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MC01g0020 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0020
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC01:1618878..1619126
RNA-Seq ExpressionMC01g0020
SyntenyMC01g0020
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAA10891.1 ribonuclease (RNase LC1) [Luffa aegyptiaca]1.60e-1346.99Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M N +DLL+  R+  +  N  +K    V+ AI+ Q G EPVL  +    Q+ L+EIVMCFD DGVTLI+ +P+ SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
KAA0053769.1 ribonuclease MC-like [Cucumis melo var. makuwa]5.89e-1142.86Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M + +DLL+  R   +  N  +K    V  AI   F  +P+L  K A+  Q LL EIV+CFD DGVTLI+ + ++SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
XP_004147499.1 ribonuclease MC [Cucumis sativus]1.68e-1347.62Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M +G+DLL+  R   +G N  +K    V  AI   FG +P+L  K A+  Q LL EIVMCFD DGVTLI+ + ++SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
XP_022142280.1 ribonuclease MC-like [Momordica charantia]1.64e-1448.19Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M + LDL+   R+  L  N  TK+   V+ AI+ QFG EPVL  +       L+EIVMCFD DGVTLI+ +P+ SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
XP_022155091.1 ribonuclease MC-like [Momordica charantia]2.47e-1243.37Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M N +DL+   ++  L  N  +K+   V+ A++  FG EPVL  +   +   L+EIVMCFD DGVTLI+ +P  SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
TrEMBL top hitse value%identityAlignment
A0A0A0LC37 Ribonuclease T(2)8.12e-1447.62Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M +G+DLL+  R   +G N  +K    V  AI   FG +P+L  K A+  Q LL EIVMCFD DGVTLI+ + ++SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
A0A5A7UJY4 Ribonuclease MC-like2.85e-1142.86Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M + +DLL+  R   +  N  +K    V  AI   F  +P+L  K A+  Q LL EIV+CFD DGVTLI+ + ++SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATT-QTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
A0A6J1CKH7 Ribonuclease T(2)7.95e-1548.19Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M + LDL+   R+  L  N  TK+   V+ AI+ QFG EPVL  +       L+EIVMCFD DGVTLI+ +P+ SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
A0A6J1DQN7 ribonuclease MC-like1.20e-1243.37Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M N +DL+   ++  L  N  +K+   V+ A++  FG EPVL  +   +   L+EIVMCFD DGVTLI+ +P  SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
Q40115 Ribonuclease (RNase LC1)7.73e-1446.99Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        I+M N +DLL+  R+  +  N  +K    V+ AI+ Q G EPVL  +    Q+ L+EIVMCFD DGVTLI+ +P+ SNC  SF
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
SwissProt top hitse value%identityAlignment
P23540 Ribonuclease MC7.1e-0534.12Show/hide
Query:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKI--ATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
        +DM N  D++   R    G N  TK+  +++  +K +FG  P L  +    T  + LV++V CF  DG TLID   ++  CG +F
Subjt:  IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKI--ATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATAGATATGATTAATGGTCTCGACCTTCTTGCTACCTGCAGACTTGCTAGGCTAGGGTCAAACTATAACACGAAGACAGTAGCAAGCGTACGATACGCAATCAAAATGCA
ATTCGGGACCGAACCAGTTCTTCACAACAAAATAGCTACTACACAAACCCTATTAGTGGAAATTGTGATGTGTTTCGATGTAGATGGTGTCACTCTTATTGATTTTGATC
CTTCCAAATCCAATTGTGGTTACTCGTTC
mRNA sequenceShow/hide mRNA sequence
ATAGATATGATTAATGGTCTCGACCTTCTTGCTACCTGCAGACTTGCTAGGCTAGGGTCAAACTATAACACGAAGACAGTAGCAAGCGTACGATACGCAATCAAAATGCA
ATTCGGGACCGAACCAGTTCTTCACAACAAAATAGCTACTACACAAACCCTATTAGTGGAAATTGTGATGTGTTTCGATGTAGATGGTGTCACTCTTATTGATTTTGATC
CTTCCAAATCCAATTGTGGTTACTCGTTC
Protein sequenceShow/hide protein sequence
IDMINGLDLLATCRLARLGSNYNTKTVASVRYAIKMQFGTEPVLHNKIATTQTLLVEIVMCFDVDGVTLIDFDPSKSNCGYSF