; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1347 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1347
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionactin-related protein 8-like
Genome locationMC01:18128964..18129734
RNA-Seq ExpressionMC01g1347
SyntenyMC01g1347
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR019954 - Ubiquitin conserved site
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134970.1 ubiquitin domain-containing protein 7SL RNA1 [Cucumis sativus]6.76e-8767.65Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVA-----------------------PSDHN
        MDVI  P KG  F IEVG+FDTVLEIKEKI+KY  IPIPKQTLIFNG +LQDDRDVEFCEILQ+SRI+L+VA                       PS H+
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVA-----------------------PSDHN

Query:  NSSSNNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSV
          S   +  N+N       KLKVMVKPKCG+ KIPMEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNG++
Subjt:  NSSSNNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSV

Query:  TGGS
        TGGS
Subjt:  TGGS

XP_008439960.1 PREDICTED: uncharacterized protein LOC103484590 [Cucumis melo]2.98e-8870.2Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSD--------------HN---NSSSNN
        MDVI  P +G  F IEVG+FDTVLEIKEKI+KYH IPIPKQTLIFNG +LQDDRDVEFCEILQ+SRI+L+VA S+              HN   + SS++
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSD--------------HN---NSSSNN

Query:  NNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        +  +   +  +S KLKVMVKPKCGS KIPMEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNG++TGGS
Subjt:  NNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

XP_022142282.1 actin-related protein 8-like [Momordica charantia]1.71e-11270.43Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA--------
        MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA        
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA--------

Query:  --------------------------------------------------------------------GSSKKLKVMVKPKCGSQKIPMEVNASDNVGEL
                                                                            GSSKKLKVMVKPKCGSQKIPMEVNASDNVGEL
Subjt:  --------------------------------------------------------------------GSSKKLKVMVKPKCGSQKIPMEVNASDNVGEL

Query:  KKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        KKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
Subjt:  KKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

XP_022950206.1 biquitin domain-containing protein 7SL RNA1-like [Cucurbita moschata]1.51e-8560.89Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNN-----------
        MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCEILQ+SRI+L+VA    NNS S    + N+           
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNN-----------

Query:  --------------NAA-----------------------------------------GSSK-KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQ
                      NAA                                         GSSK KLKVMV+PK G+ KIPMEVN +DNVGELKKELQKLQQ
Subjt:  --------------NAA-----------------------------------------GSSK-KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQ

Query:  RLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        RLHFHLP EGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSV+GGS
Subjt:  RLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

XP_038881479.1 ubiquitin domain-containing protein 7SL RNA1-like [Benincasa hispida]3.43e-8666.36Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSD-------------HNN---------
        MDVIF P +G  F IEVGFFDTVLEIKEKI+KYH IPIPKQ+LIFNG +LQD RDVEFCEILQ+SRI+L+VA S+              NN         
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSD-------------HNN---------

Query:  ---------SSSNNNNNNNNNAAGSSK--KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHG
                 +SS NNNNNN+++  ++   KLKVMVKPK G+ KI MEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDRSFRWHGVAHG
Subjt:  ---------SSSNNNNNNNNNAAGSSK--KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHG

Query:  DTIEIFNGSVTGGS
        DTIEIFNG+VTGGS
Subjt:  DTIEIFNGSVTGGS

TrEMBL top hitse value%identityAlignment
A0A1S3AZZ9 uncharacterized protein LOC1034845901.44e-8870.2Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSD--------------HN---NSSSNN
        MDVI  P +G  F IEVG+FDTVLEIKEKI+KYH IPIPKQTLIFNG +LQDDRDVEFCEILQ+SRI+L+VA S+              HN   + SS++
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSD--------------HN---NSSSNN

Query:  NNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        +  +   +  +S KLKVMVKPKCGS KIPMEVN +DNVGELKKEL+KLQQR+ FHLP EGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNG++TGGS
Subjt:  NNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

A0A6J1CMB8 actin-related protein 8-like8.26e-11370.43Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA--------
        MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA        
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAA--------

Query:  --------------------------------------------------------------------GSSKKLKVMVKPKCGSQKIPMEVNASDNVGEL
                                                                            GSSKKLKVMVKPKCGSQKIPMEVNASDNVGEL
Subjt:  --------------------------------------------------------------------GSSKKLKVMVKPKCGSQKIPMEVNASDNVGEL

