; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0008 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0008
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionMediator of RNA polymerase II transcription subunit 21
Genome locationMC02:154158..156886
RNA-Seq ExpressionMC02g0008
SyntenyMC02g0008
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016592 - mediator complex (cellular component)
GO:0043078 - polar nucleus (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR021384 - Mediator complex, subunit Med21
IPR037212 - Mediator complex, subunit Med7/Med21-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605829.1 Mediator of RNA polymerase II transcription subunit 21, partial [Cucurbita argyrosperma subsp. sororia]5.84e-8296.38Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTEDSAN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNC+NLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_022153730.1 mediator of RNA polymerase II transcription subunit 21 [Momordica charantia]3.67e-85100Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_022958635.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita moschata]2.89e-8297.1Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTEDSAN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_023532119.1 mediator of RNA polymerase II transcription subunit 21 [Cucurbita pepo subsp. pepo]3.38e-8195.65Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPT+DSAN  EQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

XP_038902781.1 mediator of RNA polymerase II transcription subunit 21-like [Benincasa hispida]1.67e-8196.38Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVN+IAALAFNTFGTLQRDAPPVRLS NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQL+AAEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

TrEMBL top hitse value%identityAlignment
A0A0A0KZ00 Mediator of RNA polymerase II transcription subunit 211.34e-8094.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPPSQEPTED+A IAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
         VGQELQKQL+AAEKEL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A5A7TEZ9 Mediator of RNA polymerase II transcription subunit 211.91e-8094.93Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPPSQEPTEDSA IAEQPKLMSAALVKAAKQFD LVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
         VGQELQKQL+AAE+EL QVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A6J1DHM9 Mediator of RNA polymerase II transcription subunit 211.77e-85100Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A6J1H2M0 Mediator of RNA polymerase II transcription subunit 211.40e-8297.1Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTEDSAN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

A0A6J1K432 Mediator of RNA polymerase II transcription subunit 211.40e-8297.1Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
        MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLS NYPEPP  EPTEDSAN AEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEND

Query:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
Subjt:  AVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

SwissProt top hitse value%identityAlignment
C0LU16 Mediator of RNA polymerase II transcription subunit 213.2e-5078.42Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEP-TEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LS NYPEPP+    T+D+    EQPK +SA LVKAAKQFD LVAALPLS+GGE  QLKRIAELQ EN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEP-TEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN

Query:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        D VGQELQKQLEAAEKELKQVQELF Q ADNCLN+KK +
Subjt:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD

Q2TBU8 Mediator of RNA polymerase II transcription subunit 212.6e-0427.34Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSS-----NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQ
        D ++QLQ+ VN++A    N  G LQ+  PP   S+     N  +P +  PTE+ A      +L +A + + AK  DVL+ +LP  +     Q   + +L+
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSS-----NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQ

Query:  AENDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK
         EN      L+  +   +  L+++Q   + +A + L  +
Subjt:  AENDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK

Q4R6N3 Mediator of RNA polymerase II transcription subunit 217.7e-0427.34Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSS-----NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQ
        D ++QLQ+ VN++A    N  G LQ+  PP   S+     N  +P +  PTE+ A      +L +A + + AK  DVL+ +LP  +     Q   + +L+
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSS-----NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQ

Query:  AENDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK
         EN      L+  +   +  L+++Q   + +A + L  +
Subjt:  AENDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK

Q7ZTI5 Mediator of RNA polymerase II transcription subunit 214.1e-0526.12Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDA
        D ++QLQ+ VN++A    N  G LQ+ APP   S+        +P+  +   A+   L +A + + AK  DVL+ +LP  +     Q   + +L+ EN  
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDA

Query:  VGQELQKQLEAAEKELKQVQELFSQVADNCLNLK
            L++ +   +  L+++Q   + +A + L  +
Subjt:  VGQELQKQLEAAEKELKQVQELFSQVADNCLNLK

Q9CQ39 Mediator of RNA polymerase II transcription subunit 217.7e-0427.34Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSS-----NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQ
        D ++QLQ+ VN++A    N  G LQ+  PP   S+     N  +P +  PTE+ A      +L +A + + AK  DVL+ +LP  +     Q   + +L+
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSS-----NYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQ

Query:  AENDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK
         EN      L+  +   +  L+++Q   + +A + L  +
Subjt:  AENDAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLK

Arabidopsis top hitse value%identityAlignment
AT4G04780.1 mediator 212.3e-5178.42Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEP-TEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LS NYPEPP+    T+D+    EQPK +SA LVKAAKQFD LVAALPLS+GGE  QLKRIAELQ EN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEP-TEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAEN

Query:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD
        D VGQELQKQLEAAEKELKQVQELF Q ADNCLN+KK +
Subjt:  DAVGQELQKQLEAAEKELKQVQELFSQVADNCLNLKKAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATAATTTCCCAACTACAGGAACAAGTTAACACAATTGCAGCTTTAGCTTTCAACACATTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTTATCCTCAAA
TTATCCTGAACCACCGTCTCAGGAACCTACAGAGGACAGTGCAAACATCGCAGAGCAGCCCAAