; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1034 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1034
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPolyadenylate-binding protein
Genome locationMC01:15886205..15890427
RNA-Seq ExpressionMC01g1034
SyntenyMC01g1034
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]8.66e-13894.79Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA VSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        +RR M+YMPYY
Subjt:  FRRSMQYMPYY

KAG7026854.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma]4.09e-13894.79Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA VSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        +RR M+YMPYY
Subjt:  FRRSMQYMPYY

XP_022132734.1 polyadenylate-binding protein 3-like isoform X1 [Momordica charantia]8.00e-145100Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        FRRSMQYMPYY
Subjt:  FRRSMQYMPYY

XP_022962974.1 polyadenylate-binding protein 3-like [Cucurbita moschata]4.09e-13894.79Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA VSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        +RR M+YMPYY
Subjt:  FRRSMQYMPYY

XP_023003098.1 polyadenylate-binding protein 3-like [Cucurbita maxima]5.81e-13894.79Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDMSAADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GAAVSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        +RR M+YMPYY
Subjt:  FRRSMQYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein6.86e-13793.87Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEE D+DMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQE+KEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG-YGKAP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEA+QEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG YGK P
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG-YGKAP

Query:  RFRRSMQYMPYY
        RFRR M+YMPYY
Subjt:  RFRRSMQYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like1.19e-13794.81Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEE D+DMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAG+AVSQE+KEE DSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG-YGKAP
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEF+EAEAVQEALLLNE+ELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG YGK P
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG-YGKAP

Query:  RFRRSMQYMPYY
        RFRR M+YMPYY
Subjt:  RFRRSMQYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X13.87e-145100Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        FRRSMQYMPYY
Subjt:  FRRSMQYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like1.98e-13894.79Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGA VSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        +RR M+YMPYY
Subjt:  FRRSMQYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like2.81e-13894.79Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ
        M+EEEHEVYGGEIPVEE DVDMSAADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDP GAAVSQE+KEETDSRSVFVGNVDYACTPEEVQ
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQ

Query:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR
        QHFQSCGTVNRVTILTDKFG PKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGK PR
Subjt:  QHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPR

Query:  FRRSMQYMPYY
        +RR M+YMPYY
Subjt:  FRRSMQYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 25.4e-3352.87Show/hide
Query:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+++         +KE  D++SV+VGNVDY+ TPEE+Q HF SCG+VNRVTIL DKF 
Subjt:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKF-

Query:  GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY
        GHPKGFAY+EF E   V  ALLLN S LH R LKV  KRTNVPGM +   +     R     GYR R     PY
Subjt:  GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQ-----RYNPYMGYRSRRPYVPPY

Q93VI4 Polyadenylate-binding protein 18.8e-6864.32Show/hide
Query:  EEEEHEVYGGEIP-VEEADVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSR
        +E+EHEVYGGEIP  EE ++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSR
Subjt:  EEEEHEVYGGEIP-VEEADVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP

Query:  YVPPYFYSPYGYGKAPRFRRSMQYMPY
         VP  FY PY YG+ PRFRR M+Y PY
Subjt:  YVPPYFYSPYGYGKAPRFRRSMQYMPY

Q9DDY9 Polyadenylate-binding protein 2-A2.1e-3244.29Show/hide
Query:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAA---VSQENKEETDSRSVFVGNVDYACTPE
        +EEEE     G+  +E+              EL+ +K R++EMEEEA  L+E+Q +VEK+M     P  A    +S E K E D+RS++VGNVDY  T E
Subjt:  MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAA---VSQENKEETDSRSVFVGNVDYACTPE

Query:  EVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMK---QYFPQ-RYNP-YMGYRSRRPYVPPYFYS
        E++ HF  CG+VNRVTIL DKF GHPKGFAY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+    + FP+ RY      Y SR  +   Y   
Subjt:  EVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMK---QYFPQ-RYNP-YMGYRSRRPYVPPYFYS

