CuGenDBv2

Gene ID	MC01g1640
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Vacuolar ATPase assembly integral membrane protein VMA21 homolog
Genome location	MC01:20595419..20599284
RNA-Seq Expression	MC01g1640
Synteny	MC01g1640
Gene Ontology terms	GO:0070072 - vacuolar proton-transporting V-type ATPase complex assembly (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0012507 - ER to Golgi transport vesicle membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0033116 - endoplasmic reticulum-Golgi intermediate compartment membrane (cellular component)
InterPro domains	IPR019013 - Vacuolar ATPase assembly integral membrane protein Vma21

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134542.1 uncharacterized protein LOC101206493 [Cucumis sativus]

4.14e-53

88.68

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA+VIMKFF ASLFMWITPI LL+GFNHN IPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDP FLAEAKASINQS G+AD PSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  -NKKED
         NKKE+
Subjt:  -NKKED

XP_022146488.1 uncharacterized protein LOC111015696 [Momordica charantia]

1.40e-62

100

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
        NKKED
Subjt:  NKKED

XP_022926009.1 uncharacterized protein LOC111433255 [Cucurbita moschata]

1.76e-54

88.57

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKASINQS G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

XP_022977993.1 uncharacterized protein LOC111478118 [Cucurbita maxima]

2.91e-53

86.67

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKASINQ+ G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

XP_038882777.1 protein SUPPRESSOR OF FRI 4-like isoform X1 [Benincasa hispida]

4.00e-52

89.62

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MASVI KFF ASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAFL EAKASINQS G+ ++PSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  -NKKED
         NKKE+
Subjt:  -NKKED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPB7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

3.76e-51

88.68

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA+VIMKFF ASLFMWITPI LL+GFNHN IPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDP FLAEAKASINQS G+AD PSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  -NKKED
         NKKE+
Subjt:  -NKKED

A0A1S4DTT6 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.92e-51

85.85

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA+VI KFF ASLFMWITPI LL+GFNHN IPGST+LNPHSLTLLSGFLAVISVNVVI IYIIMAMKEP+SKHEPDPAFLAEAKASINQS G+AD PS+A
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  -NKKED
         NKKE+
Subjt:  -NKKED

A0A6J1CYA2 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

6.79e-63

100

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
        NKKED
Subjt:  NKKED

A0A6J1EJT7 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

8.51e-55

88.57

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKASINQS G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

A0A6J1ISV9 Vacuolar ATPase assembly integral membrane protein VMA21 homolog

1.41e-53

86.67

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA VI KFF ASLFMWITPI LLYGFNHNLIPGST LNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEP+SKHEPDPAF+AEAKASINQ+ G+A+DPSQA
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
        N K++
Subjt:  NKKED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G05780.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

1.3e-30

65.09

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQ-SAGEADDPSQ
        MA V+ KF  AS+FMWI P+A+LYGFNHNL+PGST L+PHSL LLSGFLAV+SVN VI  YI MAMKEPA KH+PD AFLAEAK S+N+ + G       
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQ-SAGEADDPSQ

Query:  ANKKED
        A KK++
Subjt:  ANKKED

AT2G31710.1 Vacuolar ATPase assembly integral membrane protein VMA21-like domain

7.1e-29

60.95

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Query:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA
        MA V+ KF  AS+FMWI PIA+LYGFN++L+PGST L+PHSLTLLSGFLAV+SVNVVI  YI +A+KEPA KH+PD +F+AEAK S+ +      +   A
Subjt:  MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQA

Query:  NKKED
         KK++
Subjt:  NKKED

Sequences

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CDS sequence

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ATGGCAAGCGTCATAATGAAGTTCTTCACTGCATCACTGTTTATGTGGATAACCCCCATCGCGTTGTTATATGGTTTTAACCATAATTTGATTCCTGGTTCAACACAATT
GAATCCACATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATCGCCATTTATATTATAATGGCAATGAAAGAACCCGCTAGTAAACACG
AACCAGATCCTGCATTTCTTGCTGAGGCGAAAGCTAGTATAAACCAGTCTGCTGGGGAAGCAGATGACCCCTCGCAAGCTAATAAGAAGGAAGATTAG

mRNA sequence

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CCTCAATTGACTCTTCGCCACCTCCTCTAGACAAAACCTTCTCCTCCATCTCTCGACAGTCGACAACTCTTCATCATCGGTCGATCGGCTGTTCCAAAATCTCCCCAGAA
TCTCGATTTTGCCCATCCTTCTAGCTCTTGCGAAGTGCAACTGCATTTGAACCCCCAATTTGGAACTTCGAAGCCCTAATTTGCGGTCCAAATCTGCCATCTGACGTGTC
CTGTGCCCTGATCTTAAGTCTTCTGGAATCCATTTCGTATCCTCCATGGCAATGCAAGTCCAATTGTGAGACATCATTCAAGACATTGTTTACTATTGAAGGTACGAATG
GCAAGCGTCATAATGAAGTTCTTCACTGCATCACTGTTTATGTGGATAACCCCCATCGCGTTGTTATATGGTTTTAACCATAATTTGATTCCTGGTTCAACACAATTGAA
TCCACATTCTCTTACACTATTGAGTGGATTCCTTGCTGTCATATCAGTCAACGTTGTCATCGCCATTTATATTATAATGGCAATGAAAGAACCCGCTAGTAAACACGAAC
CAGATCCTGCATTTCTTGCTGAGGCGAAAGCTAGTATAAACCAGTCTGCTGGGGAAGCAGATGACCCCTCGCAAGCTAATAAGAAGGAAGATTAGGAAATGAGAGAGAGG
CTTTGACGAGGAACATTTTGAAGCTTAATCTTCCAGGATTTGAGATATGAATCAGTCTCATATGTGATCAGAGCTGTCTGCTTGTGAATGATACTTGGGAAGAACAAAAG
GTTCTGTTTCTCCTCTAGTTTTGTTTCATTAAAATAGACTGCATTTAGAGTGAGCTAATTTTCTAATGGTGATGTGATTTGCGATGTTTCAACTCTTTGCTTCCACTATC
ATGAAGTGAAGAGATGTAATAGCTTCTGGGGAGAATTAAAAGAAAATTTAATTTAACATAATCCTGATGAACAGAGCTCGGCCTTAGTCTAAGGACCATTCATCTACTCA
TAGTTTCAACAAGAACCAAGATCATTTGAACCTCTATTTATTAAGACGTTTTTTTTAATAAACAATTTAACGATCATTTAAG

Protein sequence

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MASVIMKFFTASLFMWITPIALLYGFNHNLIPGSTQLNPHSLTLLSGFLAVISVNVVIAIYIIMAMKEPASKHEPDPAFLAEAKASINQSAGEADDPSQANKKED

MC01g1640 (gene) of Bitter gourd (Dali-11) v1 genome