; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g1594 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1594
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionF-box protein SKIP19-like
Genome locationMC01:20093298..20095279
RNA-Seq ExpressionMC01g1594
SyntenyMC01g1594
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001611 - Leucine-rich repeat
IPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]1.40e-15071.1Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI INI++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSN+LR+LR+V C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYE+  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYADFYF
        SDY D YF
Subjt:  SDYADFYF

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]2.36e-226100Show/hide
Query:  SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQ
        SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQ
Subjt:  SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQ

Query:  YITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSS
        YITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSS
Subjt:  YITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSS

Query:  LTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSD
        LTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSD
Subjt:  LTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSD

Query:  YADFYF
        YADFYF
Subjt:  YADFYF

XP_022925897.1 F-box protein SKIP19-like isoform X1 [Cucurbita moschata]2.81e-15071.43Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI I I++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLR LR+V C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYADFYF
        SDY D YF
Subjt:  SDYADFYF

XP_022978592.1 F-box protein SKIP19-like [Cucurbita maxima]1.63e-14871.38Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI INI++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLR+LR+V C+ I+D G  +AVSKLPLLE LEIS  SF  +TLET+G C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYA
        SDY 
Subjt:  SDYA

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]9.83e-15171.43Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI INI++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        L YITQSSNQLR+LR+V C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYADFYF
        SDY D YF
Subjt:  SDYADFYF

TrEMBL top hitse value%identityAlignment
A0A5A7UDI0 F-box protein SKIP19-like isoform X12.16e-13767.1Show/hide
Query:  SNPISGD-EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        SNP S + E+RNWLELP D+TSMIL KLG +EIL+ AQ VCS WRKIC+DPLMWRV+DM    +W DMDYDLE+MC QAV RSCGELI INI++FGT++L
Subjt:  SNPISGD-EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        L+YITQS NQL RLR+V C+ I+D GL EAVSKLPLLE LE+S CSF  +TL T+G+ C  LKSLKL+ Q  RR  ++CD+ A+AIA+NMPNLR+L IFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDY--PSGFSDIDFLTEDDDYYEWSGGS
        ++LT+RGL+AIL GC  LESLDLRQCFNL+L GQLG +C+E+IK LRLPHDPTDD EF  E     DDD+ D+DY  P G SD D LT+DDDYYE+SGGS
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDY--PSGFSDIDFLTEDDDYYEWSGGS

Query:  NFSDYADFYF
        +FSDY D YF
Subjt:  NFSDYADFYF

A0A6J1CXS5 F-box protein SKIP19-like1.14e-226100Show/hide
Query:  SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQ
        SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQ
Subjt:  SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQ

Query:  YITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSS
        YITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSS
Subjt:  YITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSS

Query:  LTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSD
        LTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSD
Subjt:  LTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSD

Query:  YADFYF
        YADFYF
Subjt:  YADFYF

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.36e-15071.43Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI I I++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLR LR+V C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYADFYF
        SDY D YF
Subjt:  SDYADFYF

A0A6J1EGI8 F-box protein SKIP19-like isoform X22.26e-14871.38Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI I I++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLR LR+V C+ I+D GL +AVSKLPLLE LEIS  SF  +TLET+G+C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYA
        SDY 
Subjt:  SDYA

A0A6J1ILH5 F-box protein SKIP19-like7.90e-14971.38Show/hide
Query:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL
        S+P S G+EARNWLELPAD+TSMILLKLG ++IL++AQ VCS WRKIC+DPLMWRVVDM   G+W DMDYDLE+MC QAVDRSCG+LI INI++FGT++L
Subjt:  SNPIS-GDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNEL

Query:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG
        LQYITQSSNQLR+LR+V C+ I+D G  +AVSKLPLLE LEIS  SF  +TLET+G C  LLKSLKL+ Q  RR  ++CD+ A+AIAENMPNLR+LQIFG
Subjt:  LQYITQSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFG

Query:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF
        +SLT+RGL+AILDGCPDLESLDLRQCFNL+L GQLG +C+E+IK+LRLPHDPTDDYEF  E   +GDD   D  YP G SD D LT+DDDYYE+SGGS+F
Subjt:  SSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNF

Query:  SDYA
        SDY 
Subjt:  SDYA

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 223.4e-6044.84Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ
        ++  NW ELP D+ S ILL+L  +EIL +A+ VC  WR++ KDPL+WR +DM N+      Y +E  C   VD S G L++ NI    F T  LL Y+ +
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ

Query:  SSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR
         S+ LRRLR V+   IT  G+ EA+ KLPLLE LE+  CS  E+  +T+G+ C  LK+LKL        + + D DA+AIA+ MP L +LQ+  + LT+ 
Subjt:  SSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR

Query:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF
        GL AILDGCP LE LDLRQCFN++L G L  +C ERIK  R P+D  DDY +++ +D    +D     +E+Y  G  D ++
Subjt:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF

Q9M0U7 Putative F-box protein At4g054751.1e-5543.35Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        +E  NW++LP ++T+ ILL+L   +IL +A+ +C  WR+ICKDP MWR +++ +   +  ++D E MC   VD S G L++INI++F ++ LL YI   S
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI
          L+ L I     +T+ G+   + KLPLLE L I   S  +  L+ +G  C  LK+LKL+                 +++CD DA+AIAE+MP LR+LQ+
Subjt:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI

Query:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV
         G+ LT+ GL AILDGCP LE  LD+R+CFN++LVG L   C +RIK LR PHD T DY + +
Subjt:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV

Q9M0U9 F-box protein SKIP192.5e-7953.47Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        E+ NW ELP ++TS IL +LGAIEIL +AQ VC  WR++CKDP MWR +DMHN+G+  DMDY+LE MC  AVDRS G L+DI I YFGT +LL YI   S
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL
        + LR LR++RC  ITD G  EAV KLP LE LE+S CSF+ ++L  VG+CC  +K+LKL+    +    + D DA+AIAE MP LR+LQ+ G+ L+D GL
Subjt:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL

Query:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD
         AILD C +LE LDLR+CFN++LVG L   C E +K +R P+D   D +            S DED P  FSDID ++ DDD   YY++SG S+FSDY  
Subjt:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD

Query:  FYF
        F F
Subjt:  FYF

Q9S9V8 Putative F-box/LRR-repeat protein 91.4e-5346.75Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYIT
        E RNW ELP ++TS ILL+LGAIEIL +AQ VC  WR++C+DP MWR +D+    + +   ++ Y +E +C +AVD S G L++INI Y      L YI 
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYIT

Query:  QSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLT
          S+ LRRL +V C  +   G+ EA  KLPLLE L+I+   S  E+ L+ VG+ C  L++LKL+C      +  CD+ A+AIAE MP LR+LQ+F + L+
Subjt:  QSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLT

Query:  DRGLQAILDGCPDLESLDLRQCFNLDLVGQL
        + GL AIL+GCP L++L L QC N+++VG +
Subjt:  DRGLQAILDGCPDLESLDLRQCFNLDLVGQL

Q9S9V9 Putative F-box/LRR-repeat protein 239.5e-7151.27Show/hide
Query:  RNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQ
        RNW ELP+ +TS ILL+LGAIEIL +AQ VC  W ++CKDP MWR +D+ N  +     YDLE MC  AVDRS G LI+I I Y+GTN+L+ YI   S+ 
Subjt:  RNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGE-WDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQ

Query:  LRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLD-CQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQ
        L+ L +VRC  ITD G+++AVSK+PLLE+LE+S C F+ ++L  +GR C  LK+LKL+   +        D +A AIAE+MP LR+LQ+ G+ LT++GL 
Subjt:  LRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLD-CQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQ

Query:  AILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDF
        AILDGCP LE LDLRQCFN++LVG L   C ERIK LR P+D  DD +        G D+     + S F++ D+
Subjt:  AILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDF

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein1.8e-8053.47Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        E+ NW ELP ++TS IL +LGAIEIL +AQ VC  WR++CKDP MWR +DMHN+G+  DMDY+LE MC  AVDRS G L+DI I YFGT +LL YI   S
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEW-DMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL
        + LR LR++RC  ITD G  EAV KLP LE LE+S CSF+ ++L  VG+CC  +K+LKL+    +    + D DA+AIAE MP LR+LQ+ G+ L+D GL
Subjt:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGL

Query:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD
         AILD C +LE LDLR+CFN++LVG L   C E +K +R P+D   D +            S DED P  FSDID ++ DDD   YY++SG S+FSDY  
Subjt:  QAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDD---YYEWSGGSNFSDYAD

Query:  FYF
        F F
Subjt:  FYF

AT4G05470.1 RNI-like superfamily protein1.6e-5243.4Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINI-QYFGTNELLQYITQSS
        E RNW++LP ++T+ ILL+L   +IL +AQ VC  WR+ICKDP MWR ++  +   +  ++D   MC   VD S G L++IN+ ++F ++ LL YIT   
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINI-QYFGTNELLQYITQSS

Query:  NQLRRLRIVRCH-SITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKL----------DCQDCR----RGMIDCDRDAIAIAENMPNL
          LR L +  C   +T  G+  A++K+PLLE LE++  S  +  L+ +G  C  LK+LKL          D  D       G ++CD DA+AIAE+MP L
Subjt:  NQLRRLRIVRCH-SITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKL----------DCQDCR----RGMIDCDRDAIAIAENMPNL

Query:  RYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEF
         +LQ+  + LT+ GL AILDGCP LE LD+R+CF + LVG L   C E IK LR P D T DY +
Subjt:  RYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEF

AT4G05475.1 RNI-like superfamily protein8.0e-5743.35Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS
        +E  NW++LP ++T+ ILL+L   +IL +A+ +C  WR+ICKDP MWR +++ +   +  ++D E MC   VD S G L++INI++F ++ LL YI   S
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSS

Query:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI
          L+ L I     +T+ G+   + KLPLLE L I   S  +  L+ +G  C  LK+LKL+                 +++CD DA+AIAE+MP LR+LQ+
Subjt:  NQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRG----------MIDCDRDAIAIAENMPNLRYLQI

Query:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV
         G+ LT+ GL AILDGCP LE  LD+R+CFN++LVG L   C +RIK LR PHD T DY + +
Subjt:  FGSSLTDRGLQAILDGCPDLES-LDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIV

AT4G05490.1 RNI-like superfamily protein2.4e-6144.84Show/hide
Query:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ
        ++  NW ELP D+ S ILL+L  +EIL +A+ VC  WR++ KDPL+WR +DM N+      Y +E  C   VD S G L++ NI    F T  LL Y+ +
Subjt:  DEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQY--FGTNELLQYITQ

Query:  SSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR
         S+ LRRLR V+   IT  G+ EA+ KLPLLE LE+  CS  E+  +T+G+ C  LK+LKL        + + D DA+AIA+ MP L +LQ+  + LT+ 
Subjt:  SSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDR

Query:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF
        GL AILDGCP LE LDLRQCFN++L G L  +C ERIK  R P+D  DDY +++ +D    +D     +E+Y  G  D ++
Subjt:  GLQAILDGCPDLESLDLRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSL---DEDYPSGFSDIDF

AT4G05497.1 RNI-like superfamily protein9.8e-5546.75Show/hide
Query:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYIT
        E RNW ELP ++TS ILL+LGAIEIL +AQ VC  WR++C+DP MWR +D+    + +   ++ Y +E +C +AVD S G L++INI Y      L YI 
Subjt:  EARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDM----HNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYIT

Query:  QSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLT
          S+ LRRL +V C  +   G+ EA  KLPLLE L+I+   S  E+ L+ VG+ C  L++LKL+C      +  CD+ A+AIAE MP LR+LQ+F + L+
Subjt:  QSSNQLRRLRIVRCHSITDTGLSEAVSKLPLLEHLEISL-CSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLT

Query:  DRGLQAILDGCPDLESLDLRQCFNLDLVGQL
        + GL AIL+GCP L++L L QC N+++VG +
Subjt:  DRGLQAILDGCPDLESLDLRQCFNLDLVGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGAACCCCATCTCCGGAGACGAAGCGAGGAACTGGCTTGAACTGCCTGCAGACATCACGTCCATGATTCTTCTCAAGCTAGGCGCCATTGAAATCCTCTCGAGCGCGCA
GAGCGTCTGCTCTTTGTGGCGTAAGATCTGTAAGGACCCTCTCATGTGGCGTGTCGTCGATATGCACAACATGGGTGAGTGGGACATGGACTACGATTTGGAGCAGATGT
GCATTCAGGCTGTTGACCGTAGTTGTGGCGAACTGATCGACATCAACATTCAGTACTTTGGCACCAATGAGTTGCTCCAATATATCACTCAGAGTTCAAATCAACTTAGA
AGACTCCGGATTGTACGTTGTCATAGCATCACGGATACAGGATTGTCTGAAGCAGTTTCGAAACTTCCATTGTTGGAACATCTTGAAATATCTCTCTGTTCGTTTACAGA
GAAAACTTTGGAAACCGTTGGACGGTGTTGCCGTCTTCTGAAATCATTAAAACTTGACTGTCAGGATTGCAGAAGAGGAATGATTGATTGTGATAGGGATGCCATTGCCA
TTGCTGAAAATATGCCTAATTTACGTTACCTTCAGATATTTGGAAGCAGTCTAACAGACAGGGGCTTGCAAGCCATTCTTGACGGTTGTCCTGATTTAGAATCCCTTGAT
TTGCGTCAGTGTTTCAATTTAGATTTGGTTGGACAATTGGGGGTAGAATGTGCTGAAAGGATTAAACATTTGCGCTTGCCTCATGATCCCACGGATGACTATGAATTTAT
TGTCGAAACTGATGGTTTTGGTGATGATGATTCTCTTGATGAAGATTATCCTTCCGGTTTCTCTGACATTGATTTCTTGACTGAAGATGATGATTACTATGAATGGTCAG
GAGGCAGCAACTTCTCGGACTATGCGGATTTTTACTTT
mRNA sequenceShow/hide mRNA sequence
TCGAACCCCATCTCCGGAGACGAAGCGAGGAACTGGCTTGAACTGCCTGCAGACATCACGTCCATGATTCTTCTCAAGCTAGGCGCCATTGAAATCCTCTCGAGCGCGCA
GAGCGTCTGCTCTTTGTGGCGTAAGATCTGTAAGGACCCTCTCATGTGGCGTGTCGTCGATATGCACAACATGGGTGAGTGGGACATGGACTACGATTTGGAGCAGATGT
GCATTCAGGCTGTTGACCGTAGTTGTGGCGAACTGATCGACATCAACATTCAGTACTTTGGCACCAATGAGTTGCTCCAATATATCACTCAGAGTTCAAATCAACTTAGA
AGACTCCGGATTGTACGTTGTCATAGCATCACGGATACAGGATTGTCTGAAGCAGTTTCGAAACTTCCATTGTTGGAACATCTTGAAATATCTCTCTGTTCGTTTACAGA
GAAAACTTTGGAAACCGTTGGACGGTGTTGCCGTCTTCTGAAATCATTAAAACTTGACTGTCAGGATTGCAGAAGAGGAATGATTGATTGTGATAGGGATGCCATTGCCA
TTGCTGAAAATATGCCTAATTTACGTTACCTTCAGATATTTGGAAGCAGTCTAACAGACAGGGGCTTGCAAGCCATTCTTGACGGTTGTCCTGATTTAGAATCCCTTGAT
TTGCGTCAGTGTTTCAATTTAGATTTGGTTGGACAATTGGGGGTAGAATGTGCTGAAAGGATTAAACATTTGCGCTTGCCTCATGATCCCACGGATGACTATGAATTTAT
TGTCGAAACTGATGGTTTTGGTGATGATGATTCTCTTGATGAAGATTATCCTTCCGGTTTCTCTGACATTGATTTCTTGACTGAAGATGATGATTACTATGAATGGTCAG
GAGGCAGCAACTTCTCGGACTATGCGGATTTTTACTTT
Protein sequenceShow/hide protein sequence
SNPISGDEARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDYDLEQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLR
RLRIVRCHSITDTGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAIAIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLD
LRQCFNLDLVGQLGVECAERIKHLRLPHDPTDDYEFIVETDGFGDDDSLDEDYPSGFSDIDFLTEDDDYYEWSGGSNFSDYADFYF