; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0095 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0095
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionzf-RVT domain-containing protein
Genome locationMC01:5687972..5688652
RNA-Seq ExpressionMC01g0095
SyntenyMC01g0095
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035739.1 hypothetical protein E6C27_scaffold403G00100 [Cucumis melo var. makuwa]4.50e-3835.84Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS
        L+D+EI E   LL  +S+  +  + D   W +E  G F   SL    K    + K L  ++  SG P+R+N+L+WI+++  V +++ILQ+KSP + + PS
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS

Query:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF
        I  LC +  ++L H+F +CP ++  W   F +F LVW +D   SA+          PK   ++W    KA++ E+W ERNQRIF D  R   E  + A  
Subjt:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF

Query:  KASQWCVISDMFSSYSPSMICMNWEA
         A+ WC +   F +YS   IC+NW A
Subjt:  KASQWCVISDMFSSYSPSMICMNWEA

RVX22527.1 hypothetical protein CK203_012735 [Vitis vinifera]2.82e-2935.09Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFS----LWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMA
        L D EI  L  L+S +SSV  S  +D   W L  SGLF V S      A  +VS  +LF     LWSS  P +V +L W++ YG VNT D L+ + P  A
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFS----LWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMA

Query:  LQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVN--LLWINGFKAIISELWFERNQRIFXDSCRPSLECFN
        L P    LC  NGES++H+F  CP     W+  F +  LVWV  R   +    T   +   +    LW      +I  +W ERN RIF D  R     ++
Subjt:  LQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVN--LLWINGFKAIISELWFERNQRIFXDSCRPSLECFN

Query:  IAKFKASQWCVISDMFSSYSPSMICMNW
        +  F +S W   ++ F     +++ +NW
Subjt:  IAKFKASQWCVISDMFSSYSPSMICMNW

TYK21876.1 hypothetical protein E5676_scaffold494G00090 [Cucumis melo var. makuwa]1.99e-4035.81Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS
        L+D+EI E   LL  +S+  +  + D   W +E  G F   SL    K    + K L  ++  SG P+R+N+L+WI+++  VN+++ILQ+KSP + + PS
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS

Query:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF
        I  LC +  ++L H+F +CP ++  W   F +F LVW +D   SA+          PK   ++W    KA++ E+W ERNQRIF D  R   E  + A  
Subjt:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF

Query:  KASQWCVISDMFSSYSPSMICMNWEAFIS
         A+ WC +   F +YS   IC+NW  F++
Subjt:  KASQWCVISDMFSSYSPSMICMNWEAFIS

XP_022153214.1 uncharacterized protein LOC111020765 [Momordica charantia]3.84e-4543.96Show/hide
Query:  ADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSD
        ++  + K    +LW +  P+RVN+  WIL  G +NTADI+Q+KSP  AL PS   LC ++GE  +H+FF C +A+ CWNL F  F + W +D ++ +   
Subjt:  ADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSD

Query:  STCCW---VAPKVNLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKFKASQWCVISDMFSSYSPSMICMNWEAFIS
                ++  V  LW+N  KA++SELWFERN R+F +  R   E F  AKFKAS WC + D F  +SPSMI  NW AFI+
Subjt:  STCCW---VAPKVNLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKFKASQWCVISDMFSSYSPSMICMNWEAFIS

XP_038903695.1 uncharacterized protein LOC120090219 [Benincasa hispida]4.34e-4237.5Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS
        LKD+E+    +LL  I S + S + D   W +  +  + V SL         + K +  ++W +  P+RVN+L+WI+L+G +N A++LQ+K P  +L P+
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS

Query:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVW--DRESANFSDSTCCWVAPKVNLLWINGFKAIISELWFERNQRIFXD---SCRPSLECFNI
        +   C  + E   H+FF CPY++ CWN     F L      D +S  F             LLW N  KA++++LWFERNQRIF +   SC+  LE    
Subjt:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVW--DRESANFSDSTCCWVAPKVNLLWINGFKAIISELWFERNQRIFXD---SCRPSLECFNI

