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MC01g1683 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g1683
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationMC01:20974686..20974772
RNA-Seq ExpressionMC01g1683
SyntenyMC01g1683
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ART33342.1 dysfunctional tapetum 1 [Tapiscia sinensis]6.00e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
KAF3948530.1 hypothetical protein CMV_025485 [Castanea mollissima]5.91e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
KDP20835.1 hypothetical protein JCGZ_21306 [Jatropha curcas]5.38e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
XP_022930020.1 transcription factor DYT1 [Cucurbita moschata]1.55e-07100Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLLLLRATVPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
XP_030973145.1 transcription factor DYT1 [Quercus lobata]5.91e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
TrEMBL top hitse value%identityAlignment
A0A067JLF3 BHLH domain-containing protein2.60e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
A0A1Y0B6D2 Dysfunctional tapetum 12.90e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
A0A6J1EVV3 transcription factor DYT17.52e-08100Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLLLLRATVPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
A0A6P5X4W9 transcription factor DYT1-like6.60e-0689.66Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LR+ VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
A0A7N2LV27 BHLH domain-containing protein2.86e-0693.1Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNLHAERRRRQKLSDRLL LRA VPIIT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G10570.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.2e-0472.41Show/hide
Query:  SKNLHAERRRRQKLSDRLLLLRATVPIIT
        SKNL AERRRR++L+DRL LLR+ VP IT
Subjt:  SKNLHAERRRRQKLSDRLLLLRATVPIIT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGAAGAACCTCCATGCGGAGAGACGACGGAGGCAGAAGCTTAGTGATAGGCTATTATTATTACGTGCTACTGTCCCAATCATCACA
mRNA sequenceShow/hide mRNA sequence
TCGAAGAACCTCCATGCGGAGAGACGACGGAGGCAGAAGCTTAGTGATAGGCTATTATTATTACGTGCTACTGTCCCAATCATCACA
Protein sequenceShow/hide protein sequence
SKNLHAERRRRQKLSDRLLLLRATVPIIT