CuGenDBv2

Gene ID	MC01g1006
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	TPR_REGION domain-containing protein
Genome location	MC01:15635008..15635595
RNA-Seq Expression	MC01g1006
Synteny	MC01g1006
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001440 - Tetratricopeptide repeat 1 IPR011990 - Tetratricopeptide-like helical domain superfamily IPR019734 - Tetratricopeptide repeat

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604067.1 hypothetical protein SDJN03_04676, partial [Cucurbita argyrosperma subsp. sororia]

6.30e-112

89.29

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
         SSALKSLDVALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

XP_022132455.1 uncharacterized protein LOC111005306 [Momordica charantia]

1.22e-128

100

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
        QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

XP_022950520.1 uncharacterized protein LOC111453603 [Cucurbita moschata]

1.27e-112

89.29

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
         SSALKSLDVALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

XP_022978825.1 uncharacterized protein LOC111478668 [Cucurbita maxima]

1.73e-110

87.24

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EA+IQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS DYAKKA+ EAETALSLSP+DPASHILKALAL+HMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
         SSALKSLD+ALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

XP_023543662.1 uncharacterized protein LOC111803474 [Cucurbita pepo subsp. pepo]

6.31e-113

89.29

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
        QSSALKSLDVALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA++AFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

TrEMBL top hits

e value

%identity

Alignment

A0A2P6RPV8 Putative tetratricopeptide-like helical domain-containing protein

5.40e-76

64.62

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        E ++QVAL ILT A   A+ +LSK+A  K+R  NRA LQ++RHF  G+ LL RARST  ++QS  +AK ALTEAE ALSLSP+DP  HILKALALD +GH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRL--GVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVD
        ++SAL+SLD ALSPPC+KSL+ RE G+AL+KRAELK+A+NR+RR+DSAVEDL+EAV L  G  D   FCLLGQCYE K M+DEA++AFE+ALT+D
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRL--GVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVD

A0A5E4EZ55 PREDICTED

6.50e-76

62.31

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        E ++Q+ L ILT A   A+ ++S++A  K+R  NRA LQS+RHF +G+HLL RARS   ++QS  +AK ALTEAE AL+LSP+DP  HILKALALD +GH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGV---QDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
        ++SALKS DVALSPPC+KSLS RE G+AL+KRAELKI +NR+RR+DSAVEDL++AVRL      D   FCLLGQCYEWK MK+EA++AFE+AL  +P S
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGV---QDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

A0A6J1BSI1 uncharacterized protein LOC111005306

5.93e-129

100

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
        QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

A0A6J1GFZ7 uncharacterized protein LOC111453603

6.16e-113

89.29

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EAMIQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARSTSQQSQS DYAKKAL EAETALSLSP+DPASHILKALAL+HMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
         SSALKSLDVALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

A0A6J1IRB2 uncharacterized protein LOC111478668

8.37e-111

87.24

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        EA+IQVALFILTAAT+LAVRELSKRAFGKVR KNRAILQSSRHF EGTHLLARARS SQQSQS DYAKKA+ EAETALSLSP+DPASHILKALAL+HMGH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
         SSALKSLD+ALSPPCLKSLS +E+ KAL+KRAELKIAVNRKRRLDSAVEDLL+AV LG  D K FCLLGQCYEWK+MKDEA+QAFEKALTVDPES
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G65520.1 Tetratricopeptide repeat (TPR)-like superfamily protein

2.4e-46

53.03

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Query:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH
        E +IQ A+ +LT     A++ LS+R   K R K+RA LQ+ R   + + LLARAR+T ++SQS   AK ALTEA+  +++SP D A HI++ALALD +GH
Subjt:  EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGH

Query:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRL--GVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES
         +SALKS D+AL+ P LKSLS  E   AL+KRAE+K+AVNR+RR+DSAVEDL EAVRL  G    + F LLG+CYE+K +K++A+ AF +AL   P S
Subjt:  QSSALKSLDVALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRL--GVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

Sequences

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CDS sequence

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GAAGCAATGATACAAGTAGCCCTCTTCATCCTAACAGCAGCGACGTTGTTGGCCGTACGTGAACTTTCCAAACGAGCTTTCGGGAAGGTCCGCCCTAAGAATCGCGCGAT
TCTCCAGTCGAGCCGCCACTTCTTCGAGGGAACACATCTTCTGGCTCGGGCACGGTCAACCTCTCAACAATCACAATCCTTCGACTACGCGAAGAAAGCACTAACCGAAG
CCGAAACGGCGCTCTCCCTTTCCCCCAAAGATCCGGCATCTCACATCTTGAAAGCCCTAGCCCTAGATCACATGGGCCATCAGAGCTCCGCGCTTAAATCACTCGACGTC
GCACTCTCTCCGCCGTGCTTGAAGTCTCTATCTGGCAGAGAACTCGGGAAGGCGTTGATTAAGCGAGCCGAGTTGAAGATCGCCGTGAATCGGAAACGGCGACTCGACTC
GGCGGTGGAAGACTTGTTGGAGGCGGTGAGACTGGGCGTACAAGACCCGAAAGGCTTCTGTCTTTTGGGGCAATGTTACGAGTGGAAGCAAATGAAAGACGAGGCCAAGC
AGGCTTTCGAAAAGGCCCTAACTGTGGATCCTGAATCC

mRNA sequence

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Protein sequence

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EAMIQVALFILTAATLLAVRELSKRAFGKVRPKNRAILQSSRHFFEGTHLLARARSTSQQSQSFDYAKKALTEAETALSLSPKDPASHILKALALDHMGHQSSALKSLDV
ALSPPCLKSLSGRELGKALIKRAELKIAVNRKRRLDSAVEDLLEAVRLGVQDPKGFCLLGQCYEWKQMKDEAKQAFEKALTVDPES

MC01g1006 (gene) of Bitter gourd (Dali-11) v1 genome