Query:  KKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        KKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
Subjt:  KKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

A0A6J1GE65 biquitin domain-containing protein 7SL RNA1-like7.33e-8660.89Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNN-----------
        MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCEILQ+SRI+L+VA    NNS S    + N+           
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNN-----------

Query:  --------------NAA-----------------------------------------GSSK-KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQ
                      NAA                                         GSSK KLKVMV+PK G+ KIPMEVN +DNVGELKKELQKLQQ
Subjt:  --------------NAA-----------------------------------------GSSK-KLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQ

Query:  RLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        RLHFHLP EGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSV+GGS
Subjt:  RLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

A0A6J1IPZ4 biquitin domain-containing protein 7SL RNA1-like9.01e-8458.59Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNN-------NNN------
        MDV+F P KG  F IEVGFFDTVLEIKEKIQKYH IPIPKQTLIFNGHVLQDDRDVEFCEILQ+SRI+L+VA    NNS S +        N++      
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNN-------NNN------

Query:  ----------------NNNAA---------------------------------------------GSSK-KLKVMVKPKCGSQKIPMEVNASDNVGELK
                         +NA+                                             GSSK KLKVMV+PK G+ KIPMEVN +DNVGELK
Subjt:  ----------------NNNAA---------------------------------------------GSSK-KLKVMVKPKCGSQKIPMEVNASDNVGELK

Query:  KELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS
        KELQKLQQRLHFHLP EGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSV+GGS
Subjt:  KELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS

A0A6P4PD81 UV excision repair protein rhp23-like isoform X24.50e-8163.03Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVA-----------------------PSDHN
        MDVIFE  KG+ F+IEVGFFDTVLEIKEKI KYH IPIP QTLIFNG+VLQDDRDVE+CEILQNSRI+L+V+                       PS   
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVA-----------------------PSDHN

Query:  NSSSNNNNNNNNNAAGSS-------KKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTI
        N+  N+N  ++N    S        KKLK++V PKCG++KIP+EVNA+DNV EL+KELQKL QRL FHLPQEG+FFIY ++VMD+DRSFRWH V  GDTI
Subjt:  NSSSNNNNNNNNNAAGSS-------KKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTI

Query:  EIFNGSVTGGS
        EIFNGSVTGGS
Subjt:  EIFNGSVTGGS

SwissProt top hitse value%identityAlignment
P0CG70 Polyubiquitin7.0e-0527.97Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKV
        M +  +   G+  T+EV   DT+  +K+KIQ    IP  +Q LIF G  L+D R +    I + S + L++                     G    +++
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKV

Query:  MVKPKCGSQKIPMEVNASDNVGELKKELQKL------QQRLHF
         VK   G + I +EV +SD +  +K+++Q        QQRL F
Subjt:  MVKPKCGSQKIPMEVNASDNVGELKKELQKL------QQRLHF

P59669 Polyubiquitin5.4e-0529.37Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKV
        M +  +   G+  T+EV   DT+  +K KIQ    IP  +Q LIF G  L+D R +    I + S + L+V                     G    +++
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKV

Query:  MVKPKCGSQKIPMEVNASDNVGELKKELQKL------QQRLHF
         VK   G + I +EV ASD +  +K ++Q        QQRL F
Subjt:  MVKPKCGSQKIPMEVNASDNVGELKKELQKL------QQRLHF

Q58G87 Polyubiquitin 34.1e-0528.67Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKV
        M +  +   G+  T+EV F DT+  +K KIQ    IP  +Q LIF G  L+D R +    I + S + L++                     G    +++
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKV

Query:  MVKPKCGSQKIPMEVNASDNVGELKKELQKL------QQRLHF
         VK   G + I +EV +SD +  +K ++Q        QQRL F
Subjt:  MVKPKCGSQKIPMEVNASDNVGELKKELQKL------QQRLHF

Q9ZQZ6 Ubiquitin domain-containing protein 7SL RNA29.1e-1328.96Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQ--------------------------------------DDRDVEFCEIL
        M+V  +   G  F+I + F +TVL+IKEKI+K   IP+ KQ L  +G  L+                                      DD+  EFC I 
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQ--------------------------------------DDRDVEFCEIL

