; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0416 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0416
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionfasciclin-like arabinogalactan protein 11
Genome locationMC01:10852726..10852953
RNA-Seq ExpressionMC01g0416
SyntenyMC01g0416
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR036378 - FAS1 domain superfamily
IPR045003 - Fasciclin-like arabinogalactan protein, group A


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604433.1 Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia]1.87e-3286.49Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

KAG7034576.1 Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma]1.87e-3286.49Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

XP_022151508.1 fasciclin-like arabinogalactan protein 11 [Momordica charantia]3.40e-4298.68Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS
        V+LVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS

XP_022925941.1 fasciclin-like arabinogalactan protein 11 [Cucurbita moschata]1.87e-3286.49Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

XP_023543377.1 fasciclin-like arabinogalactan protein 11 [Cucurbita pepo subsp. pepo]1.87e-3286.49Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

TrEMBL top hitse value%identityAlignment
A0A0A0KH46 FAS1 domain-containing protein6.30e-3182.43Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQ+HV+P F+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

A0A1S4DYE6 fasciclin-like arabinogalactan protein 117.06e-3081.08Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQ+HV+P F+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT V DAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

A0A6J1DCD1 fasciclin-like arabinogalactan protein 111.65e-4298.68Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS
        V+LVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS

A0A6J1EDI6 fasciclin-like arabinogalactan protein 119.05e-3386.49Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

A0A6J1IVC0 fasciclin-like arabinogalactan protein 111.91e-3286.49Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVANT YTDGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

SwissProt top hitse value%identityAlignment
Q8LEE9 Fasciclin-like arabinogalactan protein 122.6e-1759.46Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        VEL+QFHV+P++VS S F ++SNPLRTQAG+S    FPLNVTTSG+ VN T+ V +  V+   Y+DGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

Q8LEJ6 Fasciclin-like arabinogalactan protein 111.0e-1863.51Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLP  ++M QF +VSNPLRTQAG+    +FPLN+T+SG+QVN TT VV A VAN+ Y+D QL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

Q9FFH6 Fasciclin-like arabinogalactan protein 135.0e-0540Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+L+ +HV P F ++    SVSNP+RTQA G      + LN T  G+QVN +T VV+  ++ +   +  L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

Q9SIL7 Fasciclin-like arabinogalactan protein 64.2e-0435.9Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS
        ++L+ +H++P + S+S     SNP+RTQA   +   F LN T     +QVN +T VV+  + N       L VY V S
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS

Q9ZWA8 Fasciclin-like arabinogalactan protein 92.9e-0537.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+L+ +HV P + SM    SVSNP+RTQA   +   + LN T   +Q+N +T  V+  ++N+      L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

Arabidopsis top hitse value%identityAlignment
AT1G03870.1 FASCICLIN-like arabinoogalactan 92.1e-0637.84Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+L+ +HV P + SM    SVSNP+RTQA   +   + LN T   +Q+N +T  V+  ++N+      L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

AT2G20520.1 FASCICLIN-like arabinogalactan 63.0e-0535.9Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS
        ++L+ +H++P + S+S     SNP+RTQA   +   F LN T     +QVN +T VV+  + N       L VY V S
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS

AT5G03170.1 FASCICLIN-like arabinogalactan-protein 117.4e-2063.51Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+LVQFHVLP  ++M QF +VSNPLRTQAG+    +FPLN+T+SG+QVN TT VV A VAN+ Y+D QL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

AT5G44130.1 FASCICLIN-like arabinogalactan protein 13 precursor3.6e-0640Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        V+L+ +HV P F ++    SVSNP+RTQA G      + LN T  G+QVN +T VV+  ++ +   +  L VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV

AT5G60490.1 FASCICLIN-like arabinogalactan-protein 121.8e-1859.46Show/hide
Query:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV
        VEL+QFHV+P++VS S F ++SNPLRTQAG+S    FPLNVTTSG+ VN T+ V +  V+   Y+DGQL VY V
Subjt:  VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTT
TCCCCTGAATGTCACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCAATTACACCGACGGCCAACTTGTCGTTTACCACG
TCACCAGC
mRNA sequenceShow/hide mRNA sequence
GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTT
TCCCCTGAATGTCACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCAATTACACCGACGGCCAACTTGTCGTTTACCACG
TCACCAGC
Protein sequenceShow/hide protein sequence
VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTNYTDGQLVVYHVTS