; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC01g_new0366 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC01g_new0366
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Descriptionvegetative cell wall protein gp1-like
Genome locationMC01:15790858..15791325
RNA-Seq ExpressionMC01g_new0366
SyntenyMC01g_new0366
Gene Ontology termsNA
InterPro domainsIPR044959 - Classical arabinogalactan protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036330.1 hypothetical protein E6C27_scaffold18G001290 [Cucumis melo var. makuwa]2.23e-4266.87Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTS-TPTPTPI--P
        MGFSGVR VVIF+LL   C+AQ+P PAP  P         PAPSPV  PP+PTP+PNRAPSP+PTP SPSPAP+APSP P  P+PAP    PTPTPI  P
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTS-TPTPTPI--P

Query:  SPSGSPAGAPVPAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVL
        +PSG P    VP   SPPSP   G+ VPSPAPQ PPADNPAGAAS IG AAT GIALAGTLFAV+L
Subjt:  SPSGSPAGAPVPAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVL

XP_022950235.1 vegetative cell wall protein gp1-like [Cucurbita moschata]9.77e-2957.46Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-------------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP---------
        MG SGVR+VVIF+L+A  C AQ+P P P+               PAPSPV FPP+P+ SP RAPSP+PT ASPSPA EAPSP P+A +PAP         
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-------------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP---------

Query:  -TSTPTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
         TS PTP P   P PSGSPAGAPV P   SPPSP+ +G   PSP P+ P AD+PAGAAS IG A T GIA+AGTL A+V+A
Subjt:  -TSTPTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

XP_022978568.1 vegetative cell wall protein gp1-like [Cucurbita maxima]4.81e-3159.89Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP----------TST
        MGFSGVR+VVIF+L+A  C AQ+P PA   P         PAPSPV FPP+P+ SP RAPSP+PT ASPSPA EAPSP P+A +PAP          TS 
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP----------TST

Query:  PTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
        PTP P   P PSGSPAGAPV P   SPPSP+ +G   PSP P+ P AD+PAGAAS IG A T GIA+AGTL A+V+A
Subjt:  PTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

XP_023544207.1 vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]1.08e-3058.56Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-------------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP---------
        MGFSGVR+VVIF+L+A  C+AQ+P P P+               PAPSPV FPPAP+ SP RAPSP+PT ASPSPA EAPSP P+A +PAP         
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-------------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP---------

Query:  -TSTPTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
         TS PTP P   P PSGSPAGAPV P   SPPSP+  G   PSP P+ P AD+PAGAAS IG A T GIA+AGTL A+V+A
Subjt:  -TSTPTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

XP_038881138.1 vegetative cell wall protein gp1-like [Benincasa hispida]2.33e-3967.88Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAP--SQP-------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPS
        MGFSGVR VVIF+LL   C+AQ+P PAP  SQP       PAPSPV FPP+PTP+PNRAPS +P PASPSPAPEAPSP PA P+PAP +T  PTP PS S
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAP--SQP-------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPS

Query:  GSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
         +P+G PV P   SPPSP   G+ VPS APQ P ADNPAGAAS IG AA FGIA+AGTLFAV+LA
Subjt:  GSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

TrEMBL top hitse value%identityAlignment
A0A0A0KG74 Uncharacterized protein1.43e-3662.42Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPI--PS
        MGFSGVR V+IF+LL   C+AQ+P PAP  P         PAPSPV  PP+PTP+PNRAPSP+PTP SPSPAP+A     A+P+PAP + PTPTPI  P+
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPI--PS

Query:  PSGSPAGAPVPAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVL
        PSG P    +P   SPPSP   G+ VPSPAPQ P ADNPAGA S IG AAT GIALAGTLF V+L
Subjt:  PSGSPAGAPVPAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVL

A0A5D3CNQ6 Uncharacterized protein1.08e-4266.87Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTS-TPTPTPI--P
        MGFSGVR VVIF+LL   C+AQ+P PAP  P         PAPSPV  PP+PTP+PNRAPSP+PTP SPSPAP+APSP P  P+PAP    PTPTPI  P
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTS-TPTPTPI--P

Query:  SPSGSPAGAPVPAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVL
        +PSG P    VP   SPPSP   G+ VPSPAPQ PPADNPAGAAS IG AAT GIALAGTLFAV+L
Subjt:  SPSGSPAGAPVPAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVL

A0A6J1GF55 vegetative cell wall protein gp1-like4.73e-2957.46Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-------------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP---------
        MG SGVR+VVIF+L+A  C AQ+P P P+               PAPSPV FPP+P+ SP RAPSP+PT ASPSPA EAPSP P+A +PAP         
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-------------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP---------

Query:  -TSTPTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
         TS PTP P   P PSGSPAGAPV P   SPPSP+ +G   PSP P+ P AD+PAGAAS IG A T GIA+AGTL A+V+A
Subjt:  -TSTPTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

A0A6J1ITI1 vegetative cell wall protein gp1-like2.33e-3159.89Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP----------TST
        MGFSGVR+VVIF+L+A  C AQ+P PA   P         PAPSPV FPP+P+ SP RAPSP+PT ASPSPA EAPSP P+A +PAP          TS 
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP---------PAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAP----------TST

Query:  PTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
        PTP P   P PSGSPAGAPV P   SPPSP+ +G   PSP P+ P AD+PAGAAS IG A T GIA+AGTL A+V+A
Subjt:  PTPTPI--PSPSGSPAGAPV-PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

A0A6J1KP28 classical arabinogalactan protein 4-like2.15e-2252.56Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAGAPV-
        MGFSGVR +++ +LLAA+C+AQ+P P P    AP+P   P  P P     P+P+ +PASP+PAPE             TSTPTP PI +PSGSPAG PV 
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAGAPV-

Query:  PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA
        P   SPPS A          P+ PPADNP GAASQIGRA T G+A+AG+L AV+LA
Subjt:  PAFPSPPSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA

SwissProt top hitse value%identityAlignment
O10341 Uncharacterized 29.3 kDa protein2.9e-0751.33Show/hide
Query:  LAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPA-SPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAGAPVPAFPSP-PSPAGNGVPVPS
        L+ +P P P+  P PSP    P+PTP+P+  PSP PTP+ +PSP P  PSPTP  PSP P+ TP+PTP PSP+ SP   P P  PSP P+P+    P P 
Subjt:  LAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPA-SPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAGAPVPAFPSP-PSPAGNGVPVPS

Query:  PAPQPPPADNPAG
        P+P PPP+ +P G
Subjt:  PAPQPPPADNPAG

Arabidopsis top hitse value%identityAlignment
AT1G20130.1 GDSL-like Lipase/Acylhydrolase superfamily protein8.9e-0446.96Show/hide
Query:  CLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPA---APSPAPTSTPTPTPIPSPSGSPAGAPVPAFP--SPPSPAGNGV
        C +  P P P  PPAPSP    P P+P P   P P P PA P P P  P P PA    P PAP   P P P PSP   PA  P P  P   PP PA    
Subjt:  CLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPA---APSPAPTSTPTPTPIPSPSGSPAGAPVPAFP--SPPSPAGNGV

Query:  PVPSPAPQPPPADNP
        P P+PAP P PA +P
Subjt:  PVPSPAPQPPPADNP

AT1G20130.2 GDSL-like Lipase/Acylhydrolase superfamily protein8.9e-0446.96Show/hide
Query:  CLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPA---APSPAPTSTPTPTPIPSPSGSPAGAPVPAFP--SPPSPAGNGV
        C +  P P P  PPAPSP    P P+P P   P P P PA P P P  P P PA    P PAP   P P P PSP   PA  P P  P   PP PA    
Subjt:  CLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPA---APSPAPTSTPTPTPIPSPSGSPAGAPVPAFP--SPPSPAGNGV

Query:  PVPSPAPQPPPADNP
        P P+PAP P PA +P
Subjt:  PVPSPAPQPPPADNP

AT5G56330.1 alpha carbonic anhydrase 81.4e-0442.42Show/hide
Query:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-PAPSPVFFPPAPTPSPN-RAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAG-A
        M  S +  V++   ++ + ++ +P P P +P PAP+P    P PTP+P    P P P P  P P P AP+PTP  P PAP  TP P P P P+ +P    
Subjt:  MGFSGVRVVVIFSLLAASCLAQSPGPAPSQP-PAPSPVFFPPAPTPSPN-RAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAG-A

Query:  PVPAFPSPPSPAGNGVPVPSPAPQPPPADNPA
        P PA P+PP P     P P+PAP+P PA  PA
Subjt:  PVPAFPSPPSPAGNGVPVPSPAPQPPPADNPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTCTCCGGCGTTCGAGTGGTTGTTATTTTTTCTTTGTTGGCGGCGTCGTGCTTGGCTCAGTCGCCAGGTCCTGCACCGTCGCAACCTCCGGCGCCTTCT
CCGGTCTTTTTCCCTCCAGCTCCGACTCCATCGCCAAACAGAGCACCATCACCTGCTCCGACTCCGGCATCACCCTCACCTGCTCCGGAAGCTCCTTCGCCGACG
CCGGCAGCACCTTCCCCAGCTCCAACCTCCACTCCTACTCCTACTCCTATTCCTTCGCCTAGTGGATCTCCCGCCGGTGCTCCTGTTCCAGCTTTCCCTTCTCCT
CCTTCACCTGCCGGAAACGGGGTGCCCGTGCCTTCACCAGCTCCCCAACCACCGCCGGCCGACAACCCAGCTGGAGCGGCGTCGCAAATCGGCCGGGCAGCCACA
TTCGGTATCGCTCTGGCCGGAACCCTGTTCGCGGTGGTGTTAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGATTCTCCGGCGTTCGAGTGGTTGTTATTTTTTCTTTGTTGGCGGCGTCGTGCTTGGCTCAGTCGCCAGGTCCTGCACCGTCGCAACCTCCGGCGCCTTCT
CCGGTCTTTTTCCCTCCAGCTCCGACTCCATCGCCAAACAGAGCACCATCACCTGCTCCGACTCCGGCATCACCCTCACCTGCTCCGGAAGCTCCTTCGCCGACG
CCGGCAGCACCTTCCCCAGCTCCAACCTCCACTCCTACTCCTACTCCTATTCCTTCGCCTAGTGGATCTCCCGCCGGTGCTCCTGTTCCAGCTTTCCCTTCTCCT
CCTTCACCTGCCGGAAACGGGGTGCCCGTGCCTTCACCAGCTCCCCAACCACCGCCGGCCGACAACCCAGCTGGAGCGGCGTCGCAAATCGGCCGGGCAGCCACA
TTCGGTATCGCTCTGGCCGGAACCCTGTTCGCGGTGGTGTTAGCGTAG
Protein sequenceShow/hide protein sequence
MGFSGVRVVVIFSLLAASCLAQSPGPAPSQPPAPSPVFFPPAPTPSPNRAPSPAPTPASPSPAPEAPSPTPAAPSPAPTSTPTPTPIPSPSGSPAGAPVPAFPSP
PSPAGNGVPVPSPAPQPPPADNPAGAASQIGRAATFGIALAGTLFAVVLA