CuGenDBv2

Gene ID	MC01g0725
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Actin
Genome location	MC01:13375724..13376053
RNA-Seq Expression	MC01g0725
Synteny	MC01g0725
Gene Ontology terms	GO:0005856 - cytoskeleton (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR004000 - Actin family IPR043129 - ATPase, nucleotide binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

AAW31852.1 actin, partial [Vitis vinifera]

1.31e-70

99.07

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

KAG2716291.1 hypothetical protein I3760_03G117700 [Carya illinoinensis]

9.11e-71

100

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVN
        SLSTFQQVN
Subjt:  SLSTFQQVN

MBA0581152.1 hypothetical protein [Gossypium raimondii]

5.59e-71

99.09

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVNF
        SLSTFQQV F
Subjt:  SLSTFQQVNF

MBA0586819.1 hypothetical protein [Gossypium raimondii]

6.16e-71

99.09

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVNF
        SLSTFQQV F
Subjt:  SLSTFQQVNF

MBA0791601.1 hypothetical protein [Gossypium harknessii]

7.05e-71

98.18

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVNF
        SLSTFQQV F
Subjt:  SLSTFQQVNF

TrEMBL top hits

e value

%identity

Alignment

A0A453K9R0 Uncharacterized protein

3.41e-71

99.08

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVN
        SLSTFQQVN
Subjt:  SLSTFQQVN

A0A7J8NWQ0 Uncharacterized protein

2.70e-71

99.09

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVNF
        SLSTFQQV F
Subjt:  SLSTFQQVNF

A0A7J8PC33 Uncharacterized protein

2.98e-71

99.09

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVNF
        SLSTFQQV F
Subjt:  SLSTFQQVNF

A0A7J9G2G3 Uncharacterized protein

3.41e-71

98.18

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQVNF
        SLSTFQQV F
Subjt:  SLSTFQQVNF

Q5I6Y3 Actin (Fragment)

6.35e-71

99.07

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

SwissProt top hits

e value

%identity

Alignment

P30164 Actin-1

1.5e-55

97.22

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

P30171 Actin-97

1.5e-55

97.22

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

P30172 Actin-100 (Fragment)

1.2e-55

97.22

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

P30173 Actin-101

1.2e-55

97.22

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

P93376 Actin-103 (Fragment)

9.0e-56

99.07

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS+IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQ
        SLSTFQQ
Subjt:  SLSTFQQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G49240.1 actin 8

2.1e-55

95.37

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

AT3G12110.1 actin-11

2.4e-56

96.3

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIG ERFRCPEVLFQPSL+GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

AT3G18780.1 actin 2

9.3e-56

96.3

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQV
Subjt:  SLSTFQQV

AT3G18780.2 actin 2

2.1e-55

95.37

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMF GIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

AT5G09810.1 actin 7

1.1e-56

98.15

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Query:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
        ITIGAERFRCPEVLFQPSLIGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA
Subjt:  ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA

Query:  SLSTFQQV
        SLSTFQQ+
Subjt:  SLSTFQQV

Sequences

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CDS sequence

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ATCACCATCGGAGCTGAGAGATTCCGTTGCCCAGAAGTTTTATTCCAGCCATCGCTCATCGGCATGGAAGCTGCTGGAATCCATGAAACAACCTACAACTCCATCATGAA
GTGTGACGTAGATATCAGAAAGGATCTTTATGGAAACATCGTTCTCAGTGGTGGTTCAACCATGTTCCCTGGCATTGCAGACAGAATGAGCAAGGAAATCACAGCCCTTG
CTCCTAGCAGCATGAAGATCAAGGTTGTTGCTCCACCAGAAAGGAAATACAGTGTCTGGATTGGAGGGTCCATTCTTGCATCTCTAAGCACCTTCCAGCAGGTAAATTTT

mRNA sequence

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Protein sequence

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ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVNF

MC01g0725 (gene) of Bitter gourd (Dali-11) v1 genome