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MC01g0014 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0014
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC01:1049697..1049929
RNA-Seq ExpressionMC01g0014
SyntenyMC01g0014
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039950.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.71e-0941.98Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ R +      P +   +LYK +W    PKK  FF+W L H  INT D+LQ RLP   LSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.51e-1143.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ ++L+     P +   SLYK +W    PKK  FF+W L H  INT D+LQ RLP   LSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

KAA0044451.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.78e-1043.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ + L+     P +   +LYK +W    PKK  FF+W L H  INT D+LQ RLP  ALSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]5.49e-1143.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ ++L+     P +   SLYK +W    PKK  FF+W L H  INT D+LQ RLP   LSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

TYK29578.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.76e-1043.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ + L+     P +   +LYK +W    PKK  FF+W L H  INT D+LQ RLP  ALSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

TrEMBL top hitse value%identityAlignment
A0A5A7T9I7 LINE-1 retrotransposable element ORF2 protein8.29e-1041.98Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ R +      P +   +LYK +W    PKK  FF+W L H  INT D+LQ RLP   LSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein2.67e-1143.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ ++L+     P +   SLYK +W    PKK  FF+W L H  INT D+LQ RLP   LSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.66e-1143.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ ++L+     P +   SLYK +W    PKK  FF+W L H  INT D+LQ RLP   LSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

A0A5A7TSA7 LINE-1 retrotransposable element ORF2 protein2.32e-1043.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ + L+     P +   +LYK +W    PKK  FF+W L H  INT D+LQ RLP  ALSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

A0A5D3E1E3 LINE-1 retrotransposable element ORF2 protein2.30e-1043.21Show/hide
Query:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH
        F T S+ + L+     P +   +LYK +W    PKK  FF+W L H  INT D+LQ RLP  ALSP WC +C    E   H
Subjt:  FSTCSLTRNLTHRGQIPRS---SLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQ-RLPYMALSPQWCTVCKVRLETQVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTCCACATGCTCTCTCACTAGGAATCTCACACACCGAGGCCAAATCCCCCGATCTAGTCTCTACAAAGCTATTTGGATGGGTATCTGCCCAAAAAAAGTATGCTTTTT
TCTTTGGGAGCTTAGCCACCACACCATCAACACAAATGACAAGCTACAAAGGCTCCCCTACATGGCTCTTTCTCCACAGTGGTGTACCGTTTGCAAGGTCAGATTGGAAA
CACAAGTGCAC
mRNA sequenceShow/hide mRNA sequence
TTTTCCACATGCTCTCTCACTAGGAATCTCACACACCGAGGCCAAATCCCCCGATCTAGTCTCTACAAAGCTATTTGGATGGGTATCTGCCCAAAAAAAGTATGCTTTTT
TCTTTGGGAGCTTAGCCACCACACCATCAACACAAATGACAAGCTACAAAGGCTCCCCTACATGGCTCTTTCTCCACAGTGGTGTACCGTTTGCAAGGTCAGATTGGAAA
CACAAGTGCAC
Protein sequenceShow/hide protein sequence
FSTCSLTRNLTHRGQIPRSSLYKAIWMGICPKKVCFFLWELSHHTINTNDKLQRLPYMALSPQWCTVCKVRLETQVH