Query:  QNS---RIKLIVAPSDHNNSSS-----------------------NNNNNNNNNAAGSS---------------KKLK-------VMVKP-KCGSQKIPM
         +S   ++  ++A   HN  SS                        N        A +S               KK+K       V VKP +  ++ I +
Subjt:  QNS---RIKLIVAPSDHNNSSS-----------------------NNNNNNNNNAAGSS---------------KKLK-------VMVKP-KCGSQKIPM

Query:  EVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEI
        EVNA DNV EL+KEL K+Q+R   +LP E F  +     + E +SF+W+ VA GDTIE+
Subjt:  EVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEI

Q9ZT95 Ubiquitin domain-containing protein 7SL RNA13.7e-1428.08Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQ---------------------------------------DDRDVEFCEI
        M+V  +   G  F+I + F +TVLEIKEKI+K   IP+ KQ L  +G  L+                                       DD+  EFC I
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQ---------------------------------------DDRDVEFCEI

Query:  LQNS-----------------------------------------RIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLK-------VMVKP-KCGSQKIP
          +S                                         R   +V P++  ++S        ++ +   KK+K       V VKP +  ++ I 
Subjt:  LQNS-----------------------------------------RIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLK-------VMVKP-KCGSQKIP

Query:  MEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEI
        +EVNA DNV EL+KEL K+Q+R   +LP E F  +     + E +SF+W+ VA GDTIEI
Subjt:  MEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEI

Arabidopsis top hitse value%identityAlignment
AT4G02950.1 Ubiquitin family protein1.3e-1729.86Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDH---------NNSSSNNNN------
        + VI E   G  FTI+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+I  NSRI L ++P D+         N S S  +N      
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDH---------NNSSSNNNN------

Query:  NNNNN-------------------------------------------------------AAGS-----------------------------SKKLKVM
        NN ++                                                       A GS                             + K+ VM
Subjt:  NNNNN-------------------------------------------------------AAGS-----------------------------SKKLKVM

Query:  VKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFI--YDRDVMDEDRSFRWHGVAHGDTIEIFNGSV
        ++P   ++ I +EV A DNV EL+KEL K+Q+R   +LPQ  ++ I  + + V+ ED+SF  +GVA+GDTI+I  G V
Subjt:  VKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFI--YDRDVMDEDRSFRWHGVAHGDTIEIFNGSV

AT4G03360.1 Ubiquitin family protein9.7e-1830.43Show/hide
Query:  VIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDH---------NNSSSNNNN------NN
        VI E   G  FTI+V F+DTVL IK KI+     P+ KQ LIF   VLQD  ++  C+I  NSRI L ++P D+         N S S  +N      NN
Subjt:  VIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDH---------NNSSSNNNN------NN

Query:  NNN-------------------------------------------------------AAGS-----------------------------SKKLKVMVK
         ++                                                       A GS                             + K+ VMV+
Subjt:  NNN-------------------------------------------------------AAGS-----------------------------SKKLKVMVK

Query:  PKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFI--YDRDVMDEDRSFRWHGVAHGDTIEIFNGSV
        P   ++ I +EV A DNV EL+KEL K+Q+R   +LPQ  ++ I  + + V+ ED+SF  +GVA+GDTI+I  G V
Subjt:  PKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFI--YDRDVMDEDRSFRWHGVAHGDTIEIFNGSV

AT4G03370.1 Ubiquitin family protein7.9e-2028.93Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDH------------------------
        M +  E   G  F+I++G  DTVL  K KI+   RIP+ +QT+ F G +L+D  D+   +ILQN  + L ++P D+                        
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDH------------------------

Query:  --------------------------NNSSSN-----------------------------NNNNNNNNAAGSSK-----------------------KL
                                   N S N                             N +    N   SS                        K+
Subjt:  --------------------------NNSSSN-----------------------------NNNNNNNNAAGSSK-----------------------KL

Query:  KVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVT
         VMV+P   +++I +EVN   NV  L+KEL K+Q+R   +LP EGFFFI+ +DV+ ED+SF  + VA GDTIEIF G VT
Subjt:  KVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVT

AT4G05230.1 Ubiquitin-like superfamily protein3.8e-5454.76Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNS------------------SSN
        MDV FE   G  F IE+G++DTVLEIK+KI+KY RIP+ KQTL+F G+VLQD  D+E C IL +SRI+L ++  D + +                  +SN
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNS------------------SSN

