; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1572 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1572
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionE3 ubiquitin-protein ligase arkadia-A, putative
Genome locationMC01:19906506..19906877
RNA-Seq ExpressionMC01g1572
SyntenyMC01g1572
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052530.1 putative E3 ubiquitin-protein ligase arkadia-A [Cucumis melo var. makuwa]5.72e-7289.52Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        T+ +SHKLQNIPSFKLSRYSS ARDSDAGDDLRY SLKDILLNSPSYSGVNDFN+FNSSNISIRNELVKRAASAYLQSAAILVSRNES FV FWERLR K
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSRWWDCFHHVFGFFTFALD
        LAALRSRW DCFH +FGFF+FALD
Subjt:  LAALRSRWWDCFHHVFGFFTFALD

KAG7034735.1 hypothetical protein SDJN02_04465, partial [Cucurbita argyrosperma subsp. argyrosperma]7.79e-6486.21Show/hide
Query:  HKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALR
        HKLQN+PSFKLSRYSS  RDSDAGDDLRY SLKDILLNSPSYSGVN+FN+FN SNI+IRNELVKRAASAYLQSAAILV RNESCFV FWERLR KLAALR
Subjt:  HKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALR

Query:  SRWWDCFHHVFGFFTF
        SRW DCF   FGFF F
Subjt:  SRWWDCFHHVFGFFTF

XP_022146509.1 uncharacterized protein LOC111015712 [Momordica charantia]1.34e-66100Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSR
        LAALRSR
Subjt:  LAALRSR

XP_022925985.1 uncharacterized protein LOC111433238 [Cucurbita moschata]1.04e-6386.21Show/hide
Query:  HKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALR
        HKLQN+PSFKLSRYSS  RDSDAGDDLRY SLKDILLNSPSYSGVN+FN+FN SNI+IRNELVKRAASAYLQSAAILV RNESCFV FWERLR KLAALR
Subjt:  HKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALR

Query:  SRWWDCFHHVFGFFTF
        SRW DCF   FGFF F
Subjt:  SRWWDCFHHVFGFFTF

XP_022977989.1 uncharacterized protein LOC111478115 [Cucurbita maxima]4.43e-6583.61Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        T+ + HKLQN+PSFKLSRYSS  RDSDAGDDLRY SLKDILLNSPSYSGVN+FN+FN SNI+IRNELVKRAASAYLQSAAILV RNESCFV FWERLR K
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSRWWDCFHHVFGFFTFA
        LAALRSRW DCF   FGFF FA
Subjt:  LAALRSRWWDCFHHVFGFFTFA

TrEMBL top hitse value%identityAlignment
A0A0A0KKP9 Uncharacterized protein4.03e-7087.1Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        T+ + H+LQNIPSFKLSRYSS ARDSDA DDLRY SLKDILLNSPSYSGVNDFN+FNSSNISIRNELVKRAASAYLQSAAILVSRNES FV FWERLR K
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSRWWDCFHHVFGFFTFALD
        LAALRSRW DCFH +FGFF+FALD
Subjt:  LAALRSRWWDCFHHVFGFFTFALD

A0A5A7UBK0 Putative E3 ubiquitin-protein ligase arkadia-A2.77e-7289.52Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        T+ +SHKLQNIPSFKLSRYSS ARDSDAGDDLRY SLKDILLNSPSYSGVNDFN+FNSSNISIRNELVKRAASAYLQSAAILVSRNES FV FWERLR K
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSRWWDCFHHVFGFFTFALD
        LAALRSRW DCFH +FGFF+FALD
Subjt:  LAALRSRWWDCFHHVFGFFTFALD

A0A6J1CYB8 uncharacterized protein LOC1110157126.47e-67100Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSR
        LAALRSR
Subjt:  LAALRSR

A0A6J1EJR7 uncharacterized protein LOC1114332385.05e-6486.21Show/hide
Query:  HKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALR
        HKLQN+PSFKLSRYSS  RDSDAGDDLRY SLKDILLNSPSYSGVN+FN+FN SNI+IRNELVKRAASAYLQSAAILV RNESCFV FWERLR KLAALR
Subjt:  HKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALR

Query:  SRWWDCFHHVFGFFTF
        SRW DCF   FGFF F
Subjt:  SRWWDCFHHVFGFFTF

A0A6J1ISV4 uncharacterized protein LOC1114781152.14e-6583.61Show/hide
Query:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK
        T+ + HKLQN+PSFKLSRYSS  RDSDAGDDLRY SLKDILLNSPSYSGVN+FN+FN SNI+IRNELVKRAASAYLQSAAILV RNESCFV FWERLR K
Subjt:  TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNK

Query:  LAALRSRWWDCFHHVFGFFTFA
        LAALRSRW DCF   FGFF FA
Subjt:  LAALRSRWWDCFHHVFGFFTFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G18395.1 unknown protein9.0e-0734.78Show/hide
Query:  DSDAGDDLRYISLKDILLNS---------PSYSGVND----FNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAA
        D +  ++L+Y SLKD++ +S         P YS  +      ++ +SSNI+I NELVKRAAS Y+QS+ I+++ + + F  F  + +++  A
Subjt:  DSDAGDDLRYISLKDILLNS---------PSYSGVND----FNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACCATTTCGGAATCCCACAAGCTCCAGAACATACCTTCTTTCAAGCTGTCCCGGTACTCCTCCGGCGCACGCGACTCCGACGCCGGCGACGACCTCCGCTACATCAGCCT
CAAAGACATCCTCCTGAACTCCCCCTCCTACAGCGGCGTCAACGACTTCAACGACTTCAATTCCTCCAACATCTCCATACGGAATGAGCTCGTCAAGCGCGCCGCCTCCG
CCTACCTCCAATCGGCGGCCATCCTCGTCAGCCGCAACGAAAGCTGCTTCGTCAGCTTCTGGGAACGCCTCCGGAACAAACTCGCCGCCCTCCGCTCCCGCTGGTGGGAT
TGCTTTCACCACGTTTTTGGATTCTTTACTTTTGCCCTAGAC
mRNA sequenceShow/hide mRNA sequence
ACCATTTCGGAATCCCACAAGCTCCAGAACATACCTTCTTTCAAGCTGTCCCGGTACTCCTCCGGCGCACGCGACTCCGACGCCGGCGACGACCTCCGCTACATCAGCCT
CAAAGACATCCTCCTGAACTCCCCCTCCTACAGCGGCGTCAACGACTTCAACGACTTCAATTCCTCCAACATCTCCATACGGAATGAGCTCGTCAAGCGCGCCGCCTCCG
CCTACCTCCAATCGGCGGCCATCCTCGTCAGCCGCAACGAAAGCTGCTTCGTCAGCTTCTGGGAACGCCTCCGGAACAAACTCGCCGCCCTCCGCTCCCGCTGGTGGGAT
TGCTTTCACCACGTTTTTGGATTCTTTACTTTTGCCCTAGAC
Protein sequenceShow/hide protein sequence
TISESHKLQNIPSFKLSRYSSGARDSDAGDDLRYISLKDILLNSPSYSGVNDFNDFNSSNISIRNELVKRAASAYLQSAAILVSRNESCFVSFWERLRNKLAALRSRWWD
CFHHVFGFFTFALD