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MC00g_new1002 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC00g_new1002
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Genome locationscaffold60:692818..694096
RNA-Seq ExpressionMC00g_new1002
SyntenyMC00g_new1002
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154847.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111022007 [Momordica charantia]6.95e-4179.59Show/hide
Query:  KSLAGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDELRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS
        + LAGVE  DA+VV PKKP  S+R+VRGY IVREED PITAADPETRGVVTREQYDELRH+YELLLVTQ ATC FLKK+YGD A SFPDE  ADLPSS
Subjt:  KSLAGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDELRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS

XP_022156935.1 uncharacterized protein LOC111023761 [Momordica charantia]7.65e-0867.44Show/hide
Query:  VTGDSEHGIEPLEHLDSPTVEIHCQIASGTILEDTPPATLQAI
        V+GDSEH +EPLEH DS TV+I CQIA  TI+ +TPPATLQ +
Subjt:  VTGDSEHGIEPLEHLDSPTVEIHCQIASGTILEDTPPATLQAI

XP_022158483.1 uncharacterized protein LOC111024964 [Momordica charantia]7.56e-0973.81Show/hide
Query:  GVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPET
        G++ +D DVVTPKK  TS+RRVRGYLIVREED  IT ADPET
Subjt:  GVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPET

XP_022159289.1 uncharacterized protein LOC111025702 [Momordica charantia]6.11e-4379.59Show/hide
Query:  AGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDE---LRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS
        AGVE D  DVV  KK  TSIRRVRGYLIVREED PITAADP+TRGVVTREQYDE   LRH Y+LL  TQHATCEFLKKLYGDGA S PDE  ADLPSS
Subjt:  AGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDE---LRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS

TrEMBL top hitse value%identityAlignment
A0A6J1DMT3 LOW QUALITY PROTEIN: uncharacterized protein LOC1110220073.37e-4179.59Show/hide
Query:  KSLAGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDELRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS
        + LAGVE  DA+VV PKKP  S+R+VRGY IVREED PITAADPETRGVVTREQYDELRH+YELLLVTQ ATC FLKK+YGD A SFPDE  ADLPSS
Subjt:  KSLAGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDELRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS

A0A6J1DRR9 uncharacterized protein LOC1110237613.71e-0867.44Show/hide
Query:  VTGDSEHGIEPLEHLDSPTVEIHCQIASGTILEDTPPATLQAI
        V+GDSEH +EPLEH DS TV+I CQIA  TI+ +TPPATLQ +
Subjt:  VTGDSEHGIEPLEHLDSPTVEIHCQIASGTILEDTPPATLQAI

A0A6J1DW79 uncharacterized protein LOC1110249643.66e-0973.81Show/hide
Query:  GVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPET
        G++ +D DVVTPKK  TS+RRVRGYLIVREED  IT ADPET
Subjt:  GVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPET

A0A6J1E204 uncharacterized protein LOC1110257022.96e-4379.59Show/hide
Query:  AGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDE---LRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS
        AGVE D  DVV  KK  TSIRRVRGYLIVREED PITAADP+TRGVVTREQYDE   LRH Y+LL  TQHATCEFLKKLYGDGA S PDE  ADLPSS
Subjt:  AGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDE---LRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGCTCCTCCTCCTCCAAGCCATGCAACAAAGATAAGGGGAAGAAGAAGGTGATGCTACCACCTCCTACTCCACCGGAGTTGTCTATCGTTCCCCCTATT
TCCGCTACTGTTGCTATGGATGTAAAAGGTCAAGAACATGTTACTGGTGATTCAGAGCACGGCATAGAGCCATTGGAGCACTTAGATTCTCCCACGGTCGAAATA
CATTGCCAAATTGCGTCTGGCACAATTTTGGAAGATACTCCACCAGCCACTCTACAAGCTATTCCATCTCCCACTTTTCCAGATCTTACTTTGACTAAAAAGTCC
TTAGCAGGAGTGGAGGTTGATGATGCAGATGTAGTAACGCCCAAGAAGCCAGTCACGTCCATAAGGAGAGTTCGGGGATATTTGATTGTTCGGGAGGAAGACTTT
CCCATTACTGCTGCGGATCCTGAAACCCGAGGTGTGGTGACTAGGGAGCAATATGACGAGCTAAGGCACCAGTACGAGCTTCTCTTGGTTACTCAACATGCAACA
TGTGAGTTTCTAAAGAAGTTATATGGTGATGGAGCATCTTCCTTCCCTGATGAGTTTATGGCCGATTTACCCTCTTCTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGGCTCCTCCTCCTCCAAGCCATGCAACAAAGATAAGGGGAAGAAGAAGGTGATGCTACCACCTCCTACTCCACCGGAGTTGTCTATCGTTCCCCCTATT
TCCGCTACTGTTGCTATGGATGTAAAAGGTCAAGAACATGTTACTGGTGATTCAGAGCACGGCATAGAGCCATTGGAGCACTTAGATTCTCCCACGGTCGAAATA
CATTGCCAAATTGCGTCTGGCACAATTTTGGAAGATACTCCACCAGCCACTCTACAAGCTATTCCATCTCCCACTTTTCCAGATCTTACTTTGACTAAAAAGTCC
TTAGCAGGAGTGGAGGTTGATGATGCAGATGTAGTAACGCCCAAGAAGCCAGTCACGTCCATAAGGAGAGTTCGGGGATATTTGATTGTTCGGGAGGAAGACTTT
CCCATTACTGCTGCGGATCCTGAAACCCGAGGTGTGGTGACTAGGGAGCAATATGACGAGCTAAGGCACCAGTACGAGCTTCTCTTGGTTACTCAACATGCAACA
TGTGAGTTTCTAAAGAAGTTATATGGTGATGGAGCATCTTCCTTCCCTGATGAGTTTATGGCCGATTTACCCTCTTCTTTCTGA
Protein sequenceShow/hide protein sequence
MEGSSSSKPCNKDKGKKKVMLPPPTPPELSIVPPISATVAMDVKGQEHVTGDSEHGIEPLEHLDSPTVEIHCQIASGTILEDTPPATLQAIPSPTFPDLTLTKKS
LAGVEVDDADVVTPKKPVTSIRRVRGYLIVREEDFPITAADPETRGVVTREQYDELRHQYELLLVTQHATCEFLKKLYGDGASSFPDEFMADLPSSF