; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0052 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0052
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-directed DNA polymerase
Genome locationMC01:3849782..3850535
RNA-Seq ExpressionMC01g0052
SyntenyMC01g0052
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149355.1 uncharacterized protein LOC111017796 isoform X1 [Momordica charantia]1.97e-86100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

XP_022149356.1 uncharacterized protein LOC111017796 isoform X2 [Momordica charantia]1.41e-86100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

XP_022149357.1 uncharacterized protein LOC111017796 isoform X3 [Momordica charantia]1.18e-86100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

XP_022149358.1 uncharacterized protein LOC111017796 isoform X4 [Momordica charantia]6.84e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

XP_022149361.1 uncharacterized protein LOC111017796 isoform X6 [Momordica charantia]4.81e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

TrEMBL top hitse value%identityAlignment
A0A6J1D5H5 DNA-directed DNA polymerase9.56e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

A0A6J1D6K2 DNA-directed DNA polymerase3.31e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

A0A6J1D7Q6 DNA-directed DNA polymerase5.73e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

A0A6J1D847 uncharacterized protein LOC111017796 isoform X26.81e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

A0A6J1D854 uncharacterized protein LOC111017796 isoform X62.33e-87100Show/hide
Query:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
        MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ
Subjt:  MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQ

Query:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
        DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL
Subjt:  DSLPNSLLHKEEIGIDSPSDARVMLIDGTSIIYRAYYKLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52050.1 5'-3' exonuclease family protein5.6e-0542.11Show/hide
Query:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL
        S  S SL +S K YCSS      +N   S +T    S            +D  P S+ +  K E  + S    S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL

AT3G52050.2 5'-3' exonuclease family protein5.6e-0542.11Show/hide
Query:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL
        S  S SL +S K YCSS      +N   S +T    S            +D  P S+ +  K E  + S    S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL

AT3G52050.3 5'-3' exonuclease family protein5.6e-0542.11Show/hide
Query:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL
        S  S SL +S K YCSS      +N   S +T    S            +D  P S+ +  K E  + S    S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL

AT3G52050.4 5'-3' exonuclease family protein5.6e-0542.11Show/hide
Query:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL
        S  S SL +S K YCSS      +N   S +T    S            +D  P S+ +  K E  + S    S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL

AT3G52050.5 5'-3' exonuclease family protein5.6e-0542.11Show/hide
Query:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL
        S  S SL +S K YCSS      +N   S +T    S            +D  P S+ +  K E  + S    S+ RVMLIDGTSIIYRAYYKLL
Subjt:  SFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLH--KEEIGIDS---PSDARVMLIDGTSIIYRAYYKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTGCCACCATCTGCATAGTGCGACTGCGACTGCAACTGCGTCTCACATTTGCAGAAATTTCTTGGGATACATTTTCACCTCCAGATATGCTTCTCCTCTTCGTTC
CTCTTCTTCTTCTTTGAAGATACAGTCTCTCCTTCACCATTCTTTTCCTTCTTTCTCCCTTCTGCAATCCCCCAAGGGTTACTGTAGTTCATCCGGAGGTGTAAATGCTG
CCAATCCTGTAGATAGCAATGCAACTTATCATGGTAGTAGTTCTGCATCTTCTAAAAGCCAGCAAATGCTGCAATTTCAAGATTCATTGCCAAATTCGCTCTTGCACAAA
GAAGAAATTGGAATTGATAGTCCTTCAGATGCTAGAGTCATGCTCATTGATGGCACATCAATCATTTATAGAGCATATTACAAGCTTTTG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTGCCACCATCTGCATAGTGCGACTGCGACTGCAACTGCGTCTCACATTTGCAGAAATTTCTTGGGATACATTTTCACCTCCAGATATGCTTCTCCTCTTCGTTC
CTCTTCTTCTTCTTTGAAGATACAGTCTCTCCTTCACCATTCTTTTCCTTCTTTCTCCCTTCTGCAATCCCCCAAGGGTTACTGTAGTTCATCCGGAGGTGTAAATGCTG
CCAATCCTGTAGATAGCAATGCAACTTATCATGGTAGTAGTTCTGCATCTTCTAAAAGCCAGCAAATGCTGCAATTTCAAGATTCATTGCCAAATTCGCTCTTGCACAAA
GAAGAAATTGGAATTGATAGTCCTTCAGATGCTAGAGTCATGCTCATTGATGGCACATCAATCATTTATAGAGCATATTACAAGCTTTTG
Protein sequenceShow/hide protein sequence
MACHHLHSATATATASHICRNFLGYIFTSRYASPLRSSSSSLKIQSLLHHSFPSFSLLQSPKGYCSSSGGVNAANPVDSNATYHGSSSASSKSQQMLQFQDSLPNSLLHK
EEIGIDSPSDARVMLIDGTSIIYRAYYKLL