; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g0934 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0934
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description60S ribosomal protein L26
Genome locationMC01:15060204..15061378
RNA-Seq ExpressionMC01g0934
SyntenyMC01g0934
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0042273 - ribosomal large subunit biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005756 - Ribosomal protein L26/L24, eukaryotic/archaeal
IPR005824 - KOW
IPR005825 - Ribosomal protein L24/L26, conserved site
IPR008991 - Translation protein SH3-like domain superfamily
IPR014722 - Ribosomal protein L2, domain 2
IPR041988 - Ribosomal protein L26/L24, KOW domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KCW54759.1 hypothetical protein EUGRSUZ_I00709 [Eucalyptus grandis]6.87e-5574.59Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKD-----------
        MKYNPRV+SSRRKNRKAHF+APSSVRRV+MS+P+S+DLR+KY+VRSMP+RKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKD           
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKD-----------

Query:  -------KGTKFTAEDIMQSVD
               KGTKFTAED+MQ++D
Subjt:  -------KGTKFTAEDIMQSVD

OMO50531.1 Ribosomal protein L26/L24P, eukaryotic/archaeal [Corchorus olitorius]1.48e-5467.81Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRKNRKAHFSAPSSVRR++MS+PLS+DLRSKYNVRSMP+RKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

XP_004141862.1 60S ribosomal protein L26-1 [Cucumis sativus]7.32e-5569.18Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

XP_022132426.1 60S ribosomal protein L26-1 [Momordica charantia]3.12e-5671.23Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

XP_022950899.1 60S ribosomal protein L26-1 [Cucurbita moschata]1.48e-5469.18Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

TrEMBL top hitse value%identityAlignment
A0A059ALW0 KOW domain-containing protein3.32e-5574.59Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKD-----------
        MKYNPRV+SSRRKNRKAHF+APSSVRRV+MS+P+S+DLR+KY+VRSMP+RKDDEVQVVRGTYKGREGKVVQVYR+KWVIHIERITREKD           
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKD-----------

Query:  -------KGTKFTAEDIMQSVD
               KGTKFTAED+MQ++D
Subjt:  -------KGTKFTAEDIMQSVD

A0A0A0KGI0 KOW domain-containing protein3.54e-5569.18Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

A0A1S3B106 60S ribosomal protein L26-13.54e-5569.18Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

A0A5D3CR35 Ribosomal protein L26/L24P, eukaryotic/archaeal3.54e-5569.18Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRK+RKAHFSAPSSVRRVIMS+PLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKW+IHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

A0A6J1BS88 60S ribosomal protein L26-11.51e-5671.23Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------
        MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK            
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREK------------

Query:  ------------------------------DKGTKFTAEDIMQSVD
                                      DKGTKFTAEDIMQSVD
Subjt:  ------------------------------DKGTKFTAEDIMQSVD

SwissProt top hitse value%identityAlignment
P51414 60S ribosomal protein L26-13.5e-4164.38Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------
        MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITRE             
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------

Query:  -----------------------------KDKGTKFTAEDIMQSVD
                                     K+KGTKFT+ED+MQ+VD
Subjt:  -----------------------------KDKGTKFTAEDIMQSVD

P61257 60S ribosomal protein L262.1e-3074.19Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKDKGT
        MK+NP V+S R KNRK HF+APS +RR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK  GT
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKDKGT

Q39411 60S ribosomal protein L265.7e-3659.31Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------
        MKYNPRV+SSRR+NRK HF+A SS RRV MSSPLSTDLR KYNVRSMPIRKDDE Q+VRGTYKGREGK+ QVYRRK VIHIER+TRE             
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------

Query:  -----------------------------KDKGTKFTAEDIMQSV
                                     KDKGTKFTA D+MQ+V
Subjt:  -----------------------------KDKGTKFTAEDIMQSV

Q9FJX2 60S ribosomal protein L26-23.8e-4062.33Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------
        MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITRE             
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------

Query:  -----------------------------KDKGTKFTAEDIMQSVD
                                     K+KGTKF+AED+M++VD
Subjt:  -----------------------------KDKGTKFTAEDIMQSVD

Q9UNX3 60S ribosomal protein L26-like 11.6e-3075.27Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKDKGT
        MK+NP V+S R KNRK HF+APS VRR IMSSPLS +LR KYNVRSMPIRKDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK  GT
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKDKGT

Arabidopsis top hitse value%identityAlignment
AT3G49910.1 Translation protein SH3-like family protein2.5e-4264.38Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------
        MKYNPRV+SSRRKNRKAHF+A SS RRVIMSSPLSTDLR KYNVRSMPIRKDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERITRE             
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------

Query:  -----------------------------KDKGTKFTAEDIMQSVD
                                     K+KGTKFT+ED+MQ+VD
Subjt:  -----------------------------KDKGTKFTAEDIMQSVD

AT5G67510.1 Translation protein SH3-like family protein2.7e-4162.33Show/hide
Query:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------
        MK+NPRVSSSRRKNRKAHF+APSSVRRV+MSSPLS DLR+K+NVRSMPIRKDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERITRE             
Subjt:  MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITRE-------------

Query:  -----------------------------KDKGTKFTAEDIMQSVD
                                     K+KGTKF+AED+M++VD
Subjt:  -----------------------------KDKGTKFTAEDIMQSVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGA
TCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATC
GTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTACAATCCTAGGGTTTCCAGTTCCCGCCGCAAGAACCGCAAGGCGCATTTTTCTGCGCCGTCTAGCGTCCGTCGGGTTATTATGAGTTCTCCTCTCTCCACTGA
TCTCCGTTCTAAGTACAATGTCCGATCCATGCCGATTCGAAAGGATGATGAGGTCCAAGTCGTCCGTGGAACTTACAAGGGCCGGGAGGGCAAGGTAGTGCAGGTCTATC
GTAGAAAATGGGTCATCCACATCGAACGCATCACTCGTGAAAAGGACAAGGGTACCAAGTTCACCGCCGAGGATATCATGCAGAGCGTCGATTAATTTTGAAAATGGTGA
TTTTTAAGTTTATAGAACTGTTATTCTCTTTCATAGTTACCTAGCGTGTTTGTGTTCCAAGATACTAGGAAGAATTTCCTCGGACCTGTGGCTATAATTGTCGACTTTGG
AGGCCTTGATTTATGGCATTTTAATCACATTTTGTTATTCCAATGCGCTGCCCTTCCGGTTTTATTATTACTGTTTCTAGTCTTTCAATTTGCTTATTTGATATTGCAGA
TGCCTATTTATAATAAATGCTTTATGATGTAGGTTATGGATGATTTGTTTATATTGATAGGGGTTCTTACAACTCAACCTTATGCACTCGGTTAACTGAATTTTCTTATT
TGTTGGGAGCACCTAGTACATGTTATCTTTGAATGTGGGAATTGAACACTTGTTCCTGTGATTTGATCTAATCTTGCAGTCTTCAGCATTTATTTCATTTAACTCACTCT
TTTCTGGTCATGGTAAGAACAAAGTTCATTCCAAAAGATAGTGATACATTACATTATTCTTCCCAGAAGATAACTATTCTCGTGTTACACAATTGTTAATGGGTGCTGTG
ATGATTATCTAATTTTGGATTAACTTCGTCCTGATTTAGTTTCCTTGGCTTTGAATTATAATGTTGTAATCGTTATCGACTGTCCCTTTAGTTTTCCTGGCCAACTCTTT
TTTCACTCTGTATGATTTATGCGTTTTACTTTAGAAGTTTTGTGTATGGATTCCGATCC
Protein sequenceShow/hide protein sequence
MKYNPRVSSSRRKNRKAHFSAPSSVRRVIMSSPLSTDLRSKYNVRSMPIRKDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKDKGTKFTAEDIMQSVD