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MC01g0159 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0159
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box protein PP2-B15-like
Genome locationMC01:7369181..7369579
RNA-Seq ExpressionMC01g0159
SyntenyMC01g0159
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021074.1 F-box protein PP2-B15, partial [Cucurbita argyrosperma subsp. argyrosperma]1.00e-1950.94Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPT--FSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT
        L ++C+S ILSLTTP+D  +L+   +AF+ A  SD V GRFL  NY      S       F  +REIFF+  SP L+DGGKT FEL+KFSGK CY+LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPT--FSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT

Query:  ALSISW
         L I+W
Subjt:  ALSISW

XP_022156417.1 F-box protein VBF-like [Momordica charantia]6.52e-2258.1Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT
        L E+CVSEILSLTTPSDA RL+   AAF+SA  SD V GRFL  NY  +           F  +REIFF F SP LLDGGK +F+LEKFSGK  Y+LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT

Query:  ALSIS
         LSI+
Subjt:  ALSIS

XP_022156423.1 F-box protein VBF-like [Momordica charantia]1.89e-2054.72Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT
        L E+CVS ILSLTTPSD  RL+   +AF+SA  SD V GRFL  NY  +           F  +REIFF+  SP LLDGGK + ELEK S K CY LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT

Query:  ALSISW
         LSISW
Subjt:  ALSISW

XP_022937763.1 F-box protein PP2-B15-like [Cucurbita moschata]1.02e-1950.94Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPT--FSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT
        L ++C+S ILSLTTP+D  +L+   +AF+ A  SD V GRFL  NY      S       F  +REIFF+  SP L+DGGKT FEL+KFSGK CY+LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPT--FSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT

Query:  ALSISW
         L I+W
Subjt:  ALSISW

XP_023537654.1 F-box protein PP2-B15-like [Cucurbita pepo subsp. pepo]7.27e-1949.06Show/hide
Query:  LSENCVSEILSLTTPSDAXR---LAAAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT
        L ++C+S ILSLTTP+D  +   ++ AF+ A  SD V GRFL  NY  +           F  +REIFF+  SP L+DGGKT FEL+KFSGK CY+LS  
Subjt:  LSENCVSEILSLTTPSDAXR---LAAAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT

Query:  ALSISW
         L I+W
Subjt:  ALSISW

TrEMBL top hitse value%identityAlignment
A0A6J1DQK9 F-box protein VBF-like9.17e-2154.72Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT
        L E+CVS ILSLTTPSD  RL+   +AF+SA  SD V GRFL  NY  +           F  +REIFF+  SP LLDGGK + ELEK S K CY LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT

Query:  ALSISW
         LSISW
Subjt:  ALSISW

A0A6J1DS06 F-box protein VBF-like3.16e-2258.1Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT
        L E+CVSEILSLTTPSDA RL+   AAF+SA  SD V GRFL  NY  +           F  +REIFF F SP LLDGGK +F+LEKFSGK  Y+LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINY--VWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT

Query:  ALSIS
         LSI+
Subjt:  ALSIS

A0A6J1FGV3 F-box protein PP2-B15-like4.92e-2050.94Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPT--FSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT
        L ++C+S ILSLTTP+D  +L+   +AF+ A  SD V GRFL  NY      S       F  +REIFF+  SP L+DGGKT FEL+KFSGK CY+LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPT--FSLRREIFFQFGSPPLLDGGKT-FELEKFSGKFCYVLSTT

Query:  ALSISW
         L I+W
Subjt:  ALSISW

A0A6J1G464 F-box protein PP2-B15-like1.34e-1850.94Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSL--RREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT
        L E+C+S ILSLTTPSDA +L+   + F+SA  SD V  RFL  NY      S      SL  +RE FF+  S  L+DGGK +FELE+FSGK CY LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSL--RREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT

Query:  ALSISW
         L+I+W
Subjt:  ALSISW

A0A6J1KF36 F-box protein PP2-B15-like9.62e-1950Show/hide
Query:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSL--RREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT
        L E+C+S ILSLTTP+DA +L+   + F+SA  SD V  RFL  NY      S       L  +RE FF+  SP L+DGGK +FELE+FSGK CY LS  
Subjt:  LSENCVSEILSLTTPSDAXRLA---AAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSL--RREIFFQFGSPPLLDGGK-TFELEKFSGKFCYVLSTT

Query:  ALSISW
         L+I+W
Subjt:  ALSISW

SwissProt top hitse value%identityAlignment
Q3E6P4 F-box protein At2g022405.2e-1041.9Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA
        L E+C+S I+S T+P DA   A+    F+SA  SD V  +FL   Y    L S +R  F+ ++E++F     P+L  DG K+F LEK SGK C +LS+  
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA

Query:  LSISW
        L I+W
Subjt:  LSISW

Q570N1 F-box protein PP2-B32.3e-1040.95Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA
        L ENC+S I+S TTP DA   A+   AF+SA  SD V  +FL ++Y       P    F  ++E+ F     PLL   G K+F L+K SG+ C +LS   
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA

Query:  LSISW
        + ISW
Subjt:  LSISW

Q949S5 F-box protein PP2-B112.8e-1140Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAAA---FQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK--TFELEKFSGKFCYVLSTTA
        L E+C+++ILSLTTP D  RL+A    F+SA  SDDV   FL  ++   P           R+++FF     PLL  G   +F LE+ SG  CY+++  A
Subjt:  LSENCVSEILSLTTPSDAXRLAAA---FQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK--TFELEKFSGKFCYVLSTTA

Query:  LSISW
        L+I W
Subjt:  LSISW

Q9FV02 F-box protein SKIP33.6e-1143.27Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAAA---FQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA
        L E C+S I+S T+P DA   AA    F+SA  SD V  +FL  +Y    L +P+R  FS ++E++F   + PLL  DG  +  LEK SGK C +LS TA
Subjt:  LSENCVSEILSLTTPSDAXRLAAA---FQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA

Query:  LSIS
        +++S
Subjt:  LSIS

Q9ZVR5 Putative F-box protein PP2-B21.0e-1041.51Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLS-TT
        L E+C+S I+S T+P DA   A+    F+SA  SD V  +FL  +Y    L  P+R  FS ++E++F     P+L  DGGK+F LEK +GK C++LS   
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLS-TT

Query:  ALSISW
        ++ I+W
Subjt:  ALSISW

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B153.1e-1041.51Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKS--PTRPTFSLRREIFFQFGSPPLLDGG-KTFELEKFSGKFCYVLSTT
        L E CV+ ILS TTP+D    AA    F+ A  SD V  +FL  +Y     +S  P R  FS ++E++       L+D G K F++EK SGK  Y+LS+ 
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKS--PTRPTFSLRREIFFQFGSPPLLDGG-KTFELEKFSGKFCYVLSTT

Query:  ALSISW
         LSI+W
Subjt:  ALSISW

AT1G80110.1 phloem protein 2-B112.0e-1240Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAAA---FQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK--TFELEKFSGKFCYVLSTTA
        L E+C+++ILSLTTP D  RL+A    F+SA  SDDV   FL  ++   P           R+++FF     PLL  G   +F LE+ SG  CY+++  A
Subjt:  LSENCVSEILSLTTPSDAXRLAAA---FQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGK--TFELEKFSGKFCYVLSTTA

Query:  LSISW
        L+I W
Subjt:  LSISW

AT2G02230.1 phloem protein 2-B11.0e-0837.14Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA
        L E+C+S+++S T+P DA  +A+   + +SA  SD V   FL   Y    L+S    +   ++EIF       +L  +G K+F +EK SGK CY+LS   
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA

Query:  LSISW
        L+I W
Subjt:  LSISW

AT2G02240.1 F-box family protein3.7e-1141.9Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA
        L E+C+S I+S T+P DA   A+    F+SA  SD V  +FL   Y    L S +R  F+ ++E++F     P+L  DG K+F LEK SGK C +LS+  
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLSTTA

Query:  LSISW
        L I+W
Subjt:  LSISW

AT2G02250.1 phloem protein 2-B27.5e-1241.51Show/hide
Query:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLS-TT
        L E+C+S I+S T+P DA   A+    F+SA  SD V  +FL  +Y    L  P+R  FS ++E++F     P+L  DGGK+F LEK +GK C++LS   
Subjt:  LSENCVSEILSLTTPSDAXRLAA---AFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLL--DGGKTFELEKFSGKFCYVLS-TT

Query:  ALSISW
        ++ I+W
Subjt:  ALSISW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGTCGGAGAACTGCGTTTCGGAGATTCTGTCACTAACAACACCGTCGGACGCCTAAAGATTGGCCGCGGCGTTCCAGTCAGCGCCGGTATCCGACGACGTTTGTGGGAG
ATTCTTGTCCATAAACTACGTCTGGCCGCCTCTGAAATCTCCGACGAGACCCACATTTTCTTTGAGGAGAGAAATTTTCTTTCAATTCGGCTCTCCGCCCCTCCTTGACG
GTGGTAAAACCTTCGAGTTGGAAAAATTTTCTGGAAAGTTTTGTTACGTTTTGTCTACAACAGCACTGTCCATAAGTTGG
mRNA sequenceShow/hide mRNA sequence
TTGTCGGAGAACTGCGTTTCGGAGATTCTGTCACTAACAACACCGTCGGACGCCTAAAGATTGGCCGCGGCGTTCCAGTCAGCGCCGGTATCCGACGACGTTTGTGGGAG
ATTCTTGTCCATAAACTACGTCTGGCCGCCTCTGAAATCTCCGACGAGACCCACATTTTCTTTGAGGAGAGAAATTTTCTTTCAATTCGGCTCTCCGCCCCTCCTTGACG
GTGGTAAAACCTTCGAGTTGGAAAAATTTTCTGGAAAGTTTTGTTACGTTTTGTCTACAACAGCACTGTCCATAAGTTGG
Protein sequenceShow/hide protein sequence
LSENCVSEILSLTTPSDAURLAAAFQSAPVSDDVCGRFLSINYVWPPLKSPTRPTFSLRREIFFQFGSPPLLDGGKTFELEKFSGKFCYVLSTTALSISW