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MC01g0954 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g0954
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionStimulated by retinoic acid protein
Genome locationMC01:15191501..15191878
RNA-Seq ExpressionMC01g0954
SyntenyMC01g0954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036397.1 hypothetical protein E6C27_scaffold18G001980 [Cucumis melo var. makuwa]2.63e-2247.59Show/hide
Query:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNP-SAKGIRPEDDNDPFLAAYRECTKSVKIAKF
        HRKVLS GN+    +  PG+SK          L  +SSS           H   S IPPPPCR P  N  SAK    E+ +DPFL AY+ECTKSVK    
Subjt:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNP-SAKGIRPEDDNDPFLAAYRECTKSVKIAKF

Query:  QRATKGAVVKKSKLF--NFSCKSFHSCDVRD-DGFFKLRRDTIHV
               VVKKSK F   FSCK+  SCD+ D + FFKL RDTIHV
Subjt:  QRATKGAVVKKSKLF--NFSCKSFHSCDVRD-DGFFKLRRDTIHV

KAF4375181.1 hypothetical protein F8388_017327 [Cannabis sativa]5.70e-2244.29Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKAP--------LSFNSSSIAHDFVST---------IPPPPCRRPNTNPS----AKGIRPEDDNDPFLAAYRECTKSV
        MSHRKV S G++PFSWE+KPGISK          L   SS      +S          IP PPC  P+  PS    AKG++ ++D  PFL AY+ECTK  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKAP--------LSFNSSSIAHDFVST---------IPPPPCRRPNTNPS----AKGIRPEDDNDPFLAAYRECTKSV

Query:  KIAKFQRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL
        K    ++A+K   V+K+    FSCKS  SCDVR++ F KL
Subjt:  KIAKFQRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL

KAG6594957.1 hypothetical protein SDJN03_11510, partial [Cucurbita argyrosperma subsp. sororia]5.50e-3253.96Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKA-------PLSFNS---SSIAHDFVSTIPPPPCR-RPNT--NPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQRA
        MSH+K+ S GNVPFSWEEKPGISK        PL  +S    S   D     PPPPCR +P +  N S KG R E+D  PFL AY+ECTKSVK  K    
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKA-------PLSFNS---SSIAHDFVSTIPPPPCR-RPNT--NPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQRA

Query:  TKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKLRRDTIHV
            V KKSKLF F CKSF SC++RD   FKL RD+I V
Subjt:  TKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKLRRDTIHV

KGN48633.1 hypothetical protein Csa_003745 [Cucumis sativus]3.76e-2547.55Show/hide
Query:  HRKVLSHGNV-PFSWEEKPGISK------APLSFNSSSIA----------HDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ
        HRK+LS GN+ P   +  PG+SK        L  +SSSI           H   S IPPPPCR P    +A   + E D DPFL AY+ECTKSVK     
Subjt:  HRKVLSHGNV-PFSWEEKPGISK------APLSFNSSSIA----------HDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ

Query:  RATKGAVVKKSKLF--NFSCKSFHSCDVRDDGFFKLRRDTIHV
              VVKKSK     FSCK+ HSCD+ D+ FFKL RDTIHV
Subjt:  RATKGAVVKKSKLF--NFSCKSFHSCDVRDDGFFKLRRDTIHV

POO00665.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_032960 [Trema orientale]2.94e-2343.57Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKAP---------------LSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA
        MSHRKV S G++PFSWE+KPGISK                 L    +  +H    TIP PPC   + P+ + S KG++ ++D  PFL AY+ECTK +K  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKAP---------------LSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA

Query:  KF---QRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL
        K    Q+  KG  VKKS    FSCKS  +C+V+D+ F KL
Subjt:  KF---QRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL

TrEMBL top hitse value%identityAlignment
A0A0A0KGJ1 Uncharacterized protein1.82e-2547.55Show/hide
Query:  HRKVLSHGNV-PFSWEEKPGISK------APLSFNSSSIA----------HDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ
        HRK+LS GN+ P   +  PG+SK        L  +SSSI           H   S IPPPPCR P    +A   + E D DPFL AY+ECTKSVK     
Subjt:  HRKVLSHGNV-PFSWEEKPGISK------APLSFNSSSIA----------HDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQ

Query:  RATKGAVVKKSKLF--NFSCKSFHSCDVRDDGFFKLRRDTIHV
              VVKKSK     FSCK+ HSCD+ D+ FFKL RDTIHV
Subjt:  RATKGAVVKKSKLF--NFSCKSFHSCDVRDDGFFKLRRDTIHV

A0A2P5FS81 Uncharacterized protein1.42e-2343.57Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKAP---------------LSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA
        MSHRKV S G++PFSWE+KPGISK                 L    +  +H    TIP PPC   + P+ + S KG++ ++D  PFL AY+ECTK +K  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKAP---------------LSFNSSSIAHDFVSTIPPPPC---RRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIA

Query:  KF---QRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL
        K    Q+  KG  VKKS    FSCKS  +C+V+D+ F KL
Subjt:  KF---QRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL

A0A5D3CLL9 Uncharacterized protein1.27e-2247.59Show/hide
Query:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNP-SAKGIRPEDDNDPFLAAYRECTKSVKIAKF
        HRKVLS GN+    +  PG+SK          L  +SSS           H   S IPPPPCR P  N  SAK    E+ +DPFL AY+ECTKSVK    
Subjt:  HRKVLSHGNVPFSWEEKPGISK--------APLSFNSSS---------IAHDFVSTIPPPPCRRPNTNP-SAKGIRPEDDNDPFLAAYRECTKSVKIAKF

Query:  QRATKGAVVKKSKLF--NFSCKSFHSCDVRD-DGFFKLRRDTIHV
               VVKKSK F   FSCK+  SCD+ D + FFKL RDTIHV
Subjt:  QRATKGAVVKKSKLF--NFSCKSFHSCDVRD-DGFFKLRRDTIHV

A0A7J6I4Y5 Uncharacterized protein2.76e-2244.29Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKAP--------LSFNSSSIAHDFVST---------IPPPPCRRPNTNPS----AKGIRPEDDNDPFLAAYRECTKSV
        MSHRKV S G++PFSWE+KPGISK          L   SS      +S          IP PPC  P+  PS    AKG++ ++D  PFL AY+ECTK  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKAP--------LSFNSSSIAHDFVST---------IPPPPCRRPNTNPS----AKGIRPEDDNDPFLAAYRECTKSV

Query:  KIAKFQRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL
        K    ++A+K   V+K+    FSCKS  SCDVR++ F KL
Subjt:  KIAKFQRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL

A0A803PEU5 Uncharacterized protein2.76e-2244.29Show/hide
Query:  MSHRKVLSHGNVPFSWEEKPGISKAP--------LSFNSSSIAHDFVST---------IPPPPCRRPNTNPS----AKGIRPEDDNDPFLAAYRECTKSV
        MSHRKV S G++PFSWE+KPGISK          L   SS      +S          IP PPC  P+  PS    AKG++ ++D  PFL AY+ECTK  
Subjt:  MSHRKVLSHGNVPFSWEEKPGISKAP--------LSFNSSSIAHDFVST---------IPPPPCRRPNTNPS----AKGIRPEDDNDPFLAAYRECTKSV

Query:  KIAKFQRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL
        K    ++A+K   V+K+    FSCKS  SCDVR++ F KL
Subjt:  KIAKFQRATKGAVVKKSKLFNFSCKSFHSCDVRDDGFFKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCACAGAAAGGTCCTTTCCCATGGAAACGTTCCCTTTTCTTGGGAGGAAAAGCCCGGAATTTCCAAGGCGCCGCTCTCCTTCAATTCCTCCTCCATTGCCCACGA
CTTTGTTTCCACGATTCCTCCGCCGCCGTGCCGCCGCCCCAACACAAACCCCTCCGCCAAGGGAATCCGGCCGGAGGACGACAACGACCCTTTTCTCGCCGCCTACAGGG
AGTGCACAAAAAGTGTCAAAATTGCCAAATTTCAGAGAGCAACCAAAGGGGCCGTTGTGAAGAAGAGTAAGTTGTTCAATTTTTCTTGCAAGAGCTTTCATTCTTGTGAT
GTGAGAGACGATGGATTTTTCAAGCTTCGTAGAGATACAATTCATGTT
mRNA sequenceShow/hide mRNA sequence
ATGAGCCACAGAAAGGTCCTTTCCCATGGAAACGTTCCCTTTTCTTGGGAGGAAAAGCCCGGAATTTCCAAGGCGCCGCTCTCCTTCAATTCCTCCTCCATTGCCCACGA
CTTTGTTTCCACGATTCCTCCGCCGCCGTGCCGCCGCCCCAACACAAACCCCTCCGCCAAGGGAATCCGGCCGGAGGACGACAACGACCCTTTTCTCGCCGCCTACAGGG
AGTGCACAAAAAGTGTCAAAATTGCCAAATTTCAGAGAGCAACCAAAGGGGCCGTTGTGAAGAAGAGTAAGTTGTTCAATTTTTCTTGCAAGAGCTTTCATTCTTGTGAT
GTGAGAGACGATGGATTTTTCAAGCTTCGTAGAGATACAATTCATGTT
Protein sequenceShow/hide protein sequence
MSHRKVLSHGNVPFSWEEKPGISKAPLSFNSSSIAHDFVSTIPPPPCRRPNTNPSAKGIRPEDDNDPFLAAYRECTKSVKIAKFQRATKGAVVKKSKLFNFSCKSFHSCD
VRDDGFFKLRRDTIHV