; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0090 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0090
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA polymerase II transcriptional coactivator KIWI-like
Genome locationMC01:5468679..5469247
RNA-Seq ExpressionMC01g0090
SyntenyMC01g0090
Gene Ontology termsGO:0060261 - positive regulation of transcription initiation from RNA polymerase II promoter (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005667 - transcription factor complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR003173 - Transcriptional coactivator p15 (PC4), C-terminal
IPR009044 - ssDNA-binding transcriptional regulator
IPR045125 - RNA polymerase II transcriptional coactivator Sub1/Tcp4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033606.1 RNA polymerase II transcriptional coactivator KIWI [Cucurbita argyrosperma subsp. argyrosperma]6.65e-4393.51Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++H SEGDAPPKKT +KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

XP_022149410.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X1 [Momordica charantia]6.02e-4598.7Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

XP_022149411.1 RNA polymerase II transcriptional coactivator KIWI-like isoform X2 [Momordica charantia]3.71e-4598.7Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

XP_022925285.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita moschata]6.17e-4292.21Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++HASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

XP_023518433.1 RNA polymerase II transcriptional coactivator KIWI-like [Cucurbita pepo subsp. pepo]1.51e-4293.51Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++HASEGDAPPKKT KKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

TrEMBL top hitse value%identityAlignment
A0A6J1D5M3 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.92e-4598.7Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1D8A4 RNA polymerase II transcriptional coactivator KIWI-like isoform X21.79e-4598.7Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1EHI0 RNA polymerase II transcriptional coactivator KIWI-like2.99e-4292.21Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++HASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1EYI2 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.69e-4190.91Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++H  EGDAPPKKT +KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

A0A6J1HRT2 RNA polymerase II transcriptional coactivator KIWI-like isoform X12.99e-4292.21Show/hide
Query:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MSARGKRKDD++HASEGDAPPKKT KKDS+ETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGK+MPGKKG S
Subjt:  MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

SwissProt top hitse value%identityAlignment
O65154 RNA polymerase II transcriptional coactivator KIWI8.6e-2166.27Show/hide
Query:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MS+RGKRKD+D  AS+ +    AP KK +K   DSD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG S
Subjt:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

O65155 RNA polymerase II transcriptional coactivator KELP6.0e-0634.72Show/hide
Query:  KRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        + +D D+   +G+        K+ D+  ++++C +S  RRV ++ ++GK +V IRE+Y KDGK++P  KG S
Subjt:  KRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

Arabidopsis top hitse value%identityAlignment
AT5G09240.1 ssDNA-binding transcriptional regulator4.4e-1249.41Show/hide
Query:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS
        MS  GKRKD      DD   SE  APPKK + K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+G S
Subjt:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS

AT5G09240.2 ssDNA-binding transcriptional regulator4.4e-1249.41Show/hide
Query:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS
        MS  GKRKD      DD   SE  APPKK + K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P   K+G S
Subjt:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP--GKKGSS

AT5G09240.3 ssDNA-binding transcriptional regulator4.4e-1250.65Show/hide
Query:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP
        MS  GKRKD      DD   SE  APPKK + K +DE ++I +C + KNRRV VRN  G+I + IR+F+VKDG  +P
Subjt:  MSARGKRKD------DDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMP

AT5G09250.1 ssDNA-binding transcriptional regulator6.1e-2266.27Show/hide
Query:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS
        MS+RGKRKD+D  AS+ +    AP KK +K   DSD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG S
Subjt:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS

AT5G09250.2 ssDNA-binding transcriptional regulator8.0e-2265.85Show/hide
Query:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGS
        MS+RGKRKD+D  AS+ +    AP KK +K   DSD++D+IVVC ISKNRRV VRNW GKI +DIREFYVKDGK +PGKKG+
Subjt:  MSARGKRKDDDEHASEGD----APPKKTSK--KDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAAGAGGAAAGCGAAAGGATGACGATGAACACGCATCCGAAGGGGACGCTCCTCCCAAGAAGACATCGAAGAAAGACTCTGACGAAACCGACGAAATCGTCGT
CTGCGAGATTTCGAAAAATCGGAGGGTTATGGTGAGGAACTGGCAGGGAAAGATTGTGGTGGATATTCGGGAGTTTTATGTCAAAGATGGGAAGCAGATGCCTGGAAAAA
AAGGTTCATCT
mRNA sequenceShow/hide mRNA sequence
GTCAAAATCACTCCCAAACAGCGCAACAAAATAAAATATATTGACCGGTCAACTGCTCGCGTTAACTCAAATTTAAATCTAAAAAAAAGAGAAGAAACAATAAAGAAGAA
AAGAAAAAGGAAAACGAAAAGCCCTTTAGTCACATAAACTTCCTAGTACGCCATTTCCAATTTTGTATCGCGCTCAGTTACAGAGTGTTGAAGGAGCACAGTCCGTGAGA
AGAAGAAGAACAGCAACAAAGATTCAACGGGAAGAAATGTCTGCAAGAGGAAAGCGAAAGGATGACGATGAACACGCATCCGAAGGGGACGCTCCTCCCAAGAAGACATC
GAAGAAAGACTCTGACGAAACCGACGAAATCGTCGTCTGCGAGATTTCGAAAAATCGGAGGGTTATGGTGAGGAACTGGCAGGGAAAGATTGTGGTGGATATTCGGGAGT
TTTATGTCAAAGATGGGAAGCAGATGCCTGGAAAAAAAGGTTCATCT
Protein sequenceShow/hide protein sequence
MSARGKRKDDDEHASEGDAPPKKTSKKDSDETDEIVVCEISKNRRVMVRNWQGKIVVDIREFYVKDGKQMPGKKGSS