressionMC00g0692
SyntenyMC00g0692
Gene Ontology termsGO:0006996 - organelle organization (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010742 - Rab5-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067751.1 Rab5-interacting [Cucumis melo var. makuwa]1.08e-3076.81Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        T+ +NSQ  HQNGHLPPFK A+LFDP TSWDKDQLGDVLH      AL+CGLLWGSIPL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]4.83e-3176.81Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        T+ +NSQ  HQNGHLPPFK A+LFDP TSWDKDQLGDVLH      AL+CGLLWGSIPL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]1.13e-2973.91Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        +I +NSQ  HQNGHLPPFK A LFDP  SWDKDQLGDVLH      AL+CGLLWGS+PL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

XP_031122916.1 uncharacterized protein RAB5IF homolog [Ipomoea triloba]5.94e-3068.42Show/hide
Query:  MKEIPLGTINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        MKE      NL +Q HH NGHL PFKFAKLFDP+ SWDKDQLGDVLH     +ALLCGL+WG+IPL+GG WF+LFL
Subjt:  MKEIPLGTINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]1.38e-3076.81Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        +  +NSQ  HQNGHLPPFK AKLFDP TSWDKDQLGDVLH      AL+CGLLWGSIPL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

TrEMBL top hitse value%identityAlignment
A0A1S3C692 uncharacterized protein C20orf24 homolog2.34e-3176.81Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        T+ +NSQ  HQNGHLPPFK A+LFDP TSWDKDQLGDVLH      AL+CGLLWGSIPL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

A0A5A7VQ84 Rab5-interacting5.22e-3176.81Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        T+ +NSQ  HQNGHLPPFK A+LFDP TSWDKDQLGDVLH      AL+CGLLWGSIPL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

A0A6J1G9S8 uncharacterized protein C20orf24 homolog5.47e-3073.91Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        +I +NSQ  HQNGHLPPFK A LFDP  SWDKDQLGDVLH      AL+CGLLWGS+PL+GGIWFILFL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

A0A6J1KGG2 uncharacterized protein C20orf24 homolog1.56e-2972.46Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        +I +NSQ  HQNGHLPPFK A LFDP  SWDKDQLGDVLH      AL+CGLLWGS+PL+GGIWFI+FL
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

A0A803PUU3 Uncharacterized protein4.52e-2870.15Show/hide
Query:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFIL
        ++ LN Q +HQNGHL PFKFAKLFDP  SWDKDQLGDVLH      AL+CGLLWG+IPL+GGIWF++
Subjt:  TINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29020.1 Rab5-interacting family protein9.0e-2066.15Show/hide
Query:  NSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        + Q +HQN HL  F FAKLFD   SWDKDQLGDVLH       LLCGLLWG+IPL+GGIW +LFL
Subjt:  NSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL

AT5G59410.1 Rab5-interacting family protein8.2e-2163.64Show/hide
Query:  MKEIPLGTIN-LNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL
        MKE     +N L  Q +HQN HL P K AKLFDP+ SWDKDQLGDVLH       L+ GLLWGSIPL+GGIW ILFL
Subjt:  MKEIPLGTIN-LNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLH-----SALLCGLLWGSIPLIGGIWFILFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAATACCCTTGGGTACGATAAACCTTAATTCTCAATTCCACCACCAGAACGGTCACTTGCCACCCTTTAAGTTCGCCAAATTGTTCGATCCAAACACTTCCTG
GGATAAGGATCAACTAGGAGATGTGCTGCATTCGGCGCTTTTATGTGGGCTGCTATGGGGTTCCATACCTCTAATTGGCGGCATATGGTTCATTTTATTCTTG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAATACCCTTGGGTACGATAAACCTTAATTCTCAATTCCACCACCAGAACGGTCACTTGCCACCCTTTAAGTTCGCCAAATTGTTCGATCCAAACACTTCCTG
GGATAAGGATCAACTAGGAGATGTGCTGCATTCGGCGCTTTTATGTGGGCTGCTATGGGGTTCCATACCTCTAATTGGCGGCATATGGTTCATTTTATTCTTG
Protein sequenceShow/hide protein sequence
MKEIPLGTINLNSQFHHQNGHLPPFKFAKLFDPNTSWDKDQLGDVLHSALLCGLLWGSIPLIGGIWFILFL