; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0439 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0439
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionprotein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Genome locationMC01:11009566..11010830
RNA-Seq ExpressionMC01g0439
SyntenyMC01g0439
Gene Ontology termsGO:0009639 - response to red or far red light (biological process)
InterPro domainsIPR037766 - Protein FAR-RED ELONGATED HYPOCOTYL 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603645.1 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia]6.37e-5256.22Show/hide
Query:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESG
        HHPSH  T SF GFQPW+T  FDVKKKRKLL E  QLS PTPKLP WGP+ S +SFPYG  +FKFN+   K  EE E +LTK A E K++S  E  ++  
Subjt:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESG

Query:  -------LHISYGHGEDLLEFGSTD-----EECYRDS----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
               L ++YGH EDLLEFGS       E+C  DS          KHDFVLSSGRW++DP +ESK + PTIDQEFEQYFS +L
Subjt:  -------LHISYGHGEDLLEFGSTD-----EECYRDS----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

KAG7033829.1 hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma]8.51e-5255.68Show/hide
Query:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESG
        HHPSH  T SF GFQPW+T  FDVKKKRKLL E  QLS PTPKLP WGP+ S +SFPYG  + KFN+   K  EE E +LTK A E K++S  E  ++  
Subjt:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESG

Query:  -------LHISYGHGEDLLEFGSTD-----EECYRDS----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
               L ++YGH EDLLEFGS       E+C  DS          KHDFVLSSGRW++DP +ESK + PTIDQEFEQYFS +L
Subjt:  -------LHISYGHGEDLLEFGSTD-----EECYRDS----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

XP_022143715.1 uncharacterized protein LOC111013556 [Momordica charantia]1.05e-11698.8Show/hide
Query:  EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME
        EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME
Subjt:  EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME

Query:  SGLHISYGHGEDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSE--SKTLKPTIDQEFEQYFSVLL
        SGLHISYGHGEDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSE  SKTLKPTIDQEFEQYFSVLL
Subjt:  SGLHISYGHGEDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSE--SKTLKPTIDQEFEQYFSVLL

XP_023544624.1 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo]4.38e-5456.76Show/hide
Query:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMES-
        HHPSH  T SFPGFQPW+T  FDVKKKRKLL E  QLS PTPKLP WGP+ S +SFPYG  +FKFN+   K  EE E +LTK A E K++S  E  ++  
Subjt:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMES-

Query:  ------GLHISYGHGEDLLEFG-----STDEECYRDS----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
               L ++YGH EDLLEFG     S  E+C  DS          KHDFVLSSGRW++DP +ESK + PTIDQEFEQYFS +L
Subjt:  ------GLHISYGHGEDLLEFG-----STDEECYRDS----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

XP_038883311.1 protein FAR-RED ELONGATED HYPOCOTYL 1-like [Benincasa hispida]7.16e-5356.38Show/hide
Query:  EQESHHPSHSSTDS---FPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGG-NFKFNQNPQKDVEEEEINLTKRAMEVKEISKLE
        + + HHPSH  TDS   F  FQPWNT G DVKKKR+LLI+  QLS PT KLP WGP+ S+S P+G  NFKF++  Q++ E EE   T+ A+E KE SK +
Subjt:  EQESHHPSHSSTDS---FPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGG-NFKFNQNPQKDVEEEEINLTKRAMEVKEISKLE

Query:  ALMESG---LHISYGHGEDLLEFGSTD-----EECYRDS-----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
          M+     L  SYGH EDLLEFGS       E+C  DS           KHDFVLSSGRW+VDP +ESKT+KPTIDQEFEQYFSV L
Subjt:  ALMESG---LHISYGHGEDLLEFGSTD-----EECYRDS-----------KHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

TrEMBL top hitse value%identityAlignment
A0A0A0KZL8 Uncharacterized protein2.08e-4449.76Show/hide
Query:  HHPSHSSTDSF---------------PGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYG-GNFKFNQNPQKDVEEE----------
        HHPSH  TD                  G Q WNT   DVK KR+LLI+  QLS PT KLPRWGP  S+S P+G  NFKFN  PQ++ +EE          
Subjt:  HHPSHSSTDSF---------------PGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYG-GNFKFNQNPQKDVEEE----------