Query:  -----------NNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIE
                   +NNNNNNN     KKL+VMV PK G++KIP++VNA DNVGEL+KEL K+QQR    LPQEG+FFIY ++VMDE+RSFRWH V  GDTIE
Subjt:  -----------NNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIE

Query:  IFNGSVTGGS
        IFNGSV+GGS
Subjt:  IFNGSVTGGS

AT4G05260.1 Ubiquitin-like superfamily protein1.2e-2030.86Show/hide
Query:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSS-------------------
        MDV FE   GR F IE+G++DTVLEIK+KI+KY RIP+P QTL F G+ L+D  D+  C+ILQNS + L V P  ++N+                     
Subjt:  MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSS-------------------

Query:  -----------------NNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVN----ASDNVGE-------------------------------------
                          ++   NN+ +  S   K ++K   G Q  P+  N     SD+V E                                     
Subjt:  -----------------NNNNNNNNNAAGSSKKLKVMVKPKCGSQKIPMEVN----ASDNVGE-------------------------------------

Query:  ------LKKELQKLQQRLHFHLPQEG-FFFIYDRDVMDEDRSFRWHGVAHGDTIEI
              L++EL + + R H   PQ+G +FF++   V++ED+SF W+ VAH D +EI
Subjt:  ------LKKELQKLQQRLHFHLPQEG-FFFIYDRDVMDEDRSFRWHGVAHGDTIEI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGATCTTCGAGCCAACGAAAGGAAGAGGGTTCACGATCGAAGTGGGTTTCTTCGACACCGTTTTGGAGATCAAAGAGAAGATTCAGAAATACCACCGC
ATCCCCATCCCCAAACAAACCCTAATCTTTAATGGCCACGTCCTTCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAAAACTCCCGCATCAAACTCATC
GTTGCGCCATCCGATCACAACAACAGCAGCAGCAACAATAATAACAATAATAATAATAATGCTGCCGGGTCGTCGAAGAAGTTGAAAGTGATGGTGAAGCCGAAA
TGTGGGTCACAGAAGATACCGATGGAAGTGAACGCGTCTGACAACGTGGGGGAGCTGAAGAAGGAGCTGCAGAAGCTGCAGCAGAGACTCCATTTTCATCTCCCA
CAAGAGGGCTTCTTCTTCATTTACGACCGTGACGTCATGGACGAGGACCGCTCCTTCCGCTGGCATGGCGTCGCCCACGGCGACACCATCGAGATCTTCAATGGC
AGTGTTACCGGCGGATCT
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGATCTTCGAGCCAACGAAAGGAAGAGGGTTCACGATCGAAGTGGGTTTCTTCGACACCGTTTTGGAGATCAAAGAGAAGATTCAGAAATACCACCGC
ATCCCCATCCCCAAACAAACCCTAATCTTTAATGGCCACGTCCTTCAAGACGACCGCGACGTCGAATTCTGCGAAATCCTCCAAAACTCCCGCATCAAACTCATC
GTTGCGCCATCCGATCACAACAACAGCAGCAGCAACAATAATAACAATAATAATAATAATGCTGCCGGGTCGTCGAAGAAGTTGAAAGTGATGGTGAAGCCGAAA
TGTGGGTCACAGAAGATACCGATGGAAGTGAACGCGTCTGACAACGTGGGGGAGCTGAAGAAGGAGCTGCAGAAGCTGCAGCAGAGACTCCATTTTCATCTCCCA
CAAGAGGGCTTCTTCTTCATTTACGACCGTGACGTCATGGACGAGGACCGCTCCTTCCGCTGGCATGGCGTCGCCCACGGCGACACCATCGAGATCTTCAATGGC
AGTGTTACCGGCGGATCT
Protein sequenceShow/hide protein sequence
MDVIFEPTKGRGFTIEVGFFDTVLEIKEKIQKYHRIPIPKQTLIFNGHVLQDDRDVEFCEILQNSRIKLIVAPSDHNNSSSNNNNNNNNNAAGSSKKLKVMVKPK
CGSQKIPMEVNASDNVGELKKELQKLQQRLHFHLPQEGFFFIYDRDVMDEDRSFRWHGVAHGDTIEIFNGSVTGGS