; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1402 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1402
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRNA polymerase II transcription factor B subunit 2
Genome locationMC01:18651155..18659432
RNA-Seq ExpressionMC01g1402
SyntenyMC01g1402
Gene Ontology termsGO:0006289 - nucleotide-excision repair (biological process)
GO:0070816 - phosphorylation of RNA polymerase II C-terminal domain (biological process)
GO:0000439 - transcription factor TFIIH core complex (cellular component)
GO:0005675 - transcription factor TFIIH holo complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0001671 - ATPase activator activity (molecular function)
GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domainsIPR004598 - Transcription factor TFIIH subunit p52/Tfb2
IPR040662 - Transcription factor Tfb2, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134713.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Cucumis sativus]1.36e-31496.01Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+ PV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_022142125.1 RNA polymerase II transcription factor B subunit 2 [Momordica charantia]3.13e-31591.45Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFL
        LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFL
Subjt:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_022977542.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita maxima]2.55e-31495.79Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_023543805.1 RNA polymerase II transcription factor B subunit 2 [Cucurbita pepo subsp. pepo]3.01e-31395.57Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

XP_038882460.1 general transcription and DNA repair factor IIH subunit TFB2 isoform X1 [Benincasa hispida]3.75e-31496.01Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLP MKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNP FQANLQKLLI+GEVLAREPMP+NITVRLPSLE+L+AYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLT+EQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWED KNMRLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

TrEMBL top hitse value%identityAlignment
A0A0A0KK55 RNA polymerase II transcription factor B subunit 26.60e-31596.01Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+ PV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWFIPTKLATNLSMSLADSSSRK GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYS+S+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSKN+RLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

A0A5A7UBE2 RNA polymerase II transcription factor B subunit 22.69e-29591.48Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV+AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQR------------------
        RLNPTFQANLQKLLI+GEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQR                  
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQR------------------

Query:  -------DKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF
               DKEAPRLTESGFQFLLMETNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTL++EQRYAIKDLADLGLVKLQQGRK+SWF
Subjt:  -------DKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWF

Query:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSV
        IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFLQQNAHPRVAERIPSV
Subjt:  IPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSV

Query:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL
        PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKN+RL
Subjt:  PENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRL

A0A6J1CK16 RNA polymerase II transcription factor B subunit 21.51e-31591.45Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD
        TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE                                        AYDIDTLTEEQRYAIKDLAD
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGE----------------------------------------AYDIDTLTEEQRYAIKDLAD

Query:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFL
        LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQ +TFL
Subjt:  LGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFL

Query:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
Subjt:  QQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

A0A6J1EGA7 RNA polymerase II transcription factor B subunit 24.88e-31295.34Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LY NAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EER VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

A0A6J1IIT5 RNA polymerase II transcription factor B subunit 21.24e-31495.79Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPAMKLD LYENAFICEAILRSLPPLAKKFVLQMLYI+APV AKSMEEWVL DGVSKYKVA+DRLIQLRVFIETADRKRETTY
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
        +LNPTFQANLQKLLI+GEVLAREPMPSNITVRLP+LE+LEAYALDQWECFLLQLINSGQA+KPSNISSSVMKVFQKGLLSQRDKE PRLTESGFQFLLME
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYISN+EERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        VETNFRMYAYSSS+LHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITA+Q +TFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
        YDEFPSREVFEAACDYAREWNGLLWEDSK +RLVVKAD+HTHMREHLRRQK
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

SwissProt top hitse value%identityAlignment
O70422 General transcription factor IIH subunit 48.5e-6834Show/hide
Query:  KNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQA
        +N  + +  L    LD LY +   C A+ R LP LAK +V++ML++E P+   ++  WV  +     + +   L  LR++             LNP F+ 
Subjt:  KNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQA

Query:  NLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW
        NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++T AQLW
Subjt:  NLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLMETNAQLW

Query:  YIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN
        Y + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF+VVETN
Subjt:  YIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGFVVVETN

Query:  FRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF
        +R+YAY+ S L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q I FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T    Y++F
Subjt:  FRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEF

Query:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
         S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  PSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

