; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1410 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1410
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationMC01:18718494..18719180
RNA-Seq ExpressionMC01g1410
SyntenyMC01g1410
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134706.1 E3 ubiquitin-protein ligase RMA1H1 isoform X1 [Cucumis sativus]3.68e-14587.61Show/hide
Query:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA
        GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEVEPE KA+H DI+IPPRPSA
Subjt:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ
        CGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEEDS A+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLRRQ
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ

Query:  EMQASKSLNRISIFLLCCVILCVLVF
        EMQ  KSLNRISIFL CCVILCVLVF
Subjt:  EMQASKSLNRISIFLLCCVILCVLVF

XP_004134707.1 E3 ubiquitin-protein ligase RMA1H1 isoform X2 [Cucumis sativus]1.86e-14587.61Show/hide
Query:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA
        GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEVEPE KA+H DI+IPPRPSA
Subjt:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ
        CGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEEDS A+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLRRQ
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ

Query:  EMQASKSLNRISIFLLCCVILCVLVF
        EMQ  KSLNRISIFL CCVILCVLVF
Subjt:  EMQASKSLNRISIFLLCCVILCVLVF

XP_008439861.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]7.57e-14588.05Show/hide
Query:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA
        GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEVE EAKA+HRDI+IPPRPSA
Subjt:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ
        CGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEE S A+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLRRQ
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ

Query:  EMQASKSLNRISIFLLCCVILCVLVF
        EMQ  KSLNRISIFL CCVILCVLVF
Subjt:  EMQASKSLNRISIFLLCCVILCVLVF

XP_022142014.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia]1.44e-171100Show/hide
Query:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
        STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
Subjt:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR

Query:  PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL
        PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL
Subjt:  PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL

Query:  RRQEMQASKSLNRISIFLLCCVILCVLVF
        RRQEMQASKSLNRISIFLLCCVILCVLVF
Subjt:  RRQEMQASKSLNRISIFLLCCVILCVLVF

XP_038881993.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]4.55e-14989.04Show/hide
Query:  TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRP
        TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEVEPEAKA+H DI+IPPRP
Subjt:  TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRP

Query:  SACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLR
        SACGN MLATPSI   QQQLPYRNPYQ+PNHDPLLF NYEEDS AAPLLNLARTSFS FHHP+VGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLR
Subjt:  SACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLR

Query:  RQEMQASKSLNRISIFLLCCVILCVLVF
        RQEMQ  KSLNRISIFL CCVILCVLVF
Subjt:  RQEMQASKSLNRISIFLLCCVILCVLVF

TrEMBL top hitse value%identityAlignment
A0A0A0KK60 Rnf59.00e-14687.61Show/hide
Query:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA
        GT+RENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ+AEEVEPE KA+H DI+IPPRPSA
Subjt:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ
        CGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEEDS A+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLRRQ
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ

Query:  EMQASKSLNRISIFLLCCVILCVLVF
        EMQ  KSLNRISIFL CCVILCVLVF
Subjt:  EMQASKSLNRISIFLLCCVILCVLVF

A0A1S3AZB8 E3 ubiquitin-protein ligase RMA1H1-like3.66e-14588.05Show/hide
Query:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA
        GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEVE EAKA+HRDI+IPPRPSA
Subjt:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ
        CGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEE S A+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLRRQ
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ

Query:  EMQASKSLNRISIFLLCCVILCVLVF
        EMQ  KSLNRISIFL CCVILCVLVF
Subjt:  EMQASKSLNRISIFLLCCVILCVLVF

A0A5A7UGP7 E3 ubiquitin-protein ligase RMA1H1-like3.66e-14588.05Show/hide
Query:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA
        GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEVE EAKA+HRDI+IPPRPSA
Subjt:  GTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ
        CGN +LATPS    QQQLPYRNPYQRPNHDPLLF+NYEE S A+PLLNLARTSFS+FHHPVVGMIGD ++ RVFGNS+NLYSYRNSY +TGSS NRLRRQ
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQ

Query:  EMQASKSLNRISIFLLCCVILCVLVF
        EMQ  KSLNRISIFL CCVILCVLVF
Subjt:  EMQASKSLNRISIFLLCCVILCVLVF

A0A6J1CKD0 E3 ubiquitin-protein ligase RMA1H1-like6.98e-172100Show/hide
Query:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
        STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
Subjt:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR

Query:  PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL
        PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL
Subjt:  PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL

Query:  RRQEMQASKSLNRISIFLLCCVILCVLVF
        RRQEMQASKSLNRISIFLLCCVILCVLVF
Subjt:  RRQEMQASKSLNRISIFLLCCVILCVLVF

A0A6J1KVR4 E3 ubiquitin-protein ligase RMA1H1-like isoform X11.92e-14185.15Show/hide
Query:  TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRD-IDIPPR
        TGGTDRE YKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHV+S SLA DEHPQCPVCKADISHTTMVPLYGRGQ AEEV PEA+A+H+D +DIPPR
Subjt:  TGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRD-IDIPPR

Query:  PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL
        PSACGN +LAT  +   QQQL YRNPYQRPNHDPLLF NYEEDS A P LNLARTSFS FHHPVVGMIGD MY RVFGNS+NLYSY+NSYH+TGS  NRL
Subjt:  PSACGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRL

Query:  RRQEMQASKSLNRISIFLLCCVILCVLVF
        RRQEMQA KSLNRISIFL CCVILCVLVF
Subjt:  RRQEMQASKSLNRISIFLLCCVILCVLVF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA19.4e-3941.1Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQS S + +   H QCPVCK+ +SH+T+VPLYGRG+   + E +         +P RP          
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT

Query:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS
        P    +    PY +   R +      S  E     + +++    S+S    PV+ M+G+++ TR+FG    + ++Y ++Y++ G+S  R+RR+ MQA KS
Subjt:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS

Query:  LNRISIFLLCCVILCVLVF
        L RI  F +CCV+LC+L+F
Subjt:  LNRISIFLLCCVILCVLVF

P93030 E3 ubiquitin-protein ligase RMA25.7e-2834.21Show/hide
Query:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC
        G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S           E P+CPVCK+D+S  T+VP+YGRGQ         KA     ++P RP+  
Subjt:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC

Query:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR
           +        + + Q+  YR P                                    PV+G++ +++Y R+FG +S N+  YR+        + R R
Subjt:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR

Query:  RQEMQASKSLNRISIFLLCCVILCVLVF
        R+ MQA +SL+R+ +FLLC + +C+ +F
Subjt:  RQEMQASKSLNRISIFLLCCVILCVLVF

Q5ZIR9 E3 ubiquitin-protein ligase RNF1852.8e-1943.56Show/hide
Query:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
        S G  D  N    F+CNICLD A + V++LCGHL+CWPC+++WL  +           CPVCKA IS   ++PLYGRG + ++ +P  K        PPR
Subjt:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR

Query:  P
        P
Subjt:  P

Q6R567 E3 ubiquitin-protein ligase RMA1H11.7e-4846.26Show/hide
Query:  ENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL--ATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA--
        EN  G FDCNICLD  HEPV+TLCGHLYCWPCIYKW++ QS S   +  + PQCPVCKA++S  T++PLYGRG  + +   E KA +  I IP RP +  
Subjt:  ENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL--ATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSA--

Query:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSE-NLYSYRNSYHVTGSSSNRLRR
        CG H L  P+ D    QL  R  YQ+ +        Y+    ++P+L+    + +   H    MIG++ Y R+FGNS   +Y+Y NSY++  SSS R+RR
Subjt:  CGNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSE-NLYSYRNSYHVTGSSSNRLRR

Query:  QEMQASKSLNRISIFLLCCVILCVLVF
        Q  QA +SL RI  FL CC + C+++F
Subjt:  QEMQASKSLNRISIFLLCCVILCVLVF

Q8GUK7 E3 ubiquitin-protein ligase RMA32.7e-4645.33Show/hide
Query:  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AIHRDIDIPPRPSAC
        N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHVQ +S++ D+H   CPVCK++I+ T++VPLYGRG S+      +K   A+  DI   P PSA 
Subjt:  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AIHRDIDIPPRPSAC

Query:  GNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQE
         N + +  S++   Q       +    + P  F+  E         +LA     +F +PV+GM GDL+YTR+FG   N  +           S R+    
Subjt:  GNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQE

Query:  MQASKSLNRISIFLLCCVILCVLVF
        MQ  KSLNR+SIF LCC+ILC+L+F
Subjt:  MQASKSLNRISIFLLCCVILCVLVF

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein5.5e-2646.55Show/hide
Query:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR
        S+G     N    F+CNICLD A +P+VTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VPLYGRG+S+   +P +K+I   +++P R
Subjt:  STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPR

Query:  PSACGNHMLATPSIDH
        PS         P  +H
Subjt:  PSACGNHMLATPSIDH

AT4G03510.1 RING membrane-anchor 16.7e-4041.1Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQS S + +   H QCPVCK+ +SH+T+VPLYGRG+   + E +         +P RP          
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT

Query:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS
        P    +    PY +   R +      S  E     + +++    S+S    PV+ M+G+++ TR+FG    + ++Y ++Y++ G+S  R+RR+ MQA KS
Subjt:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS

Query:  LNRISIFLLCCVILCVLVF
        L RI  F +CCV+LC+L+F
Subjt:  LNRISIFLLCCVILCVLVF

AT4G03510.2 RING membrane-anchor 16.7e-4041.1Show/hide
Query:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT
        FDCNICLD   EPVVTLCGHL+CWPCI+KWL VQS S + +   H QCPVCK+ +SH+T+VPLYGRG+   + E +         +P RP          
Subjt:  FDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATD--EHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLAT

Query:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS
        P    +    PY +   R +      S  E     + +++    S+S    PV+ M+G+++ TR+FG    + ++Y ++Y++ G+S  R+RR+ MQA KS
Subjt:  PSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNS-ENLYSYRNSYHVTGSSSNRLRRQEMQASKS

Query:  LNRISIFLLCCVILCVLVF
        L RI  F +CCV+LC+L+F
Subjt:  LNRISIFLLCCVILCVLVF

AT4G27470.1 RING membrane-anchor 31.9e-4745.33Show/hide
Query:  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AIHRDIDIPPRPSAC
        N  GCFDCNICLD AH+PVVTLCGHL+CWPCIYKWLHVQ +S++ D+H   CPVCK++I+ T++VPLYGRG S+      +K   A+  DI   P PSA 
Subjt:  NYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHP-QCPVCKADISHTTMVPLYGRGQSAEEVEPEAK---AIHRDIDIPPRPSAC

Query:  GNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQE
         N + +  S++   Q       +    + P  F+  E         +LA     +F +PV+GM GDL+YTR+FG   N  +           S R+    
Subjt:  GNHMLATPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQE

Query:  MQASKSLNRISIFLLCCVILCVLVF
        MQ  KSLNR+SIF LCC+ILC+L+F
Subjt:  MQASKSLNRISIFLLCCVILCVLVF

AT4G28270.1 RING membrane-anchor 24.0e-2934.21Show/hide
Query:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC
        G FDCNICLD   +PVVTLCGHL+CWPCI+KW +  + S           E P+CPVCK+D+S  T+VP+YGRGQ         KA     ++P RP+  
Subjt:  GCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA-------TDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSAC

Query:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR
           +        + + Q+  YR P                                    PV+G++ +++Y R+FG +S N+  YR+        + R R
Subjt:  GNHMLATPSI--DHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFG-NSENLYSYRNSYHVTGSSSNRLR

Query:  RQEMQASKSLNRISIFLLCCVILCVLVF
        R+ MQA +SL+R+ +FLLC + +C+ +F
Subjt:  RQEMQASKSLNRISIFLLCCVILCVLVF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTACAGGGGGAACAGATCGAGAAAACTACAAAGGTTGCTTTGATTGTAACATATGCTTAGACTTTGCCCATGAGCCAGTGGTCACTCTGTGCGGCCACTTGTACTGCTG
GCCTTGCATCTATAAATGGCTCCACGTCCAGAGTGCCTCTCTTGCCACTGATGAGCACCCGCAATGCCCTGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTC
TCTACGGCCGTGGCCAATCTGCCGAGGAAGTCGAGCCGGAGGCCAAAGCAATCCATCGAGACATTGATATACCTCCAAGACCATCAGCTTGTGGTAACCATATGCTTGCT
ACTCCCAGCATAGACCACCAACAGCAGCAGCTTCCATATCGAAATCCTTACCAGCGACCAAACCATGACCCTCTTCTTTTCAGCAATTATGAAGAAGACTCATCAGCAGC
TCCATTGCTGAACCTTGCAAGAACTTCATTTAGCAATTTTCACCATCCAGTGGTCGGGATGATCGGCGACTTGATGTATACGAGGGTGTTCGGGAACTCGGAAAACTTGT
ATTCTTATCGAAACTCTTACCATGTAACAGGGAGCAGCAGTAACCGGTTGAGAAGACAGGAAATGCAGGCATCCAAGTCATTGAACAGAATCTCCATATTCCTCCTCTGC
TGTGTCATTCTGTGTGTTCTCGTCTTC
mRNA sequenceShow/hide mRNA sequence
AGTACAGGGGGAACAGATCGAGAAAACTACAAAGGTTGCTTTGATTGTAACATATGCTTAGACTTTGCCCATGAGCCAGTGGTCACTCTGTGCGGCCACTTGTACTGCTG
GCCTTGCATCTATAAATGGCTCCACGTCCAGAGTGCCTCTCTTGCCACTGATGAGCACCCGCAATGCCCTGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTC
TCTACGGCCGTGGCCAATCTGCCGAGGAAGTCGAGCCGGAGGCCAAAGCAATCCATCGAGACATTGATATACCTCCAAGACCATCAGCTTGTGGTAACCATATGCTTGCT
ACTCCCAGCATAGACCACCAACAGCAGCAGCTTCCATATCGAAATCCTTACCAGCGACCAAACCATGACCCTCTTCTTTTCAGCAATTATGAAGAAGACTCATCAGCAGC
TCCATTGCTGAACCTTGCAAGAACTTCATTTAGCAATTTTCACCATCCAGTGGTCGGGATGATCGGCGACTTGATGTATACGAGGGTGTTCGGGAACTCGGAAAACTTGT
ATTCTTATCGAAACTCTTACCATGTAACAGGGAGCAGCAGTAACCGGTTGAGAAGACAGGAAATGCAGGCATCCAAGTCATTGAACAGAATCTCCATATTCCTCCTCTGC
TGTGTCATTCTGTGTGTTCTCGTCTTC
Protein sequenceShow/hide protein sequence
STGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLATDEHPQCPVCKADISHTTMVPLYGRGQSAEEVEPEAKAIHRDIDIPPRPSACGNHMLA
TPSIDHQQQQLPYRNPYQRPNHDPLLFSNYEEDSSAAPLLNLARTSFSNFHHPVVGMIGDLMYTRVFGNSENLYSYRNSYHVTGSSSNRLRRQEMQASKSLNRISIFLLC
CVILCVLVF