Query:  PYGYGKAPRFRRSMQYMPY
        P G     R R +  Y PY
Subjt:  PYGYGKAPRFRRSMQYMPY

Q9FJN9 Polyadenylate-binding protein 24.1e-8978.64Show/hide
Query:  MEEEEHEVYGGEIP----------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNV
        MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIP----------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY

Query:  SPYGYGKAPRFRRSMQYMPY
        SPYGYGKAPRFRR M+YMPY
Subjt:  SPYGYGKAPRFRRSMQYMPY

Q9LX90 Polyadenylate-binding protein 35.2e-9281.02Show/hide
Query:  MEEEEHEVYGGEIP------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + D+DMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  YGKAPRFRRSMQYMPY
        YGKAPRFRR M+YMPY
Subjt:  YGKAPRFRRSMQYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.7e-9381.02Show/hide
Query:  MEEEEHEVYGGEIP------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + D+DMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  YGKAPRFRRSMQYMPY
        YGKAPRFRR M+YMPY
Subjt:  YGKAPRFRRSMQYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-8580.69Show/hide
Query:  MEEEEHEVYGGEIP------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYAC
        MEEEEHEVYGGEIP      V + D+DMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA QDPA  A +QE KEE D+RSV+VGNVDYAC
Subjt:  MEEEEHEVYGGEIP------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYAC

Query:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG
        TPEEVQ HFQ+CGTVNRVTIL DKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV  KRTNVPGMKQY P R+NP MGYR RRP+VPPYFYSPYG
Subjt:  TPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYG

Query:  YG
        YG
Subjt:  YG

AT5G51120.1 polyadenylate-binding protein 16.3e-6964.32Show/hide
Query:  EEEEHEVYGGEIP-VEEADVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSR
        +E+EHEVYGGEIP  EE ++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QDP+G  VS   KEE DSR
Subjt:  EEEEHEVYGGEIP-VEEADVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSR

Query:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP
        S++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EAVQ +L+LNESELHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P
Subjt:  SVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRP

Query:  YVPPYFYSPYGYGKAPRFRRSMQYMPY
         VP  FY PY YG+ PRFRR M+Y PY
Subjt:  YVPPYFYSPYGYGKAPRFRRSMQYMPY

AT5G51120.2 polyadenylate-binding protein 13.3e-6254.17Show/hide
Query:  EEEEHEVYGGEIP-VEEADVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------
        +E+EHEVYGGEIP  EE ++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP-VEEADVDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ------------------

Query:  -------------------DPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESE
                           +   + VS   KEE DSRS++VGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFG PKGFAYVEF+E EAVQ +L+LNESE
Subjt:  -------------------DPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESE

Query:  LHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPRFRRSMQYMPY
        LHGRQ+KV  KRTNVPGM+Q F  R  P+   R   P VP  FY PY YG+ PRFRR M+Y PY
Subjt:  LHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPRFRRSMQYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-9078.64Show/hide
Query:  MEEEEHEVYGGEIP----------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNV
        MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA QDPA  A +Q  KEE D+RSVFVGNV
Subjt:  MEEEEHEVYGGEIP----------VEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNV

Query:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY
        DYACTPEEVQQHFQ+CGTV+RVTILTDKFG PKGFAYVEF+E EAVQEAL LNESELHGRQLKV QKRTNVPG+KQ+  +R+NPYMGYR RRP++ PY Y
Subjt:  DYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFY

Query:  SPYGYGKAPRFRRSMQYMPY
        SPYGYGKAPRFRR M+YMPY
Subjt:  SPYGYGKAPRFRRSMQYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATTCCGGTAGAGGAGGCGGATGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAA
GAAGCGGTTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTCGCGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCGGGTGCTGCTGTAAGCC
AAGAAAACAAGGAGGAGACAGATTCACGATCCGTGTTTGTTGGCAACGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCACTTCCAATCATGTGGTACTGTCAAC
AGGGTGACTATTCTTACAGATAAATTTGGCCATCCGAAGGGCTTTGCATATGTCGAGTTCCTCGAAGCTGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTT
GCATGGAAGACAATTAAAGGTTCAACAAAAGCGGACTAACGTCCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGGTCCCGGAGGCCTT
ATGTGCCGCCTTATTTTTACTCACCATATGGATATGGGAAGGCACCCCGTTTCCGAAGGTCTATGCAATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
CAAATGTACAAATTTGATCCCTAGACAAGCTTTTTATGGATCTTTGCTAAACTAAAGTATGTAATTAGCTAGGTAAAATTTTACTGGTAGTTGGTGGAGTGGGTCGAAGA
TTGGCTGAGCCCAGACATGAGATCTAGTGGGCCGGCCCATGTGATTAACCCGAGTACATAGGCCCAGCACAGGCCTGAACCTCGTGATCGCACCGCCTCATCCAAATTGA
TCACGAAAACGCAGTTGTAGGGTGAAAGCGCTGTCTCATCAGTCATCAGACTGAAATAATTCTGCTATTCGGGTCGAAGTATTTGGGCTTCAGAGAGGGAGTCCTCTGCT
GGACTTCGGTTGACACGCGTTGGGATCCGAACGACTACGTGTGAAATGAGTCCTTCTCTGATTCACTGTTGTATATAAAATGGTCCACGCTTCAGATTTCCGGATTACCC
TATATCGTGTTGCGACTTGCGACGCTGGTTCAGGCACAGGCTGAGGTAGGTAGCAAGTGAAGAACAGTAATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATTCC
GGTAGAGGAGGCGGATGTTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGCGGTTGAAGGAGATGGAGGAGGAAGCAGCTGCTCTTC
GCGAAATGCAAGCCAAGGTTGAAAAGGAAATGGGCGCTGTTCAAGATCCTGCGGGTGCTGCTGTAAGCCAAGAAAACAAGGAGGAGACAGATTCACGATCCGTGTTTGTT
GGCAACGTTGATTATGCATGTACACCTGAAGAAGTGCAGCAGCACTTCCAATCATGTGGTACTGTCAACAGGGTGACTATTCTTACAGATAAATTTGGCCATCCGAAGGG
CTTTGCATATGTCGAGTTCCTCGAAGCTGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTAAAGGTTCAACAAAAGCGGACTAACG
TCCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGGTCCCGGAGGCCTTATGTGCCGCCTTATTTTTACTCACCATATGGATATGGGAAG
GCACCCCGTTTCCGAAGGTCTATGCAATACATGCCATACTACTAGGAGGGTTTTGCCCATAATTTGAATATCATGTGAAACAATATATATAGATGACTTTACCCTGATTT
AGAATGGATAGAACTATGGATTTGATTATCTTCAGCCTTGCCTGTTGCAATTGCATAATGATCTAATGTATGAGATATGATAGATAGTTCGTCAGGTCAGGAACCTATTT
CTTTACCATGCTTCTGCTGTATGATGTTTTGGAAATGGGATTTCAAACTTTTTAGCAGTTTAAAGCCTTATGGGTAGTAGTTTTGCTGGAACTTCGATTTGCTATTTGCT
GCTGTCTTCTGTAACTTTTGTACAGGTACTTCCGAGGAGAGATGCTAATGGTTTATGATGTCAAATTTAATTTTACTGACGAGAGATAAGTTAAAATTAGGAACCACAAA
GCAACTACCTAGACATATAAGGGTGCAAGTAAAAAG
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEEADVDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPAGAAVSQENKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVN
RVTILTDKFGHPKGFAYVEFLEAEAVQEALLLNESELHGRQLKVQQKRTNVPGMKQYFPQRYNPYMGYRSRRPYVPPYFYSPYGYGKAPRFRRSMQYMPYY