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MC01g1635 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1635
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationMC01:20552726..20552996
RNA-Seq ExpressionMC01g1635
SyntenyMC01g1635
Gene Ontology termsGO:0010467 - gene expression (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OVA10193.1 hypothetical protein BVC80_1593g16 [Macleaya cordata]3.78e-0835.71Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        LR  NE  L+KW W F K+   LW+++I  KY PH SEW    +S      C KT  ++ +   I+Q     +  G+   FW D
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

RVW30588.1 Nicastrin [Vitis vinifera]7.95e-0833.33Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        + +RN   L KW W + K+  ALWH++I+S Y  H++ W    +     +  +K   ++F  F  S+F    +G+G  I FWED
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

RVW81136.1 Nicastrin [Vitis vinifera]2.28e-0834.52Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        + +RN   L KW W + K+  ALWH++I+S Y  H++ W    +     +  QK   ++F  F  S+F    +G+G  I FWED
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

TYK07811.1 hypothetical protein E5676_scaffold1737G001050 [Cucumis melo var. makuwa]1.78e-1039.76Show/hide
Query:  TLRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKG--CQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        + R +N   LTKW W FSK+  ALW  +IV+ Y    S W +   SKG   +  +G+L  +     F    LGEGT I FW+D
Subjt:  TLRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKG--CQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]3.13e-1346.43Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQ----KTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        LR+RNE FL KW W F  +  ALW +IIVSKY  H S+W+ A GSK       K     F  F +S  L+  +G+G   YFWED
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQ----KTSGVLFFRFIISQFLKCFLGEGTCIYFWED

TrEMBL top hitse value%identityAlignment
A0A200QI61 Uncharacterized protein1.83e-0835.71Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        LR  NE  L+KW W F K+   LW+++I  KY PH SEW    +S      C KT  ++ +   I+Q     +  G+   FW D
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

A0A2N9EBV2 Reverse transcriptase domain-containing protein2.22e-0834.88Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQKTSGVLFFRFI------ISQFLKCFLGEGTCIYFWED
        +R+ NE  L KW W +  + +ALW ++I  KY      W+S    K  + + GV  ++FI       S+F+K  +G+G+CI+ WED
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQKTSGVLFFRFI------ISQFLKCFLGEGTCIYFWED

A0A438H9D6 Nicastrin1.10e-0834.52Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        + +RN   L KW W + K+  ALWH++I+S Y  H++ W    +     +  QK   ++F  F  S+F    +G+G  I FWED
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEW----VSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

A0A5D3C7F0 Uncharacterized protein8.62e-1139.76Show/hide
Query:  TLRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKG--CQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        + R +N   LTKW W FSK+  ALW  +IV+ Y    S W +   SKG   +  +G+L  +     F    LGEGT I FW+D
Subjt:  TLRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKG--CQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED

A0A6J1DFI2 uncharacterized protein LOC1110196241.52e-1346.43Show/hide
Query:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQ----KTSGVLFFRFIISQFLKCFLGEGTCIYFWED
        LR+RNE FL KW W F  +  ALW +IIVSKY  H S+W+ A GSK       K     F  F +S  L+  +G+G   YFWED
Subjt:  LRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQ----KTSGVLFFRFIISQFLKCFLGEGTCIYFWED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TATTTAAAATNTTGGACATTAGTAACCTTACGCATGCGTAATGAAACCTTCTTGACCAAATGGCCGTGGCATTTCTCTAAGGATTCGAAAGCTTTATGGCATAGGATCAT
TGTGAGTAAATACCACCCACATGCTTCTGAGTGGGTCTCGGCTTGCGGGTCTAAAGGCTGTCAAAAAACCTCTGGAGTGCTATTTTTCAGGTTTATCATCTCCCAATTTC
TAAAATGCTTTCTTGGGGAAGGTACATGTATTTACTTTTGGGAGGAC
mRNA sequenceShow/hide mRNA sequence
TATTTAAAATNTTGGACATTAGTAACCTTACGCATGCGTAATGAAACCTTCTTGACCAAATGGCCGTGGCATTTCTCTAAGGATTCGAAAGCTTTATGGCATAGGATCAT
TGTGAGTAAATACCACCCACATGCTTCTGAGTGGGTCTCGGCTTGCGGGTCTAAAGGCTGTCAAAAAACCTCTGGAGTGCTATTTTTCAGGTTTATCATCTCCCAATTTC
TAAAATGCTTTCTTGGGGAAGGTACATGTATTTACTTTTGGGAGGAC
Protein sequenceShow/hide protein sequence
YLKXWTLVTLRMRNETFLTKWPWHFSKDSKALWHRIIVSKYHPHASEWVSACGSKGCQKTSGVLFFRFIISQFLKCFLGEGTCIYFWED