| GenBank top hits | e value | %identity | Alignment |
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| KAG6594716.1 DNA-directed RNA polymerases IV and V subunit 4, partial [Cucurbita argyrosperma subsp. sororia] | 1.18e-74 | 89.23 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDT DEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
AL+PSLKSK+ KLTEPLNNVLSELAK+KSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| XP_022133315.1 DNA-directed RNA polymerases IV and V subunit 4-like [Momordica charantia] | 5.76e-81 | 96.15 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| XP_023003382.1 DNA-directed RNA polymerases IV and V subunit 4-like [Cucurbita maxima] | 2.04e-75 | 90 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDTIDEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
AL+PSLKSK+ KLTEPLNNVLSELAK+KSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| XP_023517145.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X1 [Cucurbita pepo subsp. pepo] | 1.18e-74 | 89.23 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDT DEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
AL+PSLKSK+ KLTEPLNNVLSELAK+KSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| XP_023517147.1 DNA-directed RNA polymerases IV and V subunit 4-like isoform X2 [Cucurbita pepo subsp. pepo] | 1.03e-74 | 89.23 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDT DEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
AL+PSLKSK+ KLTEPLNNVLSELAK+KSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KH45 RPOL4c domain-containing protein | 1.29e-73 | 87.69 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGL YAKRANHYVN ESVRPVLETLK++GVTDSEICVIANVCPDT DEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
ALLPSLK K+ KL+EP+NNVLSELAKVKSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| A0A1S3B2C2 DNA-directed RNA polymerases IV and V subunit 4 isoform X1 | 4.51e-74 | 87.69 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGL YAKRANHYVN ESVRPVLETLK++G+TDSEICVIANVCPDT DEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
ALLPSLK+K+ KL+EPLNNVLSELAKVKSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| A0A1S3B2C7 DNA-directed RNA polymerases IV and V subunit 4 isoform X2 | 3.96e-74 | 87.69 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMV LSADPTIKIPTSFDRGL YAKRANHYVN ESVRPVLETLK++G+TDSEICVIANVCPDT DEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
ALLPSLK+K+ KL+EPLNNVLSELAKVKSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| A0A6J1BUW9 DNA-directed RNA polymerases IV and V subunit 4-like | 2.79e-81 | 96.15 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| A0A6J1KMD1 DNA-directed RNA polymerases IV and V subunit 4-like | 9.88e-76 | 90 | Show/hide |
Query: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
L L ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGL YAKRANHYVNTESVRPVLETLK++GV DSEICVIANVCPDTIDEVF
Subjt: LALNGRAELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVF
Query: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
AL+PSLKSK+ KLTEPLNNVLSELAK+KSS
Subjt: ALLPSLKSKKGKLTEPLNNVLSELAKVKSS
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O15514 DNA-directed RNA polymerase II subunit RPB4 | 4.3e-04 | 28.07 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L Q + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
Query: PLNNVLSELAKVKS
L +L ++ +S
Subjt: PLNNVLSELAKVKS
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| O48890 DNA-directed RNA polymerase II subunit 4 | 2.3e-18 | 37.61 | Show/hide |
Query: VKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK-KG
+K +CLM+CE + +L+ +Q+ +S DP ++ F++ L Y KR + Y N ++VR V E L +H +T+ E+CV+ N+CP+T++E A++PSLK+K +
Subjt: VKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSK-KG
Query: KLTEPLNNVLSELAKVK
E + +L++L+ VK
Subjt: KLTEPLNNVLSELAKVK
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| Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 4.5e-06 | 32.91 | Show/hide |
Query: SFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTEPLNNVLSELAK
+F + L YA++ + Y N S++ V L + + + EI +AN+CP+ DE +L+PSLK + + + + LS L K
Subjt: SFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTEPLNNVLSELAK
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| Q6DBA5 DNA-directed RNA polymerases IV and V subunit 4 | 4.1e-31 | 52.85 | Show/hide |
Query: ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLK
+LP+N +C+MDCEA Q+L GI+ Q+V LS DP+IKIP S+DR L Y + HY N +SVR VLE LK +G++D E+CVIAN +++DEV A +PSLK
Subjt: ELPKNVKCQCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLK
Query: SKKGKLTEPLNNVLSELAKVKSS
+KK + +PL + L EL+K+K S
Subjt: SKKGKLTEPLNNVLSELAKVKSS
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| Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 4.3e-04 | 28.07 | Show/hide |
Query: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
+ L++ E LL+ + Q SA+ ++ F + L Y R + + N E++ V L Q + E+ +AN+CP+T +E AL+PSL+ + E
Subjt: QCLMDCEAAQLLQGIQDQMVLLSADPTIKIPTSFDRGLLYAKRANHYVNTESVRPVLETLKQHGVTDSEICVIANVCPDTIDEVFALLPSLKSKKGKLTE
Query: PLNNVLSELAKVKS
L +L ++ +S
Subjt: PLNNVLSELAKVKS
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