; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0006 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0006
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNusB domain-containing protein
Genome locationMC02:142645..148120
RNA-Seq ExpressionMC02g0006
SyntenyMC02g0006
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0031564 - transcription antitermination (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR006027 - NusB/RsmB/TIM44
IPR011605 - NusB antitermination factor
IPR035926 - NusB-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605513.1 hypothetical protein SDJN03_02830, partial [Cucurbita argyrosperma subsp. sororia]3.06e-15983.57Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SS +SGICRFP   SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA
        STWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA

XP_022153810.1 uncharacterized protein LOC111021236 [Momordica charantia]8.11e-212100Show/hide
Query:  MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAAREL
        MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAAREL
Subjt:  MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAAREL

Query:  ALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAV
        ALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAV
Subjt:  ALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAV

Query:  VDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL
        VDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL
Subjt:  VDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL

XP_022948088.1 uncharacterized protein LOC111451776 [Cucurbita moschata]1.86e-16083.93Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SS +SGICRFP   SA VPYVK+SVPHLC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA
        STWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA

XP_023007062.1 uncharacterized protein LOC111499665 [Cucurbita maxima]3.06e-15983.57Show/hide
Query:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SSH+SGIC   FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA
        STWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA

XP_023532267.1 uncharacterized protein LOC111794466 [Cucurbita pepo subsp. pepo]4.35e-15983.21Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SSH+SGICRFP   SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA +LAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA
        STWK KPAGRILEL ILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA

TrEMBL top hitse value%identityAlignment
A0A1S4DXQ5 uncharacterized protein LOC103491638 isoform X24.47e-15783.09Show/hide
Query:  PNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVR
        PNF+ S+HISGIC+FP  AS+ VP+VK+S+P LC QASLRASTSF EN V  E  SIS SS E IPK+DK+G+ CSPRAARELALSIVYAACLEGSDPVR
Subjt:  PNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPVR

Query:  LFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPS
        LFEKRLN+RRE GYEFDK SLM YNHMSFGGPPVTVET EEADELLRKDE+D  IEA ILAAPPKMVYSKLILRF+RKLLVAVVD WDN  LKIE VIP 
Subjt:  LFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPS

Query:  TWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEV
        TWK+KPAGRILELCILHLAMSEITV+GTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDIKE DST AREKQEV
Subjt:  TWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEV

A0A5D3DDJ4 NusB/RsmB/TIM445.14e-15783.15Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ S+HISGIC+FP  AS+ VP+VK+S+P LC QASLRASTSF EN V  E  SIS SS E IPK+DK+G+ CSPRAARELALSIVYAACLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLN+RRE GYEFDK SLM YNHMSFGGPPVTVET EEADELLRKDE+D  IEA ILAAPPKMVYSKLILRF+RKLLVAVVD WDN  LKIE VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEV
         TWK+KPAGRILELCILHLAMSEITV+GTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDIKE DST AREKQEV
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEV

A0A6J1DHW5 uncharacterized protein LOC1110212363.93e-212100Show/hide
Query:  MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAAREL
        MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAAREL
Subjt:  MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAAREL

Query:  ALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAV
        ALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAV
Subjt:  ALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAV

Query:  VDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL
        VDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL
Subjt:  VDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL

A0A6J1G8E0 uncharacterized protein LOC1114517768.98e-16183.93Show/hide
Query:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SS +SGICRFP   SA VPYVK+SVPHLC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGICRFP--ASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA
        STWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA

A0A6J1KXJ4 uncharacterized protein LOC1114996651.48e-15983.57Show/hide
Query:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV
        RPNF+ SSH+SGIC   FP SA VPYVK+SVP LC QASLRASTSF +NSV  ES S+  SS E IPK+DK+GR CSPRAARELALSI+YA+CLEGSDPV
Subjt:  RPNFNLSSHISGIC--RFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACLEGSDPV

Query:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP
        RLFEKRLNAR EPGYEFDK SLM YNHMSFGGPPVTVETAEEADELLRKDEKD AIEA ILAAPPK+VYSKLILRF+RKLLVAVVDRWD+HVLKI+ VIP
Subjt:  RLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIP

Query:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA
        STWK KPAGRILELCILHLAMSEITVVGTR QIVINEA+DLAKRFCDGAAPRIINGCLRTFVKDI+E DST+AR K+ V+
Subjt:  STWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVA

SwissProt top hitse value%identityAlignment
A6QBK6 Transcription antitermination protein NusB6.8e-0537.35Show/hide
Query:  FSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCL
        FS  L    ++  +    +IE  + + W     GR+ E  IL L   EI V  T R I+INEA++LAK   D  +P+ ING L
Subjt:  FSRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCL

A7GWZ7 Transcription antitermination protein NusB8.9e-0538.81Show/hide
Query:  KIENVIPSTWKSKPAGR--ILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCL
        +++ ++    K K   R  I+EL IL L + E+   GT + ++INEAI+LAK     +AP+ ING L
Subjt:  KIENVIPSTWKSKPAGR--ILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCL

B1WXY6 Transcription antitermination protein NusB1.8e-0533.72Show/hide
Query:  LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIK
        L+  ++R    + +    +   W+ K   +I +  IL LA++EI  +    ++ INEA++LAKR+ D    R ING LR F   IK
Subjt:  LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIK

Q18B61 Transcription antitermination protein NusB1.4e-0536.71Show/hide
Query:  DNHVLKIENVIPSTWKSKPAGRI--LELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDI
        +NH  KI+ +I    K+    R+  +++ IL L++ EI  + T  ++ INEA++LAK +CD  +P+ ING L + V +I
Subjt:  DNHVLKIENVIPSTWKSKPAGRI--LELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDI

Q8DKS0 Transcription antitermination protein NusB6.8e-0532.91Show/hide
Query:  LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLR
        L+  + R+ N + ++ N     W+ +   + L+  I+ +A+ E+  +   +Q+ INEAI+LAKR+ D  + R ING LR
Subjt:  LVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLR

Arabidopsis top hitse value%identityAlignment
AT4G26370.1 antitermination NusB domain-containing protein6.6e-8858.03Show/hide
Query:  MEGASLLFCLSCYSSPC-FRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLC
        MEG     CL   S+ C F  N +  SH     R      V  ++ +        + R+S+S L   ++    ++ T   S++E+    +PK+DK+GRL 
Subjt:  MEGASLLFCLSCYSSPC-FRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLC

Query:  SPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRF
        SPRAARELAL I+YAACLEGSDP+RLFEKR+NARREPGYEFDK+SL+ YNHMSFGGPPV  ET EE DEL+R DEK+  IEA +L+APPK+VYSKL+LRF
Subjt:  SPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRF

Query:  SRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYARE-
        ++KLL AVVD+WD+HV+ IE + P  WKS PAGRILE  ILHLAMSE+ V+ TR  IVINEA+DLAKRFCDG+APRIINGCLRTFVKD     +  A E 
Subjt:  SRKLLVAVVDRWDNHVLKIENVIPSTWKSKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYARE-

Query:  KQEVA
        KQEV+
Subjt:  KQEVA

AT4G26370.2 antitermination NusB domain-containing protein6.9e-3749.19Show/hide
Query:  MEGASLLFCLSCYSSPC-FRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLC
        MEG     CL   S+ C F  N +  SH     R      V  ++ +        + R+S+S L   ++    ++ T   S++E+    +PK+DK+GRL 
Subjt:  MEGASLLFCLSCYSSPC-FRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSIST---SSKEI----IPKVDKTGRLC

