; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1528 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1528
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionDNA-binding protein DDB_G0278111
Genome locationMC01:19555103..19559414
RNA-Seq ExpressionMC01g1528
SyntenyMC01g1528
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR002836 - PDCD5-like
IPR036883 - PDCD5-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439666.1 PREDICTED: DNA-binding protein DDB_G0278111 [Cucumis melo]7.61e-7196.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNN EQQKAQE+ARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022142304.1 DNA-binding protein DDB_G0278111 isoform X1 [Momordica charantia]5.58e-7399.22Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELM+QRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022925642.1 DNA-binding protein DDB_G0278111-like isoform X2 [Cucurbita moschata]1.54e-7096.09Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNN EQQKAQE+A+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_022926831.1 DNA-binding protein DDB_G0278111-like [Cucurbita moschata]2.18e-7096.09Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+N EQQKAQE+A+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

XP_038881892.1 DNA-binding protein DDB_G0278111 [Benincasa hispida]4.59e-7298.44Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQNN EQQKAQE+ARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

TrEMBL top hitse value%identityAlignment
A0A1S3AZB0 DNA-binding protein DDB_G02781113.68e-7196.88Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M+DPELEAIRQRRMQELMAQRGMGSQNN EQQKAQE+ARSEAEERRQMMLSQILSMQARERL+RIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1CKK4 DNA-binding protein DDB_G0278111 isoform X12.70e-7399.22Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELM+QRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1EC84 DNA-binding protein DDB_G0278111-like isoform X27.43e-7196.09Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNN EQQKAQE+A+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1IVC3 DNA-binding protein DDB_G0278111-like isoform X27.43e-7196.09Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRG+GSQNN EQQKAQE+A+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVL+DDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

A0A6J1KTQ8 DNA-binding protein DDB_G0278111-like1.06e-7096.09Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        MDDPELEAIRQRRMQELMAQRGMGSQ+N EQQKAQE+A+SEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE+LIT
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        LLEQINNQTTKQTKVTIQRRRSVLEDDD
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

SwissProt top hitse value%identityAlignment
O13929 Uncharacterized protein C23C4.09c3.1e-1544.09Show/hide
Query:  DPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLL
        D EL+AIRQ R+ +L A+ G    N +    + +  +   +E RQ +LSQIL   AR+RL RIALV+ ++A  VE+++LR A+ GQI  K+SE  LI LL
Subjt:  DPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLL

Query:  EQINNQTTK--QTKVTIQRRRSVLEDD
        E+I+ + +K  +TK+ I RR    EDD
Subjt:  EQINNQTTK--QTKVTIQRRRSVLEDD

O14737 Programmed cell death protein 54.0e-1541.41Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ++A+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

P56812 Programmed cell death protein 54.0e-1541.41Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ++A+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+  KVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +LE+++ QT K+T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Q54YS0 DNA-binding protein DDB_G02781111.9e-1751.75Show/hide
Query:  QELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK
        Q+L   +G G   + E Q+ QE  R EA ERRQ +L QIL+  ARERL+RI +VKPEK+R +ED+I+RAAQ GQ+ E+V + +LI+LLEQ+ ++ TK+T 
Subjt:  QELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTK

Query:  VTIQRRRSVLEDDD
        +T++RR   +EDDD
Subjt:  VTIQRRRSVLEDDD

Q5RBT0 Programmed cell death protein 54.0e-1541.41Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT
        M D ELEA+R++R+ EL A+ G           AQ++A+    E R  +L+Q+L   AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI 
Subjt:  MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLIT

Query:  LLEQINNQTTKQTKVTIQRRRSVLEDDD
        +L++++ QT K T V   RR+ +  D+D
Subjt:  LLEQINNQTTKQTKVTIQRRRSVLEDDD

Arabidopsis top hitse value%identityAlignment
AT1G29850.1 double-stranded DNA-binding family protein7.7e-4683.21Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM---GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q N EQ+K QEDA+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MDDPELEAIRQRRMQELMAQRGM---GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        LITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.2 double-stranded DNA-binding family protein1.0e-4582.58Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM----GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
        M DPELEAIRQRRMQELMA++GM    G+Q N EQ+K QEDA+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE
Subjt:  MDDPELEAIRQRRMQELMAQRGM----GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEE

Query:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD
        RLITLLEQIN+QTTKQTKVT QRRR V  DDD
Subjt:  RLITLLEQINNQTTKQTKVTIQRRRSVLEDDD

AT1G29850.3 double-stranded DNA-binding family protein2.1e-4380.95Show/hide
Query:  MDDPELEAIRQRRMQELMAQRGM---GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
        M DPELEAIRQRRMQELMA++GM   G+Q N EQ+K QEDA+ EA+ERRQMMLSQ+LS QARER+ARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER
Subjt:  MDDPELEAIRQRRMQELMAQRGM---GSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEER

Query:  LITLLEQINNQTTKQTKVTIQRRRSV
        LITLLEQIN+QTTKQTKVT+    +V
Subjt:  LITLLEQINNQTTKQTKVTIQRRRSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATCCTGAACTAGAAGCAATCAGGCAAAGAAGAATGCAGGAACTCATGGCCCAGCGAGGCATGGGAAGCCAAAATAATTCCGAACAACAGAAGGCCCAGGAAGA
TGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTTTGTCAATGCAAGCAAGAGAAAGACTTGCTCGAATTGCTTTGGTGAAACCTGAGAAGGCAA
GAGGTGTTGAAGATGTTATATTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTATCGGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAACCAAACCACG
AAACAGACTAAAGTCACTATACAGAGGCGTCGAAGCGTTCTCGAGGATGATGATTAG
mRNA sequenceShow/hide mRNA sequence
CGATTATGTCAAGTCCATATGCATATGAAAATGTTAGAAATTGAATACTCTATTTCATACACTCATTCAAAGAAAGAAAAAGAAAAAATAGAACCCTAAATAAGAAATTA
GGAGATTCGATACGAGCTACAAGGAAAAAGTGGGTCGCGTCCCATAAACGCGTAACCGAGGAAATCCGTCTCTTCGTTTCCGCCTCTCCGGCTCATAGGAACATATTTTG
AACTGTAGTTCTACCAATTGTTAGCTCGCTCCCCGAAACAATGGATGATCCTGAACTAGAAGCAATCAGGCAAAGAAGAATGCAGGAACTCATGGCCCAGCGAGGCATGG
GAAGCCAAAATAATTCCGAACAACAGAAGGCCCAGGAAGATGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTTTGTCAATGCAAGCAAGAGAA
AGACTTGCTCGAATTGCTTTGGTGAAACCTGAGAAGGCAAGAGGTGTTGAAGATGTTATATTGAGAGCTGCACAGATGGGCCAAATTGTAGAGAAGGTATCGGAAGAGAG
GCTTATAACATTGCTAGAACAGATCAACAACCAAACCACGAAACAGACTAAAGTCACTATACAGAGGCGTCGAAGCGTTCTCGAGGATGATGATTAGCAAGTGACATGAA
TTGCACACCTTATATGATATATAATGCAAAAGCTGCTCAGAATTAGCAGGTATTACTGTTATTACAATTGTTGCAGTCAAAAATTTTCAAACAATTAAGCTGTGTTACAG
AGTCTTAACCTTGAACTATTATGTTGCTTTCTTATTTGTGATTGATCAGAGGAATTGAATTTCCTTCAATTCTTGGTGTAGTGTTCAATTAAGAGCCTGATATGTCACAG
TCTGATGAATTCCCACGAATTTAGAACAATAGAATACAGCTCTTGATAAAGAATGGATTTGGATTGCTTTGCTGTTTATATGTTAAATGATGAAATTGCATTTATTAACA
TCTTCTGTTTCAATATAAATGTGGAAGTTAAACAAGTACAAAGTACAAGTAGGGGTCAAATGCAACCCCCTTTTTTTTTGGACAGTAAGTTCACAATCAAACCTAACAAC
ACATTACATCAAGTTCACAATGCACCTTGAACACAAACAACAATGAACATACCTTGAACGTCCAGATGTAACAAATGACAGAGAGGGGCGATGGGCGACAAACGGACGAA
CGGTGAGATGCAAGTTCATGAGATTATGAGAGATGAGGGTGAGAAGAGAGATGTGAGTGAAGTTCATGAGAGAGATGAGAGTGAGATTATGAGAGATGAGGGTGGATGTG
AGAAAGATGAGAGTGAGACCTTGAGATAGATGAAAATTCGAGGCAAGAGATCTAGAGGCGTCTATTAAACTCCATAAGGCTATAACATAATATATATGATAATTGGTTTG
AGTTGAACTAATTTTCTTTCTGAACTTGTTAACCAAAACAAATTGATCGGTTCTTAAAAATCTTAACCCAACTCAAGTCGAACACTTACCTAATCCAACTCAACTCTTGT
GGTTTGGGTTAAGTTATTCGAATTCTTCATATCACCGAATTTTCTTTGTACAGCCCTAAGTACGAAGTGTATTTTCCTGGGAGATTTTGCATATGTTTGGTACTTTAGTC
AGGCCCATTATTTAATTGAGAGCATTTTCTGTTGTCCCTTTGTTGTGGGATTCTCTCTGTGTATCTTTTGGGTAGTGATGTGATGTCTTTATTTTGATAATACCAAGTCA
CATCAATCCATTTATGACTTTGATGTTGAAACTTTGCCATGGATATGGATCTCTGCTCTGTGGATAAAAGGATAGGGGTATTATTGGAAAATAATACTGAAAATATTCCT
CACAAAATAAGGATATTCCAGG
Protein sequenceShow/hide protein sequence
MDDPELEAIRQRRMQELMAQRGMGSQNNSEQQKAQEDARSEAEERRQMMLSQILSMQARERLARIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTT
KQTKVTIQRRRSVLEDDD