P60027 General transcription factor IIH subunit 43.8e-6833.77Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD LY +   C A+ R LP LAK +V++ML++E P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q I FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

Q54C29 General transcription factor IIH subunit 45.3e-6231.04Show/hide
Query:  VASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFI-------------------------
        +ASL +  L+ LY++ + C+AILRSLPP +K+++L+ML ++        ++W     + ++K +L +L  L++                           
Subjt:  VASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFI-------------------------

Query:  --ETADRKRETTYRLNPTFQANLQKLLI-YGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEA
          +   ++ E T RLNP FQ N+++ L+   +V+           + PS++DL++Y+  QWE  L  L  S    +PS + S ++       L++++ + 
Subjt:  --ETADRKRETTYRLNPTFQANLQKLLI-YGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEA

Query:  PRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS--WFIPTK-
          +T  GF+FLL +   Q+W ++  Y+ + E++         DL+SFL  LSF   G  Y +  L+E+Q+  +  L   GL+ +   R DS   F PT+ 
Subjt:  PRLTESGFQFLLMETNAQLWYIIREYISNSEER----GVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDS--WFIPTK-

Query:  ---LATNLSMSLADSSS-------RKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVA
           L T  ++SL  S S       ++QG++V+ETN+R+YAY+SS L   +L LF ++ Y+LPNL VG IT+ES+  A  +GITA+Q I F++ N+HP  A
Subjt:  ---LATNLSMSLADSSS-------RKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVA

Query:  ERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRR
             +P+ V +QI LWE++ NR+  T +  Y+ FP+ + + A   +A+E +  +W       LVVK + +  +R  +++
Subjt:  ERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRR

Q680U9 General transcription and DNA repair factor IIH subunit TFB24.6e-20778.44Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ

Q92759 General transcription factor IIH subunit 43.8e-6833.77Show/hide
Query:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL
        +V +  +N  + +  L    LD LY +   C A+ R LP LAK +V++ML++E P+   ++  WV  +     + +   L  LR++             L
Subjt:  QVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRL

Query:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME
        NP F+ NL+  LL  G+  + +            +  L+ YA ++WE  L  ++ S  A    +++  +    Q GL+ S    E P +T +GFQFLL++
Subjt:  NPTFQANLQ-KLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLL-SQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF
        T AQLWY + +Y+  ++ RG+D  +++SFL +LSF   G+ Y ++ +++     ++ L + GLV  Q+ RK   + PT+LA NLS  +S A  +  + GF
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLS--MSLADSSSRKQGF

Query:  VVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA
        +VVETN+R+YAY+ S L   ++ LFS + Y+ PN++V  +T+ES+  A  +GITA+Q I FL+  AHP + ++ P +P  +TDQIRLWE + +R+  T  
Subjt:  VVVETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPA

Query:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK
          Y++F S+  FE    +ARE   L++E+S    +VV    H+ ++   +RQK
Subjt:  HFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQK

Arabidopsis top hitse value%identityAlignment
AT4G17020.1 transcription factor-related3.3e-20878.44Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ

AT4G17020.2 transcription factor-related3.3e-20878.44Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ

AT4G17020.3 transcription factor-related3.3e-20878.44Show/hide
Query:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY
        MPQVKIIAKNFMDMVASLPA+KLD LY N FICEAILRSLPPLAKK+VLQMLYI+ PV A  MEEWVL+DG SK++VA+DRLIQLR+F E +DRKR T+Y
Subjt:  MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTY

Query:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME
         LNPTFQ NLQK +I G VL REPM S+  ++LPSL++LE YAL QWECFLLQLINSGQ EK + ISSS+MK+FQ+GLLSQRDK+ PRLTESGFQFLLM+
Subjt:  RLNPTFQANLQKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLME

Query:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV
        TNAQLWYIIREYI N+EER VDPADLISFLLELSFHVTG+AY+++TLTE Q   +KDLADLGLVKLQQGRKDSWFIPTKLATNLS+SLADSS+RK+GFVV
Subjt:  TNAQLWYIIREYISNSEERGVDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVV

Query:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF
        +ETNFRMYAYS+S+L CEILRLF+RIEYQLPNLI  AITKESLYNAF NGIT++Q ITFLQQN+HPR A+R+PS+PENVTDQIRLWE+DL R+++T AHF
Subjt:  VETNFRMYAYSSSRLHCEILRLFSRIEYQLPNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHF

Query:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ
        YDEFPS++VFEAACD+AREW GLLWEDSK MRLVVK++VH  MRE L  Q
Subjt:  YDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVHTHMREHLRRQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCAAGTAAAGATCATAGCGAAGAATTTCATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAATCTCTATGAGAATGCATTTATCTGCGAAGCCATTCT
CAGGTCACTTCCACCTCTAGCCAAGAAGTTCGTTTTACAAATGTTATACATTGAAGCTCCAGTAGCAGCCAAGTCCATGGAGGAGTGGGTGCTTTCAGATGGAGTCTCAA
AGTATAAGGTTGCCCTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAATCCAACATTCCAAGCAAACCTC
CAAAAGCTTTTAATATATGGTGAAGTTCTAGCCAGGGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTGAGGCTTATGCTCTTGATCAATG
GGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCATCAAATATCAGTTCTTCTGTGATGAAAGTTTTCCAGAAAGGCCTTCTAAGTCAGAGGGATA
AAGAAGCTCCACGACTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATATATCTAACTCTGAGGAGCGAGGT
GTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATCGATACACTAACAGAAGAACAGAGGTATGCAATCAAGGA
TCTTGCTGATCTGGGACTTGTTAAACTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCTACAAATCTTTCAATGAGTTTGGCAGATTCTTCTTCAA
GGAAACAAGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAGACTACATTGTGAAATATTACGTCTTTTTTCAAGGATTGAGTATCAACTT
CCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAACGGAATTACGGCAGAGCAGGCAATTACTTTTCTGCAGCAGAATGCACATCCTCG
TGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGCTATGGGAATCAGATCTTAATAGGGTCGATATTACTCCCGCACATTTTTACGACGAAT
TCCCTTCCAGGGAAGTTTTCGAGGCTGCTTGTGACTACGCCCGAGAATGGAACGGGTTGCTATGGGAGGACTCGAAAAACATGCGGCTCGTAGTGAAGGCGGACGTACAC
ACACATATGCGGGAACATCTTCGTCGTCAAAAATAG
mRNA sequenceShow/hide mRNA sequence
GAACAATTGGATATTGGACGACGTGTCGTTCTTCGACTTGGGTCTTCTTCTTAGAGAACGATATCGGCTACATTGGTTCTTTGGGGTTCGTCGGACTGGGACCAAGCAGA
GAGTCAATCGACAATCATCAAACTAGATGAGCTGCTGTAATTCATTGTTTGTATTCGGAGGTTCTGAGACTACACCGTTGGCTATAATTTCTCATTGCAGTCTCACTGAA
GAACTGGAAGCTCCGATTGTGTGCAATTCTTAAAAATTCAGTGTGTCGAACACTTCTGGGATCCTCCTCTGCTTGCTCAAAGGTGTGCGGAACCCGAAGGAAGGAAAGAA
GAGAAGGAGAGCATAATTCAGAATGCCTCAAGTAAAGATCATAGCGAAGAATTTCATGGACATGGTGGCCTCCTTGCCCGCCATGAAGCTCGACAATCTCTATGAGAATG
CATTTATCTGCGAAGCCATTCTCAGGTCACTTCCACCTCTAGCCAAGAAGTTCGTTTTACAAATGTTATACATTGAAGCTCCAGTAGCAGCCAAGTCCATGGAGGAGTGG
GTGCTTTCAGATGGAGTCTCAAAGTATAAGGTTGCCCTTGATCGATTGATTCAATTGAGAGTATTTATTGAGACTGCGGATAGGAAAAGAGAAACAACCTACAGGCTAAA
TCCAACATTCCAAGCAAACCTCCAAAAGCTTTTAATATATGGTGAAGTTCTAGCCAGGGAACCAATGCCTTCAAATATAACCGTGAGGCTTCCAAGTTTGGAAGATCTTG
AGGCTTATGCTCTTGATCAATGGGAGTGCTTCTTGCTGCAATTGATAAACTCAGGCCAAGCAGAGAAGCCATCAAATATCAGTTCTTCTGTGATGAAAGTTTTCCAGAAA
GGCCTTCTAAGTCAGAGGGATAAAGAAGCTCCACGACTAACTGAGAGTGGTTTCCAGTTCTTGTTGATGGAAACAAATGCACAACTTTGGTATATCATCAGAGAATATAT
ATCTAACTCTGAGGAGCGAGGTGTGGATCCTGCAGATTTGATTTCTTTTCTGCTAGAGCTTAGTTTTCATGTGACAGGAGAGGCTTATGATATCGATACACTAACAGAAG
AACAGAGGTATGCAATCAAGGATCTTGCTGATCTGGGACTTGTTAAACTTCAGCAGGGTAGAAAAGACAGTTGGTTCATACCTACTAAATTAGCTACAAATCTTTCAATG
AGTTTGGCAGATTCTTCTTCAAGGAAACAAGGATTTGTTGTCGTGGAGACAAATTTCAGGATGTATGCTTATTCTTCTTCCAGACTACATTGTGAAATATTACGTCTTTT
TTCAAGGATTGAGTATCAACTTCCAAATCTTATAGTTGGAGCAATAACGAAAGAAAGCTTGTATAATGCTTTTAAGAACGGAATTACGGCAGAGCAGGCAATTACTTTTC
TGCAGCAGAATGCACATCCTCGTGTTGCAGAGAGAATACCATCAGTCCCTGAAAATGTCACGGATCAGATTAGGCTATGGGAATCAGATCTTAATAGGGTCGATATTACT
CCCGCACATTTTTACGACGAATTCCCTTCCAGGGAAGTTTTCGAGGCTGCTTGTGACTACGCCCGAGAATGGAACGGGTTGCTATGGGAGGACTCGAAAAACATGCGGCT
CGTAGTGAAGGCGGACGTACACACACATATGCGGGAACATCTTCGTCGTCAAAAATAGATGATATATAAATGCTGCAAGATCTGCATATAACCATGGCCTCTGGAACTTC
AGTTTTTGTTGCTTAAAGTGGGCATGGGCTAAAAGATCTACTTCATATATGGGAATGGTGAAGAACGCAGTGTGAGAATTGTTGTATGGGAGAGAAGAAAATTGTGCCAT
TGAGTTCATTAGTGTACGTTTTTCCAAAGTCAATTTTCCTCTCTACCATGTGGAAGTTTGGTTAGGTTGATTTCCCTTCATTGGGACAACTTTTGGAAAAGAAAAAAATA
TATATATTCAATGAGGTGGCAGAAAAATTATCCAATGCCTCTAGCAACCATTCGATATAGGTTTAAAATACCATTTCTAAAATTTTTCCTTCTACATCAATCACATTGTT
CTAAC
Protein sequenceShow/hide protein sequence
MPQVKIIAKNFMDMVASLPAMKLDNLYENAFICEAILRSLPPLAKKFVLQMLYIEAPVAAKSMEEWVLSDGVSKYKVALDRLIQLRVFIETADRKRETTYRLNPTFQANL
QKLLIYGEVLAREPMPSNITVRLPSLEDLEAYALDQWECFLLQLINSGQAEKPSNISSSVMKVFQKGLLSQRDKEAPRLTESGFQFLLMETNAQLWYIIREYISNSEERG
VDPADLISFLLELSFHVTGEAYDIDTLTEEQRYAIKDLADLGLVKLQQGRKDSWFIPTKLATNLSMSLADSSSRKQGFVVVETNFRMYAYSSSRLHCEILRLFSRIEYQL
PNLIVGAITKESLYNAFKNGITAEQAITFLQQNAHPRVAERIPSVPENVTDQIRLWESDLNRVDITPAHFYDEFPSREVFEAACDYAREWNGLLWEDSKNMRLVVKADVH
THMREHLRRQK