CuGenDBv2

Gene ID	MC01g0946
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Ribulose bisphosphate carboxylase large chain
Genome location	MC01:15141500..15141733
RNA-Seq Expression	MC01g0946
Synteny	MC01g0946
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0009507 - chloroplast (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domains	IPR000685 - Ribulose bisphosphate carboxylase, large subunit, C-terminal IPR036376 - Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

ADX25616.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Asplenium ruta-muraria]

4.60e-47

80.9

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDR+RGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

AYE84506.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Adiantum mendoncae]

7.59e-47

82.02

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Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

CAK12836.1 ribulose 1,5 biphosphate carboxylase/oxygenase, partial [Podalyria sericea]

7.32e-47

82.02

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Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD++VEKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

QOS02286.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Megalastrum sp. 1 JN-2020]

7.83e-47

82.02

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Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

YP_009777026.1 NADH dehydrogenase subunit J [Quercus coccinea]

1.13e-46

82.02

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Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

TrEMBL top hits

e value

%identity

Alignment

A0A386T8V9 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment)

3.68e-47

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

A0A6H1YI06 NADH dehydrogenase subunit J

5.49e-47

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

A0A7M1VHH5 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment)

3.79e-47

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

A4V8H0 Ribulose 1,5 biphosphate carboxylase/oxygenase (Fragment)

3.54e-47

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD++VEKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

F1D860 Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit (Fragment)

2.23e-47

80.9

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDR+RGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

SwissProt top hits

e value

%identity

Alignment

O62943 Ribulose bisphosphate carboxylase large chain

1.0e-37

83.15

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+YVEKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

P28430 Ribulose bisphosphate carboxylase large chain (Fragment)

1.0e-37

83.15

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+YVEKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

P36476 Ribulose bisphosphate carboxylase large chain

1.3e-37

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

P43223 Ribulose bisphosphate carboxylase large chain (Fragment)

1.3e-37

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+Y+EKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

P93998 Ribulose bisphosphate carboxylase large chain (Fragment)

1.0e-37

83.15

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+YVEKDRSRGIYFTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

Arabidopsis top hits

e value

%identity

Alignment

ATCG00490.1 ribulose-bisphosphate carboxylases

2.1e-38

82.02

Show/hide

Query:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE
        FVDLLRD+YVEKDRSRGI+FTQDWV           GIH+WHMPALTEIFGDD VLQFGGGTLGHPWGNAP AVANRVALEACVQARNE
Subjt:  FVDLLRDEYVEKDRSRGIYFTQDWV-----------GIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

Sequences

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CDS sequence

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TTTGTTGATTTACTTCGTGATGAGTATGTTGAAAAAGATCGAAGCCGCGGTATTTATTTCACTCAAGATTGGGTTGGTATTCACATTTGGCATATGCCTGCTCTGACCGA
GATTTTTGGAGATGATTTTGTACTACAATTCGGAGGAGGAACTTTAGGGCACCCTTGGGGTAATGCACCTAGTGCCGTAGCTAATCGAGTAGCTCTAGAAGCATGTGTAC
AAGCTCGTAATGAA

mRNA sequence

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Protein sequence

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FVDLLRDEYVEKDRSRGIYFTQDWVGIHIWHMPALTEIFGDDFVLQFGGGTLGHPWGNAPSAVANRVALEACVQARNE

MC01g0946 (gene) of Bitter gourd (Dali-11) v1 genome