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MC01g0021 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0021
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibonuclease T(2)
Genome locationMC01:1619559..1619871
RNA-Seq ExpressionMC01g0021
SyntenyMC01g0021
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0033897 - ribonuclease T2 activity (molecular function)
InterPro domainsIPR001568 - Ribonuclease T2-like
IPR036430 - Ribonuclease T2-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAA10891.1 ribonuclease (RNase LC1) [Luffa aegyptiaca]1.67e-2150Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS
        WG EWNKH IC VSKF+Q  YFQ++IN+ N +DL+  L +  +  N  +K    V+ AI+ Q   E VLRC+ T  Q+ L+EIVMCFD D V+LI+C+ +
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS

Query:  KSNC
         SNC
Subjt:  KSNC
KAA0053769.1 ribonuclease MC-like [Cucumis melo var. makuwa]5.40e-1843.81Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKI-THTQTILVEIVMCFDVD-VSLIDCDH
        WG EWNKH IC  SKF+Q  YFQ +IN+ + +DL+ +L    +  N  +K    V  AI   +  + +LRCK  ++ Q +L EIV+CFD D V+LI+C+ 
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKI-THTQTILVEIVMCFDVD-VSLIDCDH

Query:  SKSNC
        ++SNC
Subjt:  SKSNC
XP_004147499.1 ribonuclease MC [Cucumis sativus]2.17e-1945.71Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCK-ITHTQTILVEIVMCFDVD-VSLIDCDH
        WG EWNKH IC  SKF++  YFQ +IN+ +G+DL+ +L    +G N  +K    V  AI   +  + +LRCK  ++ Q +L EIVMCFD D V+LI+C+ 
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCK-ITHTQTILVEIVMCFDVD-VSLIDCDH

Query:  SKSNC
        ++SNC
Subjt:  SKSNC
XP_022142280.1 ribonuclease MC-like [Momordica charantia]1.06e-2049.04Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS
        WG EWNKH IC  SKF+   YFQ++IN+ + LDL+  L +  L  N  TK+   V+ AI+ Q+  E VLRC+ T     L+EIVMCFD D V+LI+C+ +
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS

Query:  KSNC
         SNC
Subjt:  KSNC
XP_022155091.1 ribonuclease MC-like [Momordica charantia]1.18e-1845.19Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS
        W  EWNKH +C  SKFN   YFQ++IN+ N +DL+  L +  L  N  +K+   V+ A++  +  E VLRC+ T +   L+EIVMCFD D V+LI+C+  
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS

Query:  KSNC
         SNC
Subjt:  KSNC
TrEMBL top hitse value%identityAlignment
A0A0A0LC37 Ribonuclease T(2)1.05e-1945.71Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCK-ITHTQTILVEIVMCFDVD-VSLIDCDH
        WG EWNKH IC  SKF++  YFQ +IN+ +G+DL+ +L    +G N  +K    V  AI   +  + +LRCK  ++ Q +L EIVMCFD D V+LI+C+ 
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCK-ITHTQTILVEIVMCFDVD-VSLIDCDH

Query:  SKSNC
        ++SNC
Subjt:  SKSNC
A0A5A7UJY4 Ribonuclease MC-like2.61e-1843.81Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKI-THTQTILVEIVMCFDVD-VSLIDCDH
        WG EWNKH IC  SKF+Q  YFQ +IN+ + +DL+ +L    +  N  +K    V  AI   +  + +LRCK  ++ Q +L EIV+CFD D V+LI+C+ 
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKI-THTQTILVEIVMCFDVD-VSLIDCDH

Query:  SKSNC
        ++SNC
Subjt:  SKSNC
A0A6J1CKH7 Ribonuclease T(2)5.13e-2149.04Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS
        WG EWNKH IC  SKF+   YFQ++IN+ + LDL+  L +  L  N  TK+   V+ AI+ Q+  E VLRC+ T     L+EIVMCFD D V+LI+C+ +
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS

Query:  KSNC
         SNC
Subjt:  KSNC
A0A6J1DQN7 ribonuclease MC-like5.71e-1945.19Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS
        W  EWNKH +C  SKFN   YFQ++IN+ N +DL+  L +  L  N  +K+   V+ A++  +  E VLRC+ T +   L+EIVMCFD D V+LI+C+  
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS

Query:  KSNC
         SNC
Subjt:  KSNC
Q40115 Ribonuclease (RNase LC1)8.10e-2250Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS
        WG EWNKH IC VSKF+Q  YFQ++IN+ N +DL+  L +  +  N  +K    V+ AI+ Q   E VLRC+ T  Q+ L+EIVMCFD D V+LI+C+ +
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVD-VSLIDCDHS

Query:  KSNC
         SNC
Subjt:  KSNC
SwissProt top hitse value%identityAlignment
P23540 Ribonuclease MC1.7e-0838Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQT---ILVEIVMCFDVDVS-LIDC
        W  EW KH  C  S FNQ  YF++++++ N  D+I  L     G N  TK+  +++  +K ++     LRC+ T  QT    LV++V CF  D S LIDC
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQT---ILVEIVMCFDVDVS-LIDC
Arabidopsis top hitse value%identityAlignment
AT1G14210.1 Ribonuclease T2 family protein5.9e-0431.67Show/hide
Query:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIK
        W  EWNKH  C+ S F+Q++YF+ ++   + + L+ IL    +  N    ++  +++AIK
Subjt:  WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TGGGGTGGAGAGTGGAATAAGCATGAGATTTGCTTAGTGAGTAAGTTTAATCAAAACACATACTTTCAAATATCCATTAATATAATTAATGGTCTCGACCTTATTGTTAT
CCTCACACTTGCTAGGCTAGGGTCAAACCATAACACGAAGACAGTTGCAAGCGTGCGACATGCAATCAAAATGCAATATGAGGCAGAACTAGTTCTTCGTTGCAAAATAA
CTCATACACAAACCATATTAGTGGAGATTGTGATGTGTTTTGATGTAGATGTCAGTCTTATTGATTGCGATCATTCCAAATCCAATTGT
mRNA sequenceShow/hide mRNA sequence
TGGGGTGGAGAGTGGAATAAGCATGAGATTTGCTTAGTGAGTAAGTTTAATCAAAACACATACTTTCAAATATCCATTAATATAATTAATGGTCTCGACCTTATTGTTAT
CCTCACACTTGCTAGGCTAGGGTCAAACCATAACACGAAGACAGTTGCAAGCGTGCGACATGCAATCAAAATGCAATATGAGGCAGAACTAGTTCTTCGTTGCAAAATAA
CTCATACACAAACCATATTAGTGGAGATTGTGATGTGTTTTGATGTAGATGTCAGTCTTATTGATTGCGATCATTCCAAATCCAATTGT
Protein sequenceShow/hide protein sequence
WGGEWNKHEICLVSKFNQNTYFQISINIINGLDLIVILTLARLGSNHNTKTVASVRHAIKMQYEAELVLRCKITHTQTILVEIVMCFDVDVSLIDCDHSKSNC