; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0115 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0115
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description50S ribosomal protein L16, chloroplastic
Genome locationMC01:6113863..6114198
RNA-Seq ExpressionMC01g0115
SyntenyMC01g0115
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0019843 - rRNA binding (molecular function)
InterPro domainsIPR000114 - Ribosomal protein L16
IPR016180 - Ribosomal protein L10e/L16
IPR020798 - Ribosomal protein L16, conserved site
IPR036920 - Ribosomal protein L10e/L16 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
QDK99983.1 ribosomal protein L16 [Siraitia grosvenorii]2.38e-7195.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

YP_009456098.1 ribosomal protein L16 [Momordica charantia]1.91e-76100Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

YP_009674428.1 ribosomal protein L16 [Siraitia grosvenorii]1.46e-7195.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

YP_009752195.1 ribosomal protein L16 [Linnaeosicyos amara]1.73e-7195.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

YP_009752280.1 ribosomal protein L16 [Trichosanthes baviensis]2.46e-7195.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

TrEMBL top hitse value%identityAlignment
A0A2I6C017 50S ribosomal protein L16, chloroplastic9.26e-77100Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

A0A514YKW7 50S ribosomal protein L16, chloroplastic7.05e-7295.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

A0A515BLR4 50S ribosomal protein L16, chloroplastic1.15e-7195.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

A0A6C0UEP4 50S ribosomal protein L16, chloroplastic7.05e-7295.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

A0A6H0EUT5 50S ribosomal protein L16, chloroplastic8.39e-7295.54Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

SwissProt top hitse value%identityAlignment
A4GYU8 50S ribosomal protein L16, chloroplastic7.8e-5591.82Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYA+QALEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGR++YEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFI
        SKMPIRTQFI
Subjt:  SKMPIRTQFI

B1NWI7 50S ribosomal protein L16, chloroplastic4.1e-5693.75Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYA+QALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFI S
Subjt:  SKMPIRTQFITS

Q0ZIY1 50S ribosomal protein L16, chloroplastic2.7e-5591.96Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYA+QALEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFI S
Subjt:  SKMPIRTQFITS

Q49KW1 50S ribosomal protein L16, chloroplastic6.0e-5591.07Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFG+YA+QALEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSP YWVAVVKPGRILYEMGGVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFI S
Subjt:  SKMPIRTQFITS

Q4VZN1 50S ribosomal protein L16, chloroplastic1.2e-5593.75Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGN ICFGRYAIQALEP WITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRP ETRMGSGKGSP YWVAVVKPGRILYEM GVAENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPIRTQFITS
Subjt:  SKMPIRTQFITS

Arabidopsis top hitse value%identityAlignment
AT2G28830.1 PLANT U-BOX 121.9e-4071.3Show/hide
Query:  ICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGASKMP
        IC  RYA+Q LEP WITSRQIEAGRRAMTRN  RG  + V IF DKPVT+RPPETRMG GKG+P +WVAVVKPG+I+YEMGGV+E +AR+A+SI ASK+P
Subjt:  ICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGASKMP

Query:  IRTQFITS
         +T+FI S
Subjt:  IRTQFITS

ATCG00790.1 ribosomal protein L161.0e-5488.39Show/hide
Query:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA
        RGNRICFGRYA+Q LEP WITSRQIEAGRRAMTRN RRGGKIWVRIFPDKPVT+RP ETRMGSGKGSP YWVAVVKPG+ILYEMGGV ENIARKA+SI A
Subjt:  RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGA

Query:  SKMPIRTQFITS
        SKMPI+TQFI S
Subjt:  SKMPIRTQFITS

ATMG00080.1 ribosomal protein L163.4e-2143.59Show/hide
Query:  GNRICFGRYAIQALEPGWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIAR
        G ++ FGRY  ++ + G ++ R IEA R        RAM+   RR GKIWVR+F D P+T +P E RMG GKG+P  W+A V  G+I +EM GV+   AR
Subjt:  GNRICFGRYAIQALEPGWITSRQIEAGR--------RAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIAR

Query:  KAMSIGASKMPIRTQFI
        +A ++ A K    T+F+
Subjt:  KAMSIGASKMPIRTQFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGGTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACG
ACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCTCCAGAAACACGTATGGGTTCAGGCAAAGGATCCCCCGGATATTGGGTAGCTG
TTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAGGCTATGTCAATAGGGGCGTCTAAAATGCCTATACGAACCCAATTCATT
ACTTCG
mRNA sequenceShow/hide mRNA sequence
CGAGGCAATCGTATTTGCTTCGGTAGATACGCTATTCAGGCACTTGAACCCGGTTGGATCACATCTAGACAAATCGAAGCGGGACGAAGGGCAATGACACGAAATGCACG
ACGCGGCGGAAAAATATGGGTACGTATATTTCCAGACAAACCCGTTACACTAAGACCTCCAGAAACACGTATGGGTTCAGGCAAAGGATCCCCCGGATATTGGGTAGCTG
TTGTTAAACCAGGTAGAATACTTTATGAAATGGGTGGAGTAGCAGAAAATATAGCCAGAAAGGCTATGTCAATAGGGGCGTCTAAAATGCCTATACGAACCCAATTCATT
ACTTCG
Protein sequenceShow/hide protein sequence
RGNRICFGRYAIQALEPGWITSRQIEAGRRAMTRNARRGGKIWVRIFPDKPVTLRPPETRMGSGKGSPGYWVAVVKPGRILYEMGGVAENIARKAMSIGASKMPIRTQFI
TS