Query:  AKFKASQWCVISDMFSSYSPSMICMNWEAFIS
        A+ +AS WC++SD F +YS S   +NWEAFIS
Subjt:  AKFKASQWCVISDMFSSYSPSMICMNWEAFIS

TrEMBL top hitse value%identityAlignment
A0A438D8E5 Putative ribonuclease H protein5.98e-2833.62Show/hide
Query:  LKDKEIMELSELLSCISSVTIS-ENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFS----LWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKM
        L D EI  L  L+S + SV +S  ++D   W L  SG F V S       D   S  L+F     LWSS  P +V  L W++ YG VNT D LQ + P  
Subjt:  LKDKEIMELSELLSCISSVTIS-ENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFS----LWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKM

Query:  ALQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVN--LLWINGFKAIISELWFERNQRIFXDSCRPSLECF
        AL P    LC  NGES++H+F  CP     W+  F +  ++WV  R   +    +   +   V    LW      +I  +W ERN RIF D  R     +
Subjt:  ALQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVN--LLWINGFKAIISELWFERNQRIFXDSCRPSLECF

Query:  NIAKFKASQWCVISDMFSSYSPSMICMNW
        ++ +F +S W   ++ F     S++ +NW
Subjt:  NIAKFKASQWCVISDMFSSYSPSMICMNW

A0A438KMW4 zf-RVT domain-containing protein1.37e-2935.09Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFS----LWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMA
        L D EI  L  L+S +SSV  S  +D   W L  SGLF V S      A  +VS  +LF     LWSS  P +V +L W++ YG VNT D L+ + P  A
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFS----LWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMA

Query:  LQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVN--LLWINGFKAIISELWFERNQRIFXDSCRPSLECFN
        L P    LC  NGES++H+F  CP     W+  F +  LVWV  R   +    T   +   +    LW      +I  +W ERN RIF D  R     ++
Subjt:  LQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVN--LLWINGFKAIISELWFERNQRIFXDSCRPSLECFN

Query:  IAKFKASQWCVISDMFSSYSPSMICMNW
        +  F +S W   ++ F     +++ +NW
Subjt:  IAKFKASQWCVISDMFSSYSPSMICMNW

A0A5A7T2Y0 zf-RVT domain-containing protein2.18e-3835.84Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS
        L+D+EI E   LL  +S+  +  + D   W +E  G F   SL    K    + K L  ++  SG P+R+N+L+WI+++  V +++ILQ+KSP + + PS
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS

Query:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF
        I  LC +  ++L H+F +CP ++  W   F +F LVW +D   SA+          PK   ++W    KA++ E+W ERNQRIF D  R   E  + A  
Subjt:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF

Query:  KASQWCVISDMFSSYSPSMICMNWEA
         A+ WC +   F +YS   IC+NW A
Subjt:  KASQWCVISDMFSSYSPSMICMNWEA

A0A5D3DE60 zf-RVT domain-containing protein9.65e-4135.81Show/hide
Query:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS
        L+D+EI E   LL  +S+  +  + D   W +E  G F   SL    K    + K L  ++  SG P+R+N+L+WI+++  VN+++ILQ+KSP + + PS
Subjt:  LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPS

Query:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF
        I  LC +  ++L H+F +CP ++  W   F +F LVW +D   SA+          PK   ++W    KA++ E+W ERNQRIF D  R   E  + A  
Subjt:  IYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRE-SANFSDSTCCWVAPKV-NLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKF

Query:  KASQWCVISDMFSSYSPSMICMNWEAFIS
         A+ WC +   F +YS   IC+NW  F++
Subjt:  KASQWCVISDMFSSYSPSMICMNWEAFIS

A0A6J1DIE2 uncharacterized protein LOC1110207651.86e-4543.96Show/hide
Query:  ADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSD
        ++  + K    +LW +  P+RVN+  WIL  G +NTADI+Q+KSP  AL PS   LC ++GE  +H+FF C +A+ CWNL F  F + W +D ++ +   
Subjt:  ADLRVSKALLFSLWSSGCPKRVNMLVWILLYG-VNTADILQRKSPKMALQPSIYFLCAENGESLNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSD

Query:  STCCW---VAPKVNLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKFKASQWCVISDMFSSYSPSMICMNWEAFIS
                ++  V  LW+N  KA++SELWFERN R+F +  R   E F  AKFKAS WC + D F  +SPSMI  NW AFI+
Subjt:  STCCW---VAPKVNLLWINGFKAIISELWFERNQRIFXDSCRPSLECFNIAKFKASQWCVISDMFSSYSPSMICMNWEAFIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGAAAGATAAGGAGATTATGGAGCTTTCGGAGCTTCTTTCTTGCATTTCTTCGGTTACTATTTCAGAAAATGCTGATGTTTGTTGTTGGGGATTGGAAAAGTCGGGCCT
CTTCTTTGTTTCTTCTCTATGCAAGCCTCAGAAAGCTGATTTGCGGGTTTCAAAAGCTCTTCTATTCTCACTTTGGAGTTCGGGTTGCCCAAAACGAGTTAATATGTTAG
TTTGGATTCTATTATATGGAGTCAATACAGCAGATATTTTGCAGAGAAAGTCTCCTAAGATGGCTTTACAACCATCCATTTACTTTTTATGTGCAGAAAATGGAGAAAGT
TTAAATCATGTCTTCTTTTTCTGCCCATATGCTGCTGTTTGTTGGAATCTTTTTTTCCAGATGTTCCAATTAGTATGGGTGTGGGATCGTGAGTCTGCTAATTTTTCAGA
TTCTACATGTTGTTGGGTTGCGCCTAAAGTTAATCTACTTTGGATTAATGGGTTTAAGGCTATCATCTCAGAATTATGGTTTGAGAGGAACCAAAGGATTTTTTAAGATT
CTTGTCGCCCGTCATTGGAATGCTTCAACATCGCCAAATTCAAAGCTTCTCAATGGTGTGTTATTTCCGATATGTTCTCTTCGTATTCCCCTAGTATGATTTGTATGAAT
TGGGAGGCCTTTATTTCT
mRNA sequenceShow/hide mRNA sequence
TTGAAAGATAAGGAGATTATGGAGCTTTCGGAGCTTCTTTCTTGCATTTCTTCGGTTACTATTTCAGAAAATGCTGATGTTTGTTGTTGGGGATTGGAAAAGTCGGGCCT
CTTCTTTGTTTCTTCTCTATGCAAGCCTCAGAAAGCTGATTTGCGGGTTTCAAAAGCTCTTCTATTCTCACTTTGGAGTTCGGGTTGCCCAAAACGAGTTAATATGTTAG
TTTGGATTCTATTATATGGAGTCAATACAGCAGATATTTTGCAGAGAAAGTCTCCTAAGATGGCTTTACAACCATCCATTTACTTTTTATGTGCAGAAAATGGAGAAAGT
TTAAATCATGTCTTCTTTTTCTGCCCATATGCTGCTGTTTGTTGGAATCTTTTTTTCCAGATGTTCCAATTAGTATGGGTGTGGGATCGTGAGTCTGCTAATTTTTCAGA
TTCTACATGTTGTTGGGTTGCGCCTAAAGTTAATCTACTTTGGATTAATGGGTTTAAGGCTATCATCTCAGAATTATGGTTTGAGAGGAACCAAAGGATTTTTTAAGATT
CTTGTCGCCCGTCATTGGAATGCTTCAACATCGCCAAATTCAAAGCTTCTCAATGGTGTGTTATTTCCGATATGTTCTCTTCGTATTCCCCTAGTATGATTTGTATGAAT
TGGGAGGCCTTTATTTCT
Protein sequenceShow/hide protein sequence
LKDKEIMELSELLSCISSVTISENADVCCWGLEKSGLFFVSSLCKPQKADLRVSKALLFSLWSSGCPKRVNMLVWILLYGVNTADILQRKSPKMALQPSIYFLCAENGES
LNHVFFFCPYAAVCWNLFFQMFQLVWVWDRESANFSDSTCCWVAPKVNLLWINGFKAIISELWFERNQRIFUDSCRPSLECFNIAKFKASQWCVISDMFSSYSPSMICMN
WEAFIS