; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0370 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0370
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationMC01:10424657..10426782
RNA-Seq ExpressionMC01g0370
SyntenyMC01g0370
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147887.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus]6.32e-19394.7Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRL ++ PSSGRVQARF FGKKK+ PKKS  SK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+++VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS

XP_008449241.1 PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo]6.32e-19394.7Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++ PSSGRVQARF FGKKK+ PKKS  SK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+++VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS

XP_022151483.1 chlorophyll a-b binding protein CP29.1, chloroplastic [Momordica charantia]2.41e-207100Show/hide
Query:  MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
Subjt:  NVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS
        FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS
Subjt:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS

XP_022966541.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima]7.05e-19394.39Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRL DVR SSGRVQARFSFGKKK+  KKS  SKQI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GD+IGTRFENS+VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSSSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS

XP_038882769.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]6.32e-19394.7Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++RP SGRVQARF FGKKK+ PKKS  SK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+++VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKK VLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS

TrEMBL top hitse value%identityAlignment
A0A0A0KXI3 Chlorophyll a-b binding protein, chloroplastic3.06e-19394.7Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSF+GTRL ++ PSSGRVQARF FGKKK+ PKKS  SK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+++VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS

A0A1S3BMH8 Chlorophyll a-b binding protein, chloroplastic3.06e-19394.7Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++ PSSGRVQARF FGKKK+ PKKS  SK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+++VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS

A0A5D3BBB3 Chlorophyll a-b binding protein, chloroplastic3.06e-19394.7Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        ATAAATSSFIGTRL ++ PSSGRVQARF FGKKK+ PKKS  SK ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GDIIGTRFE+++VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS
        NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSS

A0A6J1DCA5 Chlorophyll a-b binding protein, chloroplastic1.17e-207100Show/hide
Query:  MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
        MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK
Subjt:  MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAK

Query:  NVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
        NVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE
Subjt:  NVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIE

Query:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS
        FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS
Subjt:  FQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS

A0A6J1HPL7 Chlorophyll a-b binding protein, chloroplastic3.42e-19394.39Show/hide
Query:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
        AT+AATSSFIGTRL DVR SSGRVQARFSFGKKK+  KKS  SKQI DRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA
Subjt:  ATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKS--SKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVA

Query:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR
        GD+IGTRFENS+VKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPFS+T LIWIEVLVIGYIEFQR
Subjt:  GDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQR

Query:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS
        NAEL+PEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSSSS
Subjt:  NAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS

SwissProt top hitse value%identityAlignment
Q01667 Chlorophyll a-b binding protein 6, chloroplastic1.5e-3841.63Show/hide
Query:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS
        W PG   P +LDGS  GD+GFDP GLG+ PA                                             L+R++E ELIH RWAMLA  G L 
Subjt:  WFPGAKAPEWLDGSLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALS

Query:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF
         E L    W  A +   + G  ++YLG P+P+ ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ RLA++AF
Subjt:  VEWLTGVTWQDAGKVELVEG--SSYLGQPLPF-SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAF

Query:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID
        +GF V Q+A  G GPL N ATHL+DP H  I D
Subjt:  LGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID

Q07473 Chlorophyll a-b binding protein CP29.1, chloroplastic4.1e-14084.48Show/hide
Query:  MAAATATAAATSSFIGTRL-PDVRPSSGRVQARFSFGKKKTAPKKSSKQ--ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        MAA +A AAA SS +GTR+ P + P SGR  A F FGKKK APKKS+K+   +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQN
Subjt:  MAAATATAAATSSFIGTRL-PDVRPSSGRVQARFSFGKKKTAPKKSSKQ--ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKN+AGD+IGTR E +D KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIG
Subjt:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS
        YIEFQRNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+FSSS
Subjt:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS

Q93WD2 Chlorophyll a-b binding protein CP299.6e-6551.7Show/hide
Query:  PSSGRVQARFSFGKKKTAPKKSSKQISDR----------------PLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDII
        P+    Q +      K APK ++K+++                   LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G + 
Subjt:  PSSGRVQARFSFGKKKTAPKKSSKQISDR----------------PLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDII

Query:  GTRFENSDVKSTP--FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNA
               D  S+     PY+EVFGL RFRECELIHGRWAMLA LGAL  E  TGV+W +AGKVEL +G+SY G  LPFSIT LIWIEV+++G  EF RN+
Subjt:  GTRFENSDVKSTP--FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNA

Query:  ELDPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA
        E +PEKR YPGG  FDPL LA + E++A  L+ AEIKHARLAMV+F G+ VQA  TG+G L + A
Subjt:  ELDPEKRLYPGGKFFDPLGLAEDPEKKAV-LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA

Q9S7W1 Chlorophyll a-b binding protein CP29.3, chloroplastic1.0e-11476.19Show/hide
Query:  ATATAAATSSFIGTRLPDVRPSSGRVQAR--FSFGKKKTA-PKKSSKQI---SDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK A P K S+Q+    DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQN
Subjt:  ATATAAATSSFIGTRLPDVRPSSGRVQAR--FSFGKKKTA-PKKSSKQI---SDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKNVAGDIIG   E+S++K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+G
Subjt:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        YIEFQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

Q9XF88 Chlorophyll a-b binding protein CP29.2, chloroplastic1.1e-13784.27Show/hide
Query:  AATATAAATSSFIGTR-LPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        AAT+TAAA SS +GTR + D+  +S R  ARF FG KK +PKK+   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN
Subjt:  AATATAAATSSFIGTR-LPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        + G++IGTR E  D KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS
        QRNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+FSSS
Subjt:  QRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS

Arabidopsis top hitse value%identityAlignment
AT2G40100.1 light harvesting complex photosystem II7.2e-11676.19Show/hide
Query:  ATATAAATSSFIGTRLPDVRPSSGRVQAR--FSFGKKKTA-PKKSSKQI---SDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK A P K S+Q+    DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQN
Subjt:  ATATAAATSSFIGTRLPDVRPSSGRVQAR--FSFGKKKTA-PKKSSKQI---SDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKNVAGDIIG   E+S++K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYLGQPLPFS+TTLIWIEVLV+G
Subjt:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT
        YIEFQRN+ELDPEKR+YPGG +FDPLGLA DPEK   L+LAEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Subjt:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT

AT2G40100.2 light harvesting complex photosystem II1.2e-6773.26Show/hide
Query:  ATATAAATSSFIGTRLPDVRPSSGRVQAR--FSFGKKKTA-PKKSSKQI---SDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK A P K S+Q+    DR +WFPGA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQN
Subjt:  ATATAAATSSFIGTRLPDVRPSSGRVQAR--FSFGKKKTA-PKKSSKQI---SDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE
        LAKNVAGDIIG   E+S++K TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Subjt:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE

AT3G08940.1 light harvesting complex photosystem II1.5e-7374.73Show/hide
Query:  AATATAAATSSFIGTR-LPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        AAT+TAAA SS +GTR + D+  +S R  ARF FG KK +PKK+   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN
Subjt:  AATATAAATSSFIGTR-LPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
        + G++IGTR E  D KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L   L F
Subjt:  VAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF

AT3G08940.2 light harvesting complex photosystem II7.9e-13984.27Show/hide
Query:  AATATAAATSSFIGTR-LPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN
        AAT+TAAA SS +GTR + D+  +S R  ARF FG KK +PKK+   ISDRPLWFPGAK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN
Subjt:  AATATAAATSSFIGTR-LPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKN

Query:  VAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF
        + G++IGTR E  D KSTPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIGYIEF
Subjt:  VAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEF

Query:  QRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS
        QRNAELD EKRLYPGGKFFDPLGLA DP KKA LQLAEIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+FSSS
Subjt:  QRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS

AT5G01530.1 light harvesting complex photosystem II2.9e-14184.48Show/hide
Query:  MAAATATAAATSSFIGTRL-PDVRPSSGRVQARFSFGKKKTAPKKSSKQ--ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN
        MAA +A AAA SS +GTR+ P + P SGR  A F FGKKK APKKS+K+   +DRPLW+PGA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQN
Subjt:  MAAATATAAATSSFIGTRL-PDVRPSSGRVQARFSFGKKKTAPKKSSKQ--ISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQN

Query:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG
        LAKN+AGD+IGTR E +D KSTPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYLGQPLPFSI+TLIWIEVLVIG
Subjt:  LAKNVAGDIIGTRFENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIG

Query:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS
        YIEFQRNAELD EKRLYPGGKFFDPLGLA DPEK A LQLAEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIID+FSSS
Subjt:  YIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACGCGCCTCCCCGACGTGCGGCCGAGCTCTGGCCGAGTCCAAGCCCGATTCTCGTTCGGGAA
AAAGAAAACCGCGCCAAAGAAATCGTCGAAGCAGATTTCCGATCGGCCGCTGTGGTTCCCCGGCGCCAAGGCGCCGGAGTGGCTGGACGGAAGCTTAGTCGGCGACTACG
GCTTCGATCCGTTCGGATTGGGAAAACCGGCGGAGTATCTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGCGA
TTCGAGAACTCTGATGTGAAATCGACGCCGTTTCAGCCGTACACGGAAGTTTTCGGATTGCAGAGGTTCCGTGAGTGCGAACTGATCCATGGAAGGTGGGCCATGCTGGC
CACGCTCGGCGCTCTCTCTGTTGAGTGGCTCACTGGCGTCACCTGGCAAGACGCCGGAAAGGTGGAATTGGTGGAAGGTTCGTCGTACTTGGGGCAGCCACTTCCATTCT
CGATCACGACGCTGATCTGGATCGAAGTTCTAGTGATCGGGTACATCGAGTTCCAGAGGAACGCGGAGCTTGACCCGGAGAAGAGGCTGTACCCGGGAGGCAAGTTTTTC
GACCCGCTGGGGCTGGCGGAGGACCCGGAGAAGAAGGCCGTCCTCCAACTGGCGGAGATCAAGCACGCCCGCCTCGCCATGGTCGCATTCCTCGGCTTCGCCGTCCAAGC
CGCCGTTACCGGCAAAGGCCCGCTCAACAACTGGGCGACCCATCTCAGCGACCCGCTCCACACCACCATTATCGATTCCTTTTCTTCTTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
CTCAAAAGTAGAAGTTTGATTCCTATATCCAAGTTGTTGAAGGAAAAAAAAAGGTTACTTTTATAGTTTTATAGTGTATATATATTTATATTTAACGAAACAAAGCTTTA
TTTAATTCCTATGGTAAAATATCAAAGATTTTCGGCCGATGAGAAACCTCAACCACAAACTTCACAAACAAAATCGAGTGAAACGTCGACGCTTCGACCCCACCGTTCCT
GTACTATGGGATAAGGCAGAGATAAGGCCTGGAGGCACACAAGCCGTCAGATGGATTCGTCTCATAATCCAACGGACGTAAACTCAACACAACAGATTATGTGGCAATCG
CCGATCACAACTCCCCCTTCTAGACCACATAATAACCCAACCAAATCCCCAGTTCACCTCACACTCTCATTTCCCCTTTCAACTCATCTCCGTCGTAATGGCCGCCGCCA
CCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACGCGCCTCCCCGACGTGCGGCCGAGCTCTGGCCGAGTCCAAGCCCGATTCTCGTTCGGGAAAAAGAAAACCGCG
CCAAAGAAATCGTCGAAGCAGATTTCCGATCGGCCGCTGTGGTTCCCCGGCGCCAAGGCGCCGGAGTGGCTGGACGGAAGCTTAGTCGGCGACTACGGCTTCGATCCGTT
CGGATTGGGAAAACCGGCGGAGTATCTGCAGTACGATTTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGCGATTCGAGAACTCTG
ATGTGAAATCGACGCCGTTTCAGCCGTACACGGAAGTTTTCGGATTGCAGAGGTTCCGTGAGTGCGAACTGATCCATGGAAGGTGGGCCATGCTGGCCACGCTCGGCGCT
CTCTCTGTTGAGTGGCTCACTGGCGTCACCTGGCAAGACGCCGGAAAGGTGGAATTGGTGGAAGGTTCGTCGTACTTGGGGCAGCCACTTCCATTCTCGATCACGACGCT
GATCTGGATCGAAGTTCTAGTGATCGGGTACATCGAGTTCCAGAGGAACGCGGAGCTTGACCCGGAGAAGAGGCTGTACCCGGGAGGCAAGTTTTTCGACCCGCTGGGGC
TGGCGGAGGACCCGGAGAAGAAGGCCGTCCTCCAACTGGCGGAGATCAAGCACGCCCGCCTCGCCATGGTCGCATTCCTCGGCTTCGCCGTCCAAGCCGCCGTTACCGGC
AAAGGCCCGCTCAACAACTGGGCGACCCATCTCAGCGACCCGCTCCACACCACCATTATCGATTCCTTTTCTTCTTCTTCTTAAGCTCCTCCTCCTTCCTATGATCTCAT
CTTCTGTTTGTAAAAACTTTACCCA
Protein sequenceShow/hide protein sequence
MAAATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKKSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTR
FENSDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFF
DPLGLAEDPEKKAVLQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSSS