; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0655 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0655
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationMC01:12829493..12830290
RNA-Seq ExpressionMC01g0655
SyntenyMC01g0655
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON97390.1 Ribonuclease [Trema orientale]2.15e-13570.68Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
        S+V RSVWS+NL+SEF LIRS++ ++PLISMDTEFPGVVI  D  DP +R  +   +Y VLKANVDRL LIQ+GLTLADEEGNLPD GT + YIWEFNF+
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR

Query:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
        DFDVA D +A  S+ELL+RQGIDFE NRD GIDSVRFA+L+M SGLVC+D +SW TFHSAYDFGYLVK+LTRR LP++L  FL  V++FFG  VFDVK+L
Subjt:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL

Query:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
         ++C +L+GGLDRVCE LNVDR IGKSHQAGSDSL+TL AF+K+REVYFS   L+ YAGVL+GLEI
Subjt:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

TQD87132.1 hypothetical protein C1H46_027272 [Malus baccata]1.86e-13569.43Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD
        I+ RSVWS+NLESEFELIRS+I +FPLISMDTEFPGVV+  DP DP  R      +Y +LKANVDRL LIQVGLTL+D+ GNLPDLGT N+YIWEFNFRD
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD

Query:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM
        FDVA D +A  S+ELL+RQGIDFE NRD G+DSVRFA L+M SGLVC+D ++WVTFHS YDFGYLVK+LT+R LP++L  FLNYVR+FFG  V+DVK+L 
Subjt:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM

Query:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++C +L+GGLDRVC+ LNV+R  GKSHQAGSDSL+TL AF+++REVYF    +E YAGVL+GLE+
Subjt:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

XP_008391953.1 probable CCR4-associated factor 1 homolog 11 [Malus domestica]2.65e-13569.43Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD
        I+ RSVWS+NLESEFELIRS+I +FPLISMDTEFPGVV+  DP DP  R      +Y +LKANVDRL LIQVGLTL+D+ GNLPDLGT N+YIWEFNFRD
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD

Query:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM
        FDVA D +A  S+ELL+RQGIDFE NRD G+DSVRFA L+M SGLVC+D ++WVTFHS YDFGYLVK+LT+R LP++L  FLNYVR+FFG  V+DVK+L 
Subjt:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM

Query:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++C +L+GGLDRVC+ LNV+R  GKSHQAGSDSL+TL AF+++REVYF    +E YAGVL+GLE+
Subjt:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

XP_009349767.1 PREDICTED: probable CCR4-associated factor 1 homolog 11 isoform X3 [Pyrus x bretschneideri]5.33e-13569.06Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD
        I+ RSVWS+NLESEFELIRS+I +FPLISMDTEFPGVV+  DP DP  R      +Y +LKANVDRL LIQVGLTL+D+ GNLPDLGT N+YIWEFNFRD
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD

Query:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM
        FDVA D +A  S+ELL+RQGIDFE NRD G+DSVRFA L+M SGLVC+D ++WVTFHS YDFGYLVK+LT+R LP++L  FLNYVR+FFG  V+DVK+L 
Subjt:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM

Query:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++C +L+GGLDRVC+ LNV R  GKSHQAGSDSL+TL AF+++REVYF    +E YAG+L+GLE+
Subjt:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

XP_022132359.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]3.18e-19399.62Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
        SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR

Query:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
        DFDVAHDPYADSSI LLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
Subjt:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL

Query:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
Subjt:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

TrEMBL top hitse value%identityAlignment
A0A2P5D9V9 Poly(A)-specific ribonuclease1.49e-13470.19Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD
        +V RSVWS+NL+SEF LIRS++ ++PLISMDTEFPGVVI  D  DP +R  +   +Y VLKANVDRL LIQ+GLTLADEEGNLPD GT + YIWEFNF+D
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD

Query:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM
        FDVA D +A  S+ELL+RQGIDFE NRD GIDSV+FA+L+M SGLVC+D +SW TFHSAYDFGYLVK+LTRR LP++L  FL  V++FFG  VFDVK+L 
Subjt:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM

Query:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++C +L+GGLDRVCE LNVDR IGKSHQAGSDSL+TL AF+K+REVYFS   L+ YAGVL+GLEI
Subjt:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

A0A2P5FHX6 Poly(A)-specific ribonuclease1.04e-13570.68Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
        S+V RSVWS+NL+SEF LIRS++ ++PLISMDTEFPGVVI  D  DP +R  +   +Y VLKANVDRL LIQ+GLTLADEEGNLPD GT + YIWEFNF+
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR

