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MC01g0629 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0629
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionpentatricopeptide repeat-containing protein At2g36240
Genome locationMC01:12659576..12659795
RNA-Seq ExpressionMC01g0629
SyntenyMC01g0629
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034501.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.43e-1861.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L+ LCNVRKT   +RL ++   KG EP++  Y T +SGYTM GNKVEG+  V+EMLDKE IPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
XP_004140672.1 pentatricopeptide repeat-containing protein At2g36240 [Cucumis sativus]7.45e-1962.5Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L++LCNVRKT   ++L ++   KG EP+   Y T VSGYTM GNKVEG+  V EMLDKEFIPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
XP_022132469.1 pentatricopeptide repeat-containing protein At2g36240 [Momordica charantia]1.09e-1861.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRY-ITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L++LCNV+KT   +RL ++   KG EP+T  Y I +SGYTM GNKVEG+  V+EMLDKEFIPDIA +NR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRY-ITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
XP_022925788.1 pentatricopeptide repeat-containing protein At2g36240 [Cucurbita moschata]1.43e-1861.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L+ LCNVRKT   +RL ++   KG EP++  Y T +SGYTM GNKVEG+  V+EMLDKE IPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
XP_022977415.1 pentatricopeptide repeat-containing protein At2g36240 [Cucurbita maxima]1.43e-1861.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L+ LCNVRKT   +RL ++   KG EP++  Y T +SGYTM GNKVEG+  V+EMLDKE IPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
TrEMBL top hitse value%identityAlignment
A0A0A0KA47 Uncharacterized protein2.13e-1962.5Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L++LCNVRKT   ++L ++   KG EP+   Y T VSGYTM GNKVEG+  V EMLDKEFIPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
A0A1S3CB10 pentatricopeptide repeat-containing protein At2g362403.29e-1861.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L++LCNV KT   ++L ++   KG EP+   Y T VSGYTM GNKVEG+  V EMLDKEFIPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
A0A6J1BT52 pentatricopeptide repeat-containing protein At2g362405.27e-1961.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRY-ITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L++LCNV+KT   +RL ++   KG EP+T  Y I +SGYTM GNKVEG+  V+EMLDKEFIPDIA +NR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRY-ITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
A0A6J1EG86 pentatricopeptide repeat-containing protein At2g362406.94e-1961.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L+ LCNVRKT   +RL ++   KG EP++  Y T +SGYTM GNKVEG+  V+EMLDKE IPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
A0A6J1IM91 pentatricopeptide repeat-containing protein At2g362406.94e-1961.11Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        NS L+ LCNVRKT   +RL ++   KG EP++  Y T +SGYTM GNKVEG+  V+EMLDKE IPDIA YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYIT-VSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
SwissProt top hitse value%identityAlignment
Q9SJN2 Pentatricopeptide repeat-containing protein At2g362404.4e-1145.83Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEP-ETSRYITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        N  LR+LC+   +   +RL ++   KG EP ET+ ++ VSG+T  G + EG+  VNEMLDK+ +PDI  YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEP-ETSRYITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
Arabidopsis top hitse value%identityAlignment
AT2G36240.1 pentatricopeptide (PPR) repeat-containing protein3.1e-1245.83Show/hide
Query:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEP-ETSRYITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR
        N  LR+LC+   +   +RL ++   KG EP ET+ ++ VSG+T  G + EG+  VNEMLDK+ +PDI  YNR
Subjt:  NSFLRNLCNVRKTGRPDRLEIVGIHKGIEP-ETSRYITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTCTTTTCTCCGGAATCTGTGCAATGTAAGGAAAACAGGGAGACCTGATAGGTTGGAGATTGTTGGCATTCACAAGGGGATTGAACCAGAGACCAGTAGATACATTAC
AGTTTCTGGGTACACCATGTTAGGCAACAAGGTGGAAGGGAAAACGCCTGTGAATGAGATGTTGGATAAGGAATTCATACCTGATATTGCAGCATATAACAGGTTC
mRNA sequenceShow/hide mRNA sequence
AACTCTTTTCTCCGGAATCTGTGCAATGTAAGGAAAACAGGGAGACCTGATAGGTTGGAGATTGTTGGCATTCACAAGGGGATTGAACCAGAGACCAGTAGATACATTAC
AGTTTCTGGGTACACCATGTTAGGCAACAAGGTGGAAGGGAAAACGCCTGTGAATGAGATGTTGGATAAGGAATTCATACCTGATATTGCAGCATATAACAGGTTC
Protein sequenceShow/hide protein sequence
NSFLRNLCNVRKTGRPDRLEIVGIHKGIEPETSRYITVSGYTMLGNKVEGKTPVNEMLDKEFIPDIAAYNRF