Query:  SPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAIL
        SPRAARELAL I+YAACLEGSDP+RLFEKR+NARREPGYEFDK+SL+ YNHMSFGGPPV  ET EE DEL+R DEK+  I  +++
Subjt:  SPRAARELALSIVYAACLEGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGAGCCTCCCTTCTCTTCTGCCTATCTTGCTATTCGTCTCCGTGCTTCAGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATATGCCGGTTTCCGGCTAG
CGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTCGCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACTGGAGAGAGCGATTCTA
TTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTTGTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTCAATTGTTTATGCAGCTTGTTTA
GAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGAACCGGGATATGAATTTGACAAGGCATCATTGATGGCATATAATCATATGAGCTTTGG
GGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAAAGATGAAAAGGATTTTGCAATTGAAGCAGCAATCCTTGCGGCCCCACCAAAGATGG
TCTACAGCAAACTCATTTTACGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGGACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCATTCCTTCAACTTGGAAG
AGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCTGAAATAACGGTTGTTGGAACAAGACGTCAGATTGTCATTAACGAGGCCATTGATCT
TGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAGGACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTATGCTCGAGAGAAGCAAG
AAGTAGCCGGTGCACGACTCTGA
mRNA sequenceShow/hide mRNA sequence
CACGACCCCTTGATCGTAAATCTATCAAAACGGGATATGTAGTATAATTTAACTTAAATAATATCAACACGGTATAATCGGCACCGGTCTTCGGTTCTGGTCAGGAGCTC
CAATTTTTCCACCCATTTCTTCTATTAAAAAAAGTTAACCTAAATATTATTAAAAAAATACATGTCAGGAACTTATCTATATAGACTGGGAGCCTCCCACTGCGCGCCTT
ACTAGCAAGAGCTACAATGGAGGGAGCCTCCCTTCTCTTCTGCCTATCTTGCTATTCGTCTCCGTGCTTCAGGCCTAATTTTAATCTATCTTCCCACATTTCTGGAATAT
GCCGGTTTCCGGCTAGCGCAGCCGTTCCGTACGTTAAAGATTCCGTGCCACACCTCTGCGCTCAAGCCTCGCTTCGCGCTTCTACTTCTTTTCTCGAAAATTCTGTGACT
GGAGAGAGCGATTCTATTTCAACTTCTTCCAAAGAAATAATACCCAAGGTCGACAAGACCGGGAGGCTTTGTAGCCCCAGAGCTGCCAGAGAGCTCGCTTTGTCAATTGT
TTATGCAGCTTGTTTAGAAGGCTCCGACCCAGTTCGGCTCTTCGAGAAGCGGTTGAATGCCCGGAGAGAACCGGGATATGAATTTGACAAGGCATCATTGATGGCATATA
ATCATATGAGCTTTGGGGGCCCGCCAGTTACTGTGGAAACAGCTGAAGAGGCAGATGAGCTTTTACGTAAAGATGAAAAGGATTTTGCAATTGAAGCAGCAATCCTTGCG
GCCCCACCAAAGATGGTCTACAGCAAACTCATTTTACGGTTTTCACGCAAACTTTTGGTTGCAGTTGTGGACAGATGGGATAATCACGTGCTTAAAATTGAAAATGTCAT
TCCTTCAACTTGGAAGAGCAAGCCAGCAGGACGGATTCTGGAACTTTGTATTCTTCACCTGGCTATGTCTGAAATAACGGTTGTTGGAACAAGACGTCAGATTGTCATTA
ACGAGGCCATTGATCTTGCAAAACGATTCTGTGATGGAGCAGCCCCTCGTATTATTAATGGGTGCCTAAGGACCTTTGTGAAGGACATTAAAGAAATTGATTCAACTTAT
GCTCGAGAGAAGCAAGAAGTAGCCGGTGCACGACTCTGAACTTTTGGGGTGCCTTAGGAACTTTGGAAGGACATAAAAAAACTTGAGTCAACTCATGCCCAAGAGAAGCA
CGAAGTGCCTCTGAAGTCTGAGCTTTTGGGGGTACGGGGCGGATATTAAACATGTTGCTGTTAACAGCAGTCAAAGTGAAGTGAGTTTAATGATCTCATACTTGGTGCGA
GGATGCCGCAAACCACCAGTAAGGGTTTGCTTTTTCACCTGCAGGCGTGGGGATGTGCTCATTTCTGTTATATTCATAGAGTTGAGTAATAGTTTATGATGTGTGATAGA
ACAAGTTGTCAGATTGATCTAGCATTACATGTTATCATATACGTCCTATATGAACTTACGTTACTTTGAAATTTGAATTTAAAATTGTCTTAAAGATGGTGTTGGCCTGG
TGGATAAGAAATTAGAGGGCACTTCCCTTCCATGAAAAATGTAATTGGAGTATGGAGTTTAAGATGTGTAAATTTATCTAGGAAGGTTGTTCATGCAAAAGACTTCCATT
TTATTGTTGATACATAGCTTGTATGCAGGAAGCATAGCCTTTTTTGTGGTGGTTTTGGGGTGGTAATTAGATGATGTTTATATGGCTCACGGCACGTACGAGCAATTGTC
CATTTTATGACTAATTGAAGAGGGGAT
Protein sequenceShow/hide protein sequence
MEGASLLFCLSCYSSPCFRPNFNLSSHISGICRFPASAAVPYVKDSVPHLCAQASLRASTSFLENSVTGESDSISTSSKEIIPKVDKTGRLCSPRAARELALSIVYAACL
EGSDPVRLFEKRLNARREPGYEFDKASLMAYNHMSFGGPPVTVETAEEADELLRKDEKDFAIEAAILAAPPKMVYSKLILRFSRKLLVAVVDRWDNHVLKIENVIPSTWK
SKPAGRILELCILHLAMSEITVVGTRRQIVINEAIDLAKRFCDGAAPRIINGCLRTFVKDIKEIDSTYAREKQEVAGARL