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MC01g0319 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0319
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionVID27-like protein
Genome locationMC01:9902592..9903101
RNA-Seq ExpressionMC01g0319
SyntenyMC01g0319
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060117.1 B3 domain-containing protein [Cucumis melo var. makuwa]1.42e-1537.14Show/hide
Query:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT
        N P E+ K ++       + P ++MEK+L++ DV+E RNRL IP +K +  FL ++EE++++      VE+IEPD  TVS +TL +    +    +YVL 
Subjt:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT

Query:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI
         +W+ +V RN   LK G  +++W F  G G    RLCF +
Subjt:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI

TYK08431.1 B3 domain-containing protein [Cucumis melo var. makuwa]1.12e-1437.14Show/hide
Query:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT
        N P E+ K ++       + P ++MEK+L++ DV+E RNRL IP +K +  FL ++EE++++      VE+IEPD  TVS +TL +    +    +YVL 
Subjt:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT

Query:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI
         +W+ +V RN   LK G  +++W F  G G    RLCF +
Subjt:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI

XP_022156187.1 VID27-like protein [Momordica charantia]1.08e-116100Show/hide
Query:  NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVL
        NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVL
Subjt:  NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVL

Query:  TGQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP
        TGQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP
Subjt:  TGQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP

XP_022156209.1 B3 domain-containing protein At1g05920-like [Momordica charantia]3.63e-1541.79Show/hide
Query:  PRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALKRGRRV
        P  +M KKL ++DVDE  NRL IP +K++E F+ L+EE++++  + M VE+IEPDS +VS +TL +    +   P+YV+  +W  +V RN   LK G  V
Subjt:  PRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALKRGRRV

Query:  RVWYFHDGDGDVGL-----RLCFAIEVFESGKGG
         +W F  G G  G      RLCF + V E  +GG
Subjt:  RVWYFHDGDGDVGL-----RLCFAIEVFESGKGG

XP_023544949.1 B3 domain-containing protein At2g31420-like [Cucurbita pepo subsp. pepo]8.59e-1541.67Show/hide
Query:  PRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALKRGRRV
        P  L++K+L++ DVDE RNRL IP +K++  FL L+EE++++      VEVIEPD  +VS +TL +         +YV   +W+ +V RN   LK G  V
Subjt:  PRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALKRGRRV

Query:  RVWYFH-----DGDGDVGLRLCFAI-EVFESG
        ++W F       GDGD G RLCF + E+ E G
Subjt:  RVWYFH-----DGDGDVGLRLCFAI-EVFESG

TrEMBL top hitse value%identityAlignment
A0A5A7SSE3 B3 domain-containing protein5.40e-1537.14Show/hide
Query:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT
        N P E+ K ++       + P ++MEK+L++ DV+E RNRL IP +K +  FL ++EE++++      VE+IEPD  TVS +TL +    +    +YVL 
Subjt:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT

Query:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI
         +W+ +V RN   LK G  +++W F  G G    RLCF +
Subjt:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI

A0A5A7UZP8 B3 domain-containing protein6.87e-1637.14Show/hide
Query:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT
        N P E+ K ++       + P ++MEK+L++ DV+E RNRL IP +K +  FL ++EE++++      VE+IEPD  TVS +TL +    +    +YVL 
Subjt:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT

Query:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI
         +W+ +V RN   LK G  +++W F  G G    RLCF +
Subjt:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI

A0A5D3C998 B3 domain-containing protein5.40e-1537.14Show/hide
Query:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT
        N P E+ K ++       + P ++MEK+L++ DV+E RNRL IP +K +  FL ++EE++++      VE+IEPD  TVS +TL +    +    +YVL 
Subjt:  NFPLEFTKRLV---DPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLT

Query:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI
         +W+ +V RN   LK G  +++W F  G G    RLCF +
Subjt:  GQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAI

A0A6J1DRC9 VID27-like protein5.24e-117100Show/hide
Query:  NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVL
        NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVL
Subjt:  NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVL

Query:  TGQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP
        TGQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP
Subjt:  TGQWSQVVARNSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP

A0A6J1DSR8 B3 domain-containing protein At1g05920-like1.76e-1541.79Show/hide
Query:  PRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALKRGRRV
        P  +M KKL ++DVDE  NRL IP +K++E F+ L+EE++++  + M VE+IEPDS +VS +TL +    +   P+YV+  +W  +V RN   LK G  V
Subjt:  PRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVARNSDALKRGRRV

Query:  RVWYFHDGDGDVGL-----RLCFAIEVFESGKGG
         +W F  G G  G      RLCF + V E  +GG
Subjt:  RVWYFHDGDGDVGL-----RLCFAIEVFESGKGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATTTTCCTCCGAACTTCCCCCTGGAATTCACGAAGCGACTCGTAGATCCGCTATCGATCCGTCCTCGAATCTTGATGGAGAAGAAACTGCGCGAATCCGACGTCGACGA
GAATCGCAACCGGTTGTCGATTCCGGCGAAGAAGGTGAAGGAGGCGTTCTTGCTGCTGGATGAGGAGGATCGGATGAGCGCCGGCGAGGACATGGAGGTGGAGGTGATCG
AGCCGGACAGCGGAACGGTCAGCGCCGTGACTCTGCGGAGGCGGCGGATCGGAGAGAATCAGCCGCCGTCGTACGTGCTGACCGGGCAGTGGAGCCAGGTGGTGGCGCGT
AACAGTGACGCGCTAAAGAGGGGAAGAAGAGTTAGGGTTTGGTATTTTCACGACGGCGACGGCGACGTCGGCTTACGGCTCTGTTTTGCGATTGAAGTTTTTGAATCAGG
GAAAGGGGGAGATGGTGAATTTGTGAAGGAACTGACTCAGAAATGGTGGGGACAAAATATTTTTACTCCA
mRNA sequenceShow/hide mRNA sequence
AATTTTCCTCCGAACTTCCCCCTGGAATTCACGAAGCGACTCGTAGATCCGCTATCGATCCGTCCTCGAATCTTGATGGAGAAGAAACTGCGCGAATCCGACGTCGACGA
GAATCGCAACCGGTTGTCGATTCCGGCGAAGAAGGTGAAGGAGGCGTTCTTGCTGCTGGATGAGGAGGATCGGATGAGCGCCGGCGAGGACATGGAGGTGGAGGTGATCG
AGCCGGACAGCGGAACGGTCAGCGCCGTGACTCTGCGGAGGCGGCGGATCGGAGAGAATCAGCCGCCGTCGTACGTGCTGACCGGGCAGTGGAGCCAGGTGGTGGCGCGT
AACAGTGACGCGCTAAAGAGGGGAAGAAGAGTTAGGGTTTGGTATTTTCACGACGGCGACGGCGACGTCGGCTTACGGCTCTGTTTTGCGATTGAAGTTTTTGAATCAGG
GAAAGGGGGAGATGGTGAATTTGTGAAGGAACTGACTCAGAAATGGTGGGGACAAAATATTTTTACTCCA
Protein sequenceShow/hide protein sequence
NFPPNFPLEFTKRLVDPLSIRPRILMEKKLRESDVDENRNRLSIPAKKVKEAFLLLDEEDRMSAGEDMEVEVIEPDSGTVSAVTLRRRRIGENQPPSYVLTGQWSQVVAR
NSDALKRGRRVRVWYFHDGDGDVGLRLCFAIEVFESGKGGDGEFVKELTQKWWGQNIFTP