; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0559 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0559
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptiontetraspanin-8
Genome locationMC01:11932994..11933151
RNA-Seq ExpressionMC01g0559
SyntenyMC01g0559
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587789.1 Tetraspanin-8, partial [Cucurbita argyrosperma subsp. sororia]1.33e-1061.54Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   + R+ L+DGKVCT FN KF RD+V Q   EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
XP_022933577.1 tetraspanin-8 [Cucurbita moschata]1.33e-1061.54Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   + R+ L+DGKVCT FN KF RD+V Q   EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
XP_023007578.1 tetraspanin-8 [Cucurbita maxima]4.93e-1059.62Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   + R+ L+DGKVCT FN KF RD+V +   EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
XP_023531770.1 tetraspanin-8 [Cucurbita pepo subsp. pepo]1.33e-1061.54Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   + R+ L+DGKVCT FN KF RD+V Q   EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
XP_038880175.1 tetraspanin-8-like [Benincasa hispida]9.62e-1059.62Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRV  NK   R R+ L+DGKVC+ FN K+ RD+V+QF  EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
TrEMBL top hitse value%identityAlignment
A0A1S3B8W0 tetraspanin-8-like2.31e-0855.77Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRV  NK   R R+ L+DGKVC  FN  F  ++V+QF  EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
A0A5A7SV27 Tetraspanin-8-like2.31e-0855.77Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRV  NK   R R+ L+DGKVC  FN  F  ++V+QF  EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
A0A6J1BZZ8 tetraspanin-8-like2.39e-0959.62Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   R R+ L+DGKVCT F+ KF   +V+QF  EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
A0A6J1F057 tetraspanin-86.43e-1161.54Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   + R+ L+DGKVCT FN KF RD+V Q   EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
A0A6J1L815 tetraspanin-82.39e-1059.62Show/hide
Query:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
        +SNWLQNRVN NK   + R+ L+DGKVCT FN KF RD+V +   EH SS Q
Subjt:  FSNWLQNRVNKNKKLER-RAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCTCCAACTGGCTCCAGAATCGGGTCAATAAGAACAAAAAACTGGAACGGAGAGCTGGCTTAATGGACGGCAAGGTCTGCACCGGCTTCAACACTAAATTCGGCCGTGA
TTCCGTCCAGCAATTCTGCAACGAACACTCGTCTTCCACTCAG
mRNA sequenceShow/hide mRNA sequence
TTCTCCAACTGGCTCCAGAATCGGGTCAATAAGAACAAAAAACTGGAACGGAGAGCTGGCTTAATGGACGGCAAGGTCTGCACCGGCTTCAACACTAAATTCGGCCGTGA
TTCCGTCCAGCAATTCTGCAACGAACACTCGTCTTCCACTCAG
Protein sequenceShow/hide protein sequence
FSNWLQNRVNKNKKLERRAGLMDGKVCTGFNTKFGRDSVQQFCNEHSSSTQ