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MC01g1077 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1077
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase RHA2B-like
Genome locationMC01:16163052..16163273
RNA-Seq ExpressionMC01g1077
SyntenyMC01g1077
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036272.1 putative E3 ubiquitin-protein ligase RHA2B [Cucumis melo var. makuwa]1.07e-4490.54Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIE++NPTIRFSNK+T S ADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

XP_022132528.1 E3 ubiquitin-protein ligase RHA2B-like [Momordica charantia]4.15e-49100Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

XP_022963436.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita moschata]1.38e-4794.59Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEE+NPTIRFSNK+TSSPADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

XP_023003552.1 E3 ubiquitin-protein ligase RHA2B-like isoform X1 [Cucurbita maxima]7.96e-4793.24Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEE+NPTIRFSNK+TSSPADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCR KVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

XP_038883588.1 E3 ubiquitin-protein ligase RHA2B-like [Benincasa hispida]2.58e-4694.59Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEE+NPTIRFSNKLTSS ADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

TrEMBL top hitse value%identityAlignment
A0A0A0KM08 RING-type domain-containing protein5.20e-4590.54Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIE++NPTIRFSNK+T S ADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

A0A5A7SYH1 Putative E3 ubiquitin-protein ligase RHA2B5.20e-4590.54Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIE++NPTIRFSNK+T S ADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

A0A6J1BWI1 E3 ubiquitin-protein ligase RHA2B-like2.01e-49100Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

A0A6J1HG49 E3 ubiquitin-protein ligase RHA2B-like isoform X16.68e-4894.59Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEE+NPTIRFSNK+TSSPADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

A0A6J1KMW2 E3 ubiquitin-protein ligase RHA2B-like isoform X13.85e-4793.24Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        LIEE+NPTIRFSNK+TSSPADQCAVCLSEFEEG+KVRKLQCNHTFHKDCLDNWLKLCFATCPLCR KVLPDD+V
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

SwissProt top hitse value%identityAlignment
Q0VD51 E3 ubiquitin-protein ligase RNF132.0e-1152Show/hide
Query:  DQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP
        D CA+CL E+E+GDK+R L C+H +H  C+D WL     TCP+C+ KV+P
Subjt:  DQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP

Q8LPN7 E3 ubiquitin-protein ligase RING1-like1.1e-1243.94Show/hide
Query:  PTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        PT++ +  +  S  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD

Q9XF92 Brassinosteroid-responsive RING protein 11.2e-1146.75Show/hide
Query:  LIEERNPTIRFSNKLTSSPAD---QCAVCLSEFEEGDKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDV
        LI E  P I+F  +LT+S  D    CAVCL EFE   ++R L+ C H FH+ CLD W+     TCPLCR+  +PD++
Subjt:  LIEERNPTIRFSNKLTSSPAD---QCAVCLSEFEEGDKVRKLQ-CNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDV

Q9ZT50 E3 ubiquitin-protein ligase RHA2A6.4e-1357.69Show/hide
Query:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        C VCLS+ +EG++VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V
Subjt:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

Q9ZU51 E3 ubiquitin-protein ligase RHA2B2.9e-1345.71Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP
        L ++ N    FS + + + A  C VCLS+ + G++VRKL C H FHK CL+ WL+     CPLCRS +LP
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP

Arabidopsis top hitse value%identityAlignment
AT1G15100.1 RING-H2 finger A2A4.5e-1457.69Show/hide
Query:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV
        C VCLS+ +EG++VRKL+C H FHK CL+ WL     TCPLCRS ++ DD V
Subjt:  CAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV

AT2G01150.1 RING-H2 finger protein 2B2.0e-1445.71Show/hide
Query:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP
        L ++ N    FS + + + A  C VCLS+ + G++VRKL C H FHK CL+ WL+     CPLCRS +LP
Subjt:  LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLP

AT3G19950.1 RING/U-box superfamily protein7.7e-1443.94Show/hide
Query:  PTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        PT++ +  +  S  +QCAVC+ EFE+G  V+++ C H FH+DCL  WL+L   +CP+CR ++  DD
Subjt:  PTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD

AT3G62690.1 AtL52.2e-1348.53Show/hide
Query:  ERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKL-QCNHTFHKDCLDNWLKLCFATCPLCRSKVLP
        E+ P   +S K   SP ++C+VCLSEFEE D+ R L +C H FH DC+D W +   ++CPLCR+ V P
Subjt:  ERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKL-QCNHTFHKDCLDNWLKLCFATCPLCRSKVLP

AT5G45290.1 RING/U-box superfamily protein2.2e-1345.31Show/hide
Query:  IRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD
        I+   K  S    QC +CL E+EE D +R L C+H FHK C+D WLK     CPLCR  +   D
Subjt:  IRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTGATCGAGGAGAGGAATCCGACGATTCGATTCTCCAATAAGCTAACCTCGAGTCCCGCCGATCAGTGCGCCGTTTGCCTCTCTGAATTTGAGGAAGGCGATAAGGTACG
GAAATTACAATGCAATCACACTTTTCACAAGGACTGCCTCGACAATTGGTTGAAACTCTGTTTCGCTACCTGTCCGCTTTGCCGGAGTAAGGTTCTGCCGGACGATGTGG
TC
mRNA sequenceShow/hide mRNA sequence
TTGATCGAGGAGAGGAATCCGACGATTCGATTCTCCAATAAGCTAACCTCGAGTCCCGCCGATCAGTGCGCCGTTTGCCTCTCTGAATTTGAGGAAGGCGATAAGGTACG
GAAATTACAATGCAATCACACTTTTCACAAGGACTGCCTCGACAATTGGTTGAAACTCTGTTTCGCTACCTGTCCGCTTTGCCGGAGTAAGGTTCTGCCGGACGATGTGG
TC
Protein sequenceShow/hide protein sequence
LIEERNPTIRFSNKLTSSPADQCAVCLSEFEEGDKVRKLQCNHTFHKDCLDNWLKLCFATCPLCRSKVLPDDVV