Query:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
        DFDVA D +A  S+ELL+RQGIDFE NRD GIDSVRFA+L+M SGLVC+D +SW TFHSAYDFGYLVK+LTRR LP++L  FL  V++FFG  VFDVK+L
Subjt:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL

Query:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
         ++C +L+GGLDRVCE LNVDR IGKSHQAGSDSL+TL AF+K+REVYFS   L+ YAGVL+GLEI
Subjt:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

A0A4D6M9V8 Poly(A)-specific ribonuclease2.26e-13470.79Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
        SIVTRSVWS+NLESEFELIRS+I  FPLISMDTEFPGVV+  D  DP  R      +Y VLKANVDRL LIQ+GLTL+D+ GNLP LGT+N ++WEFNFR
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR

Query:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
        DFDV+ D +A  S+ELL+RQGIDFE NR+ GIDSVRFA+L+M SGLVC D +SWVTFHSAYDFGYLVK+LT+RALPE+L  FL  VR+FFG  VFDVK+L
Subjt:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL

Query:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTS-LEVYAGVLFGLEI
        MK+C NLHGGLDRVC+ LNV+R +GKSHQAGSDSL+TL AF+ +REVYF     L  YAGVL+GLE+
Subjt:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTS-LEVYAGVLFGLEI

A0A540LLH9 Poly(A)-specific ribonuclease9.03e-13669.43Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD
        I+ RSVWS+NLESEFELIRS+I +FPLISMDTEFPGVV+  DP DP  R      +Y +LKANVDRL LIQVGLTL+D+ GNLPDLGT N+YIWEFNFRD
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRD

Query:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM
        FDVA D +A  S+ELL+RQGIDFE NRD G+DSVRFA L+M SGLVC+D ++WVTFHS YDFGYLVK+LT+R LP++L  FLNYVR+FFG  V+DVK+L 
Subjt:  FDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLM

Query:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++C +L+GGLDRVC+ LNV+R  GKSHQAGSDSL+TL AF+++REVYF    +E YAGVL+GLE+
Subjt:  KYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

A0A6J1BSV0 Poly(A)-specific ribonuclease1.54e-19399.62Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
        SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR

Query:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
        DFDVAHDPYADSSI LLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
Subjt:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL

Query:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
Subjt:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 113.0e-8960.82Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFNF
        IV R VW+ NLESEF+LIR I+ ++P ISMDTEFPGV+  +D     +RR      Y +LK+NVD L LIQVGLTL+D +GNLPDLG   N  YIWEFNF
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFNF

Query:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY
        RDFDV  DP+A  SIELL+R GIDFE NR  G++S RFA+L+M SGL+C++ +SWVTFHSAYDFGYLVKILTRR LP  L  FL  +R FFG  V+DVK+
Subjt:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY

Query:  LMKYC-PNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        +M++C   L+GGLDRV   L V+R +GK HQAGSDSL+T +AF++MR++YF     E +AGVL+GLE+
Subjt:  LMKYC-PNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

Q9LEU4 Probable CCR4-associated factor 1 homolog 106.8e-7353.76Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR
        SI+ R VW  NL  EF LIR I+ +F  I+MDTEFPGVV+    A  K      + NY  LK NVD LKLIQVGLT +DE GNLP  GT+   IW+FNFR
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFR

Query:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL
        +F++  D YA  SIELL++ GIDF+ N + GID VRF +L+M SG+V +D ISWVTFH  YDFGYLVK+LT + LP     F   + ++F P V+D+K+L
Subjt:  DFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYL

Query:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        M +C  L GGL+R+ E++ V+R +G  HQAGSDSL+TL +FRK++E YF   S E Y GVL+GL +
Subjt:  MKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

Q9LXM2 Probable CCR4-associated factor 1 homolog 93.7e-8760.59Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFN
        ++VTR VW+ NLESEFELI  II ++P ISMDTEFPGV+  SD     +R T  +  Y +LKANVD L LIQVGLTL+D  GNLPDLG   +  +IWEFN
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFN

Query:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK
        FRDFDVA D +A  SIELL+RQGIDFE N  +G++S RFA+L+M SGLVC++ +SWVTFHSAYDFGYL+KILTRR LP  L  F   +R+ FG  V+DVK
Subjt:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK

Query:  YLMKYCP-NLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++MK+C   L GGLDRV   L V+R +GK HQAGSDSL+T  AF++MR++YF     E +AGVL+GLE+
Subjt:  YLMKYCP-NLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

Q9S9P2 Probable CCR4-associated factor 1 homolog 27.7e-7753.56Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIR--RTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFN
        +I  R VW++NLE E  LI   I +FP ++MDTEFPG+V  +  A+P         E NY  LKANV+ LKLIQ+GLTL+DE+GNLP  GTN   IW+FN
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIR--RTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFN

Query:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK
        FR+F+V  D +A  SIELL++  ID E N + G+D+ RFA+LLMGSG+V +D I WVTFH  YDFGYL+K+L+ + LPE++  F + +  FF P+V+D+K
Subjt:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK

Query:  YLMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLE
        YLM +C NL+GGL+++ E+L V R +G SHQAGSDSL+TLR F KM+E +F+ + L+ Y+G LFGL+
Subjt:  YLMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLE

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.5e-7553.18Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVY-IWEFNF
        SI  R VW++NLESE  LIR ++ +FP ++MDTEFPG+V           +T  E +Y  LK NV+ LK+IQ+GLT +DE+GNLP  GT+N Y IW+FNF
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVY-IWEFNF

Query:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY
        R+FD+  D YA  SIELL++ GIDF  N + GIDS RFA+LLM SG+V ++ + WVTFHS YDFGYL+K+LT + LPE   GF   + ++F P V+D+K+
Subjt:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY

Query:  LMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        LMK+C +LHGGL+++ E+L+V+R +G  HQAGSDSL+T   FRK++E +F   S+E Y+GVL+GL +
Subjt:  LMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-7853.56Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIR--RTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFN
        +I  R VW++NLE E  LI   I +FP ++MDTEFPG+V  +  A+P         E NY  LKANV+ LKLIQ+GLTL+DE+GNLP  GTN   IW+FN
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIR--RTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFN

Query:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK
        FR+F+V  D +A  SIELL++  ID E N + G+D+ RFA+LLMGSG+V +D I WVTFH  YDFGYL+K+L+ + LPE++  F + +  FF P+V+D+K
Subjt:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK

Query:  YLMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLE
        YLM +C NL+GGL+++ E+L V R +G SHQAGSDSL+TLR F KM+E +F+ + L+ Y+G LFGL+
Subjt:  YLMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLE

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.5e-7853.56Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIR--RTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFN
        +I  R VW++NLE E  LI   I +FP ++MDTEFPG+V  +  A+P         E NY  LKANV+ LKLIQ+GLTL+DE+GNLP  GTN   IW+FN
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIR--RTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFN

Query:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK
        FR+F+V  D +A  SIELL++  ID E N + G+D+ RFA+LLMGSG+V +D I WVTFH  YDFGYL+K+L+ + LPE++  F + +  FF P+V+D+K
Subjt:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK

Query:  YLMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLE
        YLM +C NL+GGL+++ E+L V R +G SHQAGSDSL+TLR F KM+E +F+ + L+ Y+G LFGL+
Subjt:  YLMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.0e-7653.18Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVY-IWEFNF
        SI  R VW++NLESE  LIR ++ +FP ++MDTEFPG+V           +T  E +Y  LK NV+ LK+IQ+GLT +DE+GNLP  GT+N Y IW+FNF
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVY-IWEFNF

Query:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY
        R+FD+  D YA  SIELL++ GIDF  N + GIDS RFA+LLM SG+V ++ + WVTFHS YDFGYL+K+LT + LPE   GF   + ++F P V+D+K+
Subjt:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY

Query:  LMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        LMK+C +LHGGL+++ E+L+V+R +G  HQAGSDSL+T   FRK++E +F   S+E Y+GVL+GL +
Subjt:  LMKYCPNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-8860.59Show/hide
Query:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFN
        ++VTR VW+ NLESEFELI  II ++P ISMDTEFPGV+  SD     +R T  +  Y +LKANVD L LIQVGLTL+D  GNLPDLG   +  +IWEFN
Subjt:  SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFN

Query:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK
        FRDFDVA D +A  SIELL+RQGIDFE N  +G++S RFA+L+M SGLVC++ +SWVTFHSAYDFGYL+KILTRR LP  L  F   +R+ FG  V+DVK
Subjt:  FRDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVK

Query:  YLMKYCP-NLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        ++MK+C   L GGLDRV   L V+R +GK HQAGSDSL+T  AF++MR++YF     E +AGVL+GLE+
Subjt:  YLMKYCP-NLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.1e-9060.82Show/hide
Query:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFNF
        IV R VW+ NLESEF+LIR I+ ++P ISMDTEFPGV+  +D     +RR      Y +LK+NVD L LIQVGLTL+D +GNLPDLG   N  YIWEFNF
Subjt:  IVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLG--TNNVYIWEFNF

Query:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY
        RDFDV  DP+A  SIELL+R GIDFE NR  G++S RFA+L+M SGL+C++ +SWVTFHSAYDFGYLVKILTRR LP  L  FL  +R FFG  V+DVK+
Subjt:  RDFDVAHDPYADSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKY

Query:  LMKYC-PNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI
        +M++C   L+GGLDRV   L V+R +GK HQAGSDSL+T +AF++MR++YF     E +AGVL+GLE+
Subjt:  LMKYC-PNLHGGLDRVCEILNVDREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATTGTTACCCGATCCGTGTGGTCTAACAATCTTGAATCCGAGTTCGAGCTGATCCGGTCCATTATACACGAGTTTCCGCTGATTTCTATGGACACCGAATTTCCCGG
CGTGGTTATACATTCAGATCCGGCAGATCCGAAAATTCGGCGAACTCGACTGGAGACCAACTACTTCGTTCTAAAGGCCAATGTTGATCGGCTCAAATTGATCCAGGTTG
GGCTTACGCTCGCCGACGAGGAGGGTAATCTTCCGGATTTGGGCACGAACAACGTCTACATTTGGGAATTTAATTTTAGGGATTTCGATGTGGCACATGATCCATACGCT
GACAGTTCGATTGAGTTGTTGAAGCGGCAGGGCATTGATTTTGAGTACAACCGAGACAACGGAATCGATTCTGTTCGTTTCGCCCAATTGTTGATGGGGTCAGGACTCGT
GTGCAGCGATTGTATTTCTTGGGTGACCTTTCATAGCGCTTACGATTTTGGCTACCTAGTAAAGATACTAACCCGAAGGGCTCTACCAGAAGATTTGTTAGGTTTCCTAA
ATTATGTGAGGTTGTTCTTTGGGCCTATGGTTTTCGACGTGAAGTACTTGATGAAATACTGCCCCAATCTGCACGGCGGCCTCGACAGGGTTTGTGAAATTCTCAATGTG
GACCGTGAAATCGGGAAGAGTCATCAGGCTGGCTCAGATAGCTTGGTGACTTTGCGGGCATTCCGGAAGATGAGGGAAGTATATTTTAGCAATACTAGTCTTGAGGTTTA
TGCTGGTGTTTTGTTTGGTTTAGAGATT
mRNA sequenceShow/hide mRNA sequence
TCCATTGTTACCCGATCCGTGTGGTCTAACAATCTTGAATCCGAGTTCGAGCTGATCCGGTCCATTATACACGAGTTTCCGCTGATTTCTATGGACACCGAATTTCCCGG
CGTGGTTATACATTCAGATCCGGCAGATCCGAAAATTCGGCGAACTCGACTGGAGACCAACTACTTCGTTCTAAAGGCCAATGTTGATCGGCTCAAATTGATCCAGGTTG
GGCTTACGCTCGCCGACGAGGAGGGTAATCTTCCGGATTTGGGCACGAACAACGTCTACATTTGGGAATTTAATTTTAGGGATTTCGATGTGGCACATGATCCATACGCT
GACAGTTCGATTGAGTTGTTGAAGCGGCAGGGCATTGATTTTGAGTACAACCGAGACAACGGAATCGATTCTGTTCGTTTCGCCCAATTGTTGATGGGGTCAGGACTCGT
GTGCAGCGATTGTATTTCTTGGGTGACCTTTCATAGCGCTTACGATTTTGGCTACCTAGTAAAGATACTAACCCGAAGGGCTCTACCAGAAGATTTGTTAGGTTTCCTAA
ATTATGTGAGGTTGTTCTTTGGGCCTATGGTTTTCGACGTGAAGTACTTGATGAAATACTGCCCCAATCTGCACGGCGGCCTCGACAGGGTTTGTGAAATTCTCAATGTG
GACCGTGAAATCGGGAAGAGTCATCAGGCTGGCTCAGATAGCTTGGTGACTTTGCGGGCATTCCGGAAGATGAGGGAAGTATATTTTAGCAATACTAGTCTTGAGGTTTA
TGCTGGTGTTTTGTTTGGTTTAGAGATT
Protein sequenceShow/hide protein sequence
SIVTRSVWSNNLESEFELIRSIIHEFPLISMDTEFPGVVIHSDPADPKIRRTRLETNYFVLKANVDRLKLIQVGLTLADEEGNLPDLGTNNVYIWEFNFRDFDVAHDPYA
DSSIELLKRQGIDFEYNRDNGIDSVRFAQLLMGSGLVCSDCISWVTFHSAYDFGYLVKILTRRALPEDLLGFLNYVRLFFGPMVFDVKYLMKYCPNLHGGLDRVCEILNV
DREIGKSHQAGSDSLVTLRAFRKMREVYFSNTSLEVYAGVLFGLEI