Query:  -EINLTKRAMEV-KEISKLEALMESG---LHISYGHGEDLLEFGSTD-----EECYR----------DSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFE
         E  LTK A++  KE+S+ +  M+ G   L  SYGH EDLLEFGS +     EEC            DSK +FVLSSGRW+VD  +ESK +KPTIDQEFE
Subjt:  -EINLTKRAMEV-KEISKLEALMESG---LHISYGHGEDLLEFGSTD-----EECYR----------DSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFE

Query:  QYFSVLL
        QYFSVLL
Subjt:  QYFSVLL

A0A1S3BJU4 uncharacterized protein LOC1034903816.18e-4349.74Show/hide
Query:  HHPSHSSTDS---------------FPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYG-GNFKFNQNPQKDVEEEEINLTKRAME
        HHPS   TD                F GFQ WNT   DVKKKR+LLI+  QLS PT KLP WG + S+S P+G  NFKFN+ P+   E E   LTK  ++
Subjt:  HHPSHSSTDS---------------FPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYG-GNFKFNQNPQKDVEEEEINLTKRAME

Query:  VKEISKLEALMESG---LHISYGHGEDLLEFGSTDEECY---------------RDSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
         KE+S+ +  M+     L  SYGH EDLLEFG+    C                 DSK +FVLSSGRW+VD  +ESKT+KPTIDQEFEQYFSVLL
Subjt:  VKEISKLEALMESG---LHISYGHGEDLLEFGSTDEECY---------------RDSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

A0A6J1CPJ7 uncharacterized protein LOC1110135565.10e-11798.8Show/hide
Query:  EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME
        EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME
Subjt:  EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALME

Query:  SGLHISYGHGEDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSE--SKTLKPTIDQEFEQYFSVLL
        SGLHISYGHGEDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSE  SKTLKPTIDQEFEQYFSVLL
Subjt:  SGLHISYGHGEDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSE--SKTLKPTIDQEFEQYFSVLL

A0A6J1GGJ6 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like1.06e-4954.05Show/hide
Query:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESG
        HHPSH  T SF  FQPW+T  FDVKKKRKLL E  QLS PTPKLP WGP+ S +SFPYG  +FKFN+   K   E E +LTK A E K++S  E  ++  
Subjt:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESG

Query:  -------LHISYGHGEDLLEFGST-DEECYR--------------DSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
               L ++YGH EDLLEFGS  +   Y               DS HDFVLSSGRW++DP +ESK + PTIDQEFEQYFS +L
Subjt:  -------LHISYGHGEDLLEFGST-DEECYR--------------DSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

A0A6J1IMA5 protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like6.20e-4855.25Show/hide
Query:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAM--EVKEISKLEALME
        HHPSH  T SF GFQPW+T  FDVKKKRKLL E  QLS PTPKLP WGP+ S +SFPYG  +FKFN+   K  EE E +LTK A   EV+   + + + +
Subjt:  HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPS-VSFPYG-GNFKFNQNPQKDVEEEEINLTKRAM--EVKEISKLEALME

Query:  SGLHISYGHGEDLLEFGSTD-----EECYRDS----------KHDF-VLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL
          L ++YGH EDLLEFGS       E+C  DS           HDF VLSSGRW++DP +ESK + P IDQEFEQYFS +L
Subjt:  SGLHISYGHGEDLLEFGSTD-----EECYRDS----------KHDF-VLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL

SwissProt top hitse value%identityAlignment
A8MR65 Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE8.3e-0548.08Show/hide
Query:  EFGSTDEECYRDSKHDFVLSSGRWNV-DPPSESKTLKPTIDQEFEQYFSVLL
        EF   D +   +    ++LSS RW+V +  S+  T KPTIDQEFEQYFS L+
Subjt:  EFGSTDEECYRDSKHDFVLSSGRWNV-DPPSESKTLKPTIDQEFEQYFSVLL

Q8S4Q6 Protein FAR-RED ELONGATED HYPOCOTYL 12.9e-0567.57Show/hide
Query:  FVLSSGRW--NVDPPSESKTLKPTIDQEFEQYFSVLL
        FVLSSGRW  N D  +  +T KPTIDQEFEQYFS L+
Subjt:  FVLSSGRW--NVDPPSESKTLKPTIDQEFEQYFSVLL

Arabidopsis top hitse value%identityAlignment
AT2G37678.1 far-red elongated hypocotyl 12.0e-0667.57Show/hide
Query:  FVLSSGRW--NVDPPSESKTLKPTIDQEFEQYFSVLL
        FVLSSGRW  N D  +  +T KPTIDQEFEQYFS L+
Subjt:  FVLSSGRW--NVDPPSESKTLKPTIDQEFEQYFSVLL

AT5G02200.1 far-red-elongated hypocotyl1-like5.9e-0648.08Show/hide
Query:  EFGSTDEECYRDSKHDFVLSSGRWNV-DPPSESKTLKPTIDQEFEQYFSVLL
        EF   D +   +    ++LSS RW+V +  S+  T KPTIDQEFEQYFS L+
Subjt:  EFGSTDEECYRDSKHDFVLSSGRWNV-DPPSESKTLKPTIDQEFEQYFSVLL

AT5G02200.2 far-red-elongated hypocotyl1-like5.9e-0648.08Show/hide
Query:  EFGSTDEECYRDSKHDFVLSSGRWNV-DPPSESKTLKPTIDQEFEQYFSVLL
        EF   D +   +    ++LSS RW+V +  S+  T KPTIDQEFEQYFS L+
Subjt:  EFGSTDEECYRDSKHDFVLSSGRWNV-DPPSESKTLKPTIDQEFEQYFSVLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGCAAGAGAGCCACCACCCATCTCACTCTAGCACTGACAGCTTCCCTGGCTTTCAACCATGGAATACAGGAGGGTTTGATGTAAAGAAGAAGAGAAAGCTGCTAATTGA
GCTTGAGCAACTAAGCTTTCCCACACCAAAGCTACCACGTTGGGGTCCAACACCATCAGTTAGCTTTCCCTATGGGGGTAACTTCAAATTCAACCAAAACCCTCAAAAGG
ATGTAGAAGAAGAAGAAATAAATCTTACGAAAAGGGCGATGGAAGTTAAGGAGATATCAAAATTGGAGGCTCTAATGGAGAGTGGGTTGCATATAAGCTATGGCCATGGG
GAAGATCTGCTGGAGTTTGGAAGCACTGATGAGGAATGTTATAGAGACTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAACGTAGACCCCCCCTCAGAATCCAA
GACTCTCAAACCCACCATTGATCAAGAATTTGAGCAGTACTTTTCTGTACTTTTG
mRNA sequenceShow/hide mRNA sequence
GAGCAAGAGAGCCACCACCCATCTCACTCTAGCACTGACAGCTTCCCTGGCTTTCAACCATGGAATACAGGAGGGTTTGATGTAAAGAAGAAGAGAAAGCTGCTAATTGA
GCTTGAGCAACTAAGCTTTCCCACACCAAAGCTACCACGTTGGGGTCCAACACCATCAGTTAGCTTTCCCTATGGGGGTAACTTCAAATTCAACCAAAACCCTCAAAAGG
ATGTAGAAGAAGAAGAAATAAATCTTACGAAAAGGGCGATGGAAGTTAAGGAGATATCAAAATTGGAGGCTCTAATGGAGAGTGGGTTGCATATAAGCTATGGCCATGGG
GAAGATCTGCTGGAGTTTGGAAGCACTGATGAGGAATGTTATAGAGACTCCAAGCATGACTTTGTTTTGTCATCTGGGAGATGGAACGTAGACCCCCCCTCAGAATCCAA
GACTCTCAAACCCACCATTGATCAAGAATTTGAGCAGTACTTTTCTGTACTTTTG
Protein sequenceShow/hide protein sequence
EQESHHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGPTPSVSFPYGGNFKFNQNPQKDVEEEEINLTKRAMEVKEISKLEALMESGLHISYGHG
EDLLEFGSTDEECYRDSKHDFVLSSGRWNVDPPSESKTLKPTIDQEFEQYFSVLL