CuGenDBv2

Gene ID	MC01g0168
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Genome location	MC01:7714330..7714572
RNA-Seq Expression	MC01g0168
Synteny	MC01g0168
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0018298 - protein-chromophore linkage (biological process) GO:0009507 - chloroplast (cellular component) GO:0009522 - photosystem I (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016168 - chlorophyll binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domains	IPR001280 - Photosystem I PsaA/PsaB IPR036408 - Photosystem I PsaA/PsaB superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AFK36755.1 unknown [Lotus japonicus]

1.98e-45

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

AFS35547.1 photosystem I P700 apoprotein A2, partial [Fragaria pentaphylla]

1.98e-46

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

QBG49732.1 PSAB, partial [Transformation vector pCH8]

1.22e-45

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

WP_213032800.1 hypothetical protein, partial [Acinetobacter baumannii]

1.02e-45

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

XP_029147005.1 uncharacterized protein LOC114924948 [Arachis hypogaea]

6.34e-46

85.71

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG ISQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLSIWA +   GHFVWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

TrEMBL top hits

e value

%identity

Alignment

A0A1J3EG88 Photosystem I (Fragment)

4.71e-45

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

A0A5K1HU60 Photosystem I (Fragment)

1.22e-45

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

I3S913 Photosystem I

9.60e-46

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

J9Y2Z7 Photosystem I P700 apoprotein A2 (Fragment)

9.56e-47

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

Q5QA60 Photosystem I (Fragment)

1.22e-45

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

SwissProt top hits

e value

%identity

Alignment

A1EA07 Photosystem I P700 chlorophyll a apoprotein A2

6.9e-37

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

A4GG98 Photosystem I P700 chlorophyll a apoprotein A2

5.3e-37

83.33

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG ISQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

A4QJB4 Photosystem I P700 chlorophyll a apoprotein A2

6.9e-37

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

A4QJJ8 Photosystem I P700 chlorophyll a apoprotein A2

6.9e-37

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

Q3V535 Photosystem I P700 chlorophyll a apoprotein A2

6.9e-37

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

Arabidopsis top hits

e value

%identity

Alignment

ATCG00340.1 Photosystem I, PsaA/PsaB protein

4.9e-38

82.14

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL
        FWMLN +GWVTFYWHWKHITL QG +SQF+ESSTYLMGWLRDYLWLNSSQLIN  NPFGMNSLS+WA +   GH VWATGFMFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXI---GHFVWATGFMFL

ATCG00350.1 Photosystem I, PsaA/PsaB protein

1.4e-08

35.87

Show/hide

Query:  FWMLNILGWVTFYWHWKHITLXQGKIS-----------QFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXIGHFVWATGFMFL
        FWM N +  V F++ WK  +   G IS            F +SS  + GWLRD+LW  +SQ+I +S    +++  ++    HFVWA   MFL
Subjt:  FWMLNILGWVTFYWHWKHITLXQGKIS-----------QFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAXIGHFVWATGFMFL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

TTTTGGATGTTAAATATCCTTGGATGGGTTACTTTTTATTGGCATTGGAAGCACATCACATTATAGCAGGGTAAAATTTCACAGTTTGATGAATCTTCCACTTATTTGAT
GGGATGGTTAAGAGATTATCTATGGTTAAACTCTTCACAACTTATCAATGAATCTAATCCTTTTGGTATGAATAGTTTATCAATCTGGGCATGAATTGGACATTTTGTTT
GGGCTACTGGATTTATGTTCTTA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

FWMLNILGWVTFYWHWKHITLUQGKISQFDESSTYLMGWLRDYLWLNSSQLINESNPFGMNSLSIWAUIGHFVWATGFMFL

MC01g0168 (gene) of Bitter gourd (Dali-11) v1 genome