; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0007 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0007
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase CHFR
Genome locationMC01:520380..520837
RNA-Seq ExpressionMC01g0007
SyntenyMC01g0007
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022967796.1 E3 ubiquitin-protein ligase CHFR isoform X3 [Cucurbita maxima]8.23e-5794.57Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDS ICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

XP_023543045.1 E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita pepo subsp. pepo]8.47e-5895.65Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDSRICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

XP_023543046.1 E3 ubiquitin-protein ligase CHFR isoform X2 [Cucurbita pepo subsp. pepo]7.08e-5895.65Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDSRICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

XP_023543047.1 E3 ubiquitin-protein ligase CHFR isoform X3 [Cucurbita pepo subsp. pepo]5.27e-5895.65Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDSRICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

XP_038887863.1 E3 ubiquitin-protein ligase CHFR [Benincasa hispida]6.62e-5793.48Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKF++LS SRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQF GRNH+L NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

TrEMBL top hitse value%identityAlignment
A0A6J1EYT0 E3 ubiquitin-protein ligase CHFR isoform X33.98e-5792.39Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDS++CKGLKIS+DVEH KCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

A0A6J1F3R3 E3 ubiquitin-protein ligase CHFR isoform X25.33e-5792.39Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDS++CKGLKIS+DVEH KCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

A0A6J1HT32 E3 ubiquitin-protein ligase CHFR isoform X33.98e-5794.57Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDS ICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

A0A6J1HW48 E3 ubiquitin-protein ligase CHFR isoform X16.36e-5794.57Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDS ICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

A0A6J1HXR4 E3 ubiquitin-protein ligase CHFR isoform X25.33e-5794.57Show/hide
Query:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        GHLSYKFEILSDS ICKGLKIS+DVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEK TSVLCPQCRAVVQF GRNHFL NIAE
Subjt:  GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

SwissProt top hitse value%identityAlignment
Q5FWP4 E3 ubiquitin-protein ligase CHFR1.6e-1037.8Show/hide
Query:  SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        SD      +K     E   C IC  + HD V+  PC H FC  C+S W++RS       LCP CR  V+   +NH L N+ E
Subjt:  SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

Q5RF77 E3 ubiquitin-protein ligase CHFR1.6e-1041.79Show/hide
Query:  EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        E   C IC ++ HD V+  PC H FC  C+S W++RS       LCP CR  V+   +NH L N+ E
Subjt:  EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

Q6P256 E3 ubiquitin-protein ligase CHFR1.6e-1037.8Show/hide
Query:  SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        SD      +K     E   C IC  + HD V+  PC H FC  C+S W++RS       LCP CR  V+   +NH L N+ E
Subjt:  SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

Q810L3 E3 ubiquitin-protein ligase CHFR1.6e-1041.79Show/hide
Query:  EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        E   C IC ++ HD V+  PC H FC  C+S W++RS       LCP CR  V+   +NH L N+ E
Subjt:  EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

Q96EP1 E3 ubiquitin-protein ligase CHFR1.6e-1041.79Show/hide
Query:  EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        E   C IC ++ HD V+  PC H FC  C+S W++RS       LCP CR  V+   +NH L N+ E
Subjt:  EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

Arabidopsis top hitse value%identityAlignment
AT1G47570.1 RING/U-box superfamily protein2.3e-3669.15Show/hide
Query:  GHLSYKFEIL--SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        G+L Y+F I+   +SR  + L+IS+D EHAKCSICLNIWHDVVTAAPC HNFCNGCFSEW++RS+EKH  VLCPQCR  VQ+ G+NHFL+NI E
Subjt:  GHLSYKFEIL--SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

AT1G47570.2 RING/U-box superfamily protein2.3e-3669.15Show/hide
Query:  GHLSYKFEIL--SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE
        G+L Y+F I+   +SR  + L+IS+D EHAKCSICLNIWHDVVTAAPC HNFCNGCFSEW++RS+EKH  VLCPQCR  VQ+ G+NHFL+NI E
Subjt:  GHLSYKFEIL--SDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE

AT3G05250.1 RING/U-box superfamily protein3.1e-0434Show/hide
Query:  CSICLNIWHDVVTAAPCFHNFCNGCFSEWLK----RSQEKHTSVLCPQCR
        C ICL  +        CFH FC  C  +W+K    ++ ++ +SV CP C+
Subjt:  CSICLNIWHDVVTAAPCFHNFCNGCFSEWLK----RSQEKHTSVLCPQCR

AT4G05350.1 RING/U-box superfamily protein6.9e-0441.94Show/hide
Query:  SVDVEHAKCSICLNIWHD-----VVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVV
        S+ +E   CSICL           VT   C H F NGC  EWLKR   K+T   CP CR  +
Subjt:  SVDVEHAKCSICLNIWHD-----VVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGATTTCTGTGGATGTTGAGCACGCAAAATGTAGTATTTGCTTAAACATATG
GCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTCTGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCATACAAGTGTACTTTGTCCCCAGT
GTAGAGCAGTTGTGCAATTTGCTGGAAGAAACCATTTCTTGCAGAACATTGCGGAG
mRNA sequenceShow/hide mRNA sequence
GGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGATTTCTGTGGATGTTGAGCACGCAAAATGTAGTATTTGCTTAAACATATG
GCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTCTGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCATACAAGTGTACTTTGTCCCCAGT
GTAGAGCAGTTGTGCAATTTGCTGGAAGAAACCATTTCTTGCAGAACATTGCGGAG
Protein sequenceShow/hide protein sequence
GHLSYKFEILSDSRICKGLKISVDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKHTSVLCPQCRAVVQFAGRNHFLQNIAE