; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1126 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1126
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptiontRNA-methyltransferase non-catalytic subunit trm6MTase subunit
Genome locationMC01:16597182..16597862
RNA-Seq ExpressionMC01g1126
SyntenyMC01g1126
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603959.1 hypothetical protein SDJN03_04568, partial [Cucurbita argyrosperma subsp. sororia]1.68e-8765.37Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K FR TEVF  +AF  W F+RLPL +RVSSDYISQISG+F+S +FGF+LCNTI++ALI+ P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA +SLSLPG+EP GRLCSD E EEI YEDKEVISEVSS  AAA  E ++  S G   L     E  G +  R  VEE EAIWGGG+  ESV  GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_022950349.1 uncharacterized protein LOC111453461 [Cucurbita moschata]1.12e-8564.5Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K  RFTEVF  +AF  W F+RLPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAAL-----IENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA +SLSLPG+ P GRLCSD E EEI YEDKEVISEVSS  A      IE+    S  L     E  G +  R  VE  EAIWGGG+  ESV  GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAAL-----IENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_022977278.1 uncharacterized protein LOC111477644 [Cucurbita maxima]3.59e-8966.23Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K FRFTEVF  +A   W F+RLPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG+K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA +SLSLPG+EP GRLCSD E EEI YEDKEVISEVSS  AAA  E ++  S G   L     E  G +  R  VEE EAIWGGG+  ESV  GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_023543998.1 uncharacterized protein LOC111803706 [Cucurbita pepo subsp. pepo]3.69e-8464.5Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K  RFTEV   +AF  W F+RLPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA +SLSLPG+EP GRLCSD E EEI YEDKEVISEV S  AAA  E ++  S G   L     E  G    R  VE  EAIWGGG+  ESV  GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIAREL+FR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

XP_038882287.1 uncharacterized protein LOC120073519 [Benincasa hispida]1.73e-9065.52Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTE++ AMGV   L+I+VKIFRFTEV V + F FW F+RLPL +RVS DYISQIS +F+  VFGF+LCNTI+VALIA P  FSG K++ D+VETE+FNE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALI-----ENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA  SLSLPG+EPIGRLCSD  +EEI YEDKEVISEV S  A I     ++    S  L     E  G + RRL  EE EAIWGGG S ESVW+GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALI-----ENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVLR
        ELSNKEFQ RI+AFIARELRFR EESGAV+LR
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVLR

TrEMBL top hitse value%identityAlignment
A0A0A0KM84 Uncharacterized protein5.77e-8263.52Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGD-SVETEIFN
        MKT E+ AMGV   L+I+VKIFRFTEV V + F  W F+RLPL +RVSSD+ISQIS +F+S VFGF+LCN I+V+LIA P  FS  K+  D +VET +FN
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGD-SVETEIFN

Query:  ELVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSA--AALIENMDG---SSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYG
        ELVE+GA +SLSL G+EP GRLCSD E+EEI YEDKEVISEV+S   A   E M+     S  L  L  E  G +LRR+  EE EAIWGGG+S E V  G
Subjt:  ELVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSA--AALIENMDG---SSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYG

Query:  EELSNKEFQERIEAFIARELRFRREESGAVVLR
        EELSNKEF+ RI+AFIARELRFR EESGAVVLR
Subjt:  EELSNKEFQERIEAFIARELRFRREESGAVVLR

A0A1S3B3G2 uncharacterized protein LOC1034853512.87e-8262.66Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN
        MKTE + AMGV   L+ +VKIFRFTEV   + F  W F+RLPL ++VSSD+ISQIS +F+S VFGF+LCN I+V+LIA P  FSG K+ GD+ VETE+FN
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN

Query:  ELVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALI-----ENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYG
        ELVE+GA +SLSL G+EP GRLCSD E+E+I YEDKEVISEV+S  A +     EN    S  L  +  E  G +LRRL  EE EAIWGGG+S E V   
Subjt:  ELVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALI-----ENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYG

Query:  EELSNKEFQERIEAFIARELRFRREESGAVVLR
        EELSN EFQ RI+AFIARELRFR EESGAVVLR
Subjt:  EELSNKEFQERIEAFIARELRFRREESGAVVLR

A0A5A7SYQ4 Putative TRNA--methyltransferase non-catalytic subunit trm6MTase subunit trm62.87e-8262.66Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN
        MKTE + AMGV   L+ +VKIFRFTEV   + F  W F+RLPL ++VSSD+ISQIS +F+S VFGF+LCN I+V+LIA P  FSG K+ GD+ VETE+FN
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDS-VETEIFN

Query:  ELVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALI-----ENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYG
        ELVE+GA +SLSL G+EP GRLCSD E+E+I YEDKEVISEV+S  A +     EN    S  L  +  E  G +LRRL  EE EAIWGGG+S E V   
Subjt:  ELVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALI-----ENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYG

Query:  EELSNKEFQERIEAFIARELRFRREESGAVVLR
        EELSN EFQ RI+AFIARELRFR EESGAVVLR
Subjt:  EELSNKEFQERIEAFIARELRFRREESGAVVLR

A0A6J1GFJ2 uncharacterized protein LOC1114534615.41e-8664.5Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K  RFTEVF  +AF  W F+RLPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAAL-----IENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA +SLSLPG+ P GRLCSD E EEI YEDKEVISEVSS  A      IE+    S  L     E  G +  R  VE  EAIWGGG+  ESV  GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAAL-----IENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

A0A6J1IPH9 uncharacterized protein LOC1114776441.74e-8966.23Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        MKTEE+ AMG+  +LR L+K FRFTEVF  +A   W F+RLPL +RVSSDYISQISG+F+S VFGF+LCNTI++ALIA P RFSG+K  GD+VETE+ NE
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE
        LV++GA +SLSLPG+EP GRLCSD E EEI YEDKEVISEVSS  AAA  E ++  S G   L     E  G +  R  VEE EAIWGGG+  ESV  GE
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSS--AAALIENMDGSSPG---LGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGE

Query:  ELSNKEFQERIEAFIARELRFRREESGAVVL
        ELSNKEF+ RI+AFIARELRFR EESGAVVL
Subjt:  ELSNKEFQERIEAFIARELRFRREESGAVVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34560.1 unknown protein1.2e-0422.22Show/hide
Query:  LRILVKIFRFTEVFVGLAFFFWIFNRLPL-AVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSG----QKLAGDSVETEIFNELVENGAGSS
        +R    +FR  E    L     + ++L   +V++S D   + + F  S  F F + N IV+ L+A   R+S      K A ++   +++ E +       
Subjt:  LRILVKIFRFTEVFVGLAFFFWIFNRLPL-AVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSG----QKLAGDSVETEIFNELVENGAGSS

Query:  LSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALIENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGEELSNKEFQERIEAF
          +   +        P   + V   +    +   A   +E+ +G        M   V EK  R+   +K+ +    + V+    G  +SN++F+ +IEAF
Subjt:  LSLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALIENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGEELSNKEFQERIEAF

Query:  IARELRFRREESGAVV
        IAR+ R +++E   ++
Subjt:  IARELRFRREESGAVV

AT5G66440.1 unknown protein1.7e-1630.95Show/hide
Query:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE
        +K E+  A+        + + FR  EV V L F FW F++LP  V++S  ++ +I+   S+ +F F+L N+IVV L+      +   +A  S ETEI+  
Subjt:  MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNE

Query:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVI-SEVSSAAALI--ENM---------------------DGSSPGLGCLMPENVGEKLRRLAVE
         V   +  + S P +E +         E IVY+DK+VI +++ S   L   ENM                     D S      ++   +   L+R   E
Subjt:  LVENGAGSSLSLPGNEPIGRLCSDPEKEEIVYEDKEVI-SEVSSAAALI--ENM---------------------DGSSPGLGCLMPENVGEKLRRLAVE

Query:  E--KEAIWGGGISVESVWYGEELSNKEFQERIEAFIARELRFRREESGAVVL
        +  KE         E  +  ++LSN+EFQ+ IEAFIA++  FRR+ES AVV+
Subjt:  E--KEAIWGGGISVESVWYGEELSNKEFQERIEAFIARELRFRREESGAVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAGAGGAAATTGGAGCAATGGGAGTGTGTGGTAATCTCCGAATTTTGGTGAAAATTTTCCGATTTACAGAGGTTTTTGTGGGGCTGGCATTTTTTTTCTGGAT
ATTTAATCGCCTCCCTTTGGCCGTCAGAGTTTCGAGCGATTACATTTCTCAAATATCCGGCTTCTTTTCCAGCTCTGTTTTTGGCTTCGTACTCTGCAACACTATTGTCG
TCGCTCTAATTGCCAACCCCGACCGTTTCTCCGGCCAAAAACTCGCCGGTGACAGTGTTGAAACCGAAATCTTTAATGAATTGGTCGAAAACGGCGCTGGAAGTTCACTG
TCTTTGCCTGGAAATGAGCCAATTGGCCGGCTCTGCTCTGACCCAGAGAAGGAAGAGATTGTGTACGAGGACAAGGAGGTCATTTCCGAGGTGAGCTCGGCGGCAGCCTT
AATTGAAAATATGGATGGTTCCAGTCCGGGTTTAGGTTGTCTGATGCCGGAAAACGTTGGAGAAAAGTTACGGCGGCTAGCGGTGGAGGAGAAGGAGGCGATTTGGGGAG
GAGGGATTTCGGTGGAAAGTGTGTGGTACGGCGAGGAGTTGAGCAACAAGGAATTTCAGGAAAGAATAGAAGCGTTCATCGCCAGGGAATTGAGGTTTCGCCGGGAAGAG
TCCGGTGCCGTCGTCCTCCGC
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAGAGGAAATTGGAGCAATGGGAGTGTGTGGTAATCTCCGAATTTTGGTGAAAATTTTCCGATTTACAGAGGTTTTTGTGGGGCTGGCATTTTTTTTCTGGAT
ATTTAATCGCCTCCCTTTGGCCGTCAGAGTTTCGAGCGATTACATTTCTCAAATATCCGGCTTCTTTTCCAGCTCTGTTTTTGGCTTCGTACTCTGCAACACTATTGTCG
TCGCTCTAATTGCCAACCCCGACCGTTTCTCCGGCCAAAAACTCGCCGGTGACAGTGTTGAAACCGAAATCTTTAATGAATTGGTCGAAAACGGCGCTGGAAGTTCACTG
TCTTTGCCTGGAAATGAGCCAATTGGCCGGCTCTGCTCTGACCCAGAGAAGGAAGAGATTGTGTACGAGGACAAGGAGGTCATTTCCGAGGTGAGCTCGGCGGCAGCCTT
AATTGAAAATATGGATGGTTCCAGTCCGGGTTTAGGTTGTCTGATGCCGGAAAACGTTGGAGAAAAGTTACGGCGGCTAGCGGTGGAGGAGAAGGAGGCGATTTGGGGAG
GAGGGATTTCGGTGGAAAGTGTGTGGTACGGCGAGGAGTTGAGCAACAAGGAATTTCAGGAAAGAATAGAAGCGTTCATCGCCAGGGAATTGAGGTTTCGCCGGGAAGAG
TCCGGTGCCGTCGTCCTCCGC
Protein sequenceShow/hide protein sequence
MKTEEIGAMGVCGNLRILVKIFRFTEVFVGLAFFFWIFNRLPLAVRVSSDYISQISGFFSSSVFGFVLCNTIVVALIANPDRFSGQKLAGDSVETEIFNELVENGAGSSL
SLPGNEPIGRLCSDPEKEEIVYEDKEVISEVSSAAALIENMDGSSPGLGCLMPENVGEKLRRLAVEEKEAIWGGGISVESVWYGEELSNKEFQERIEAFIARELRFRREE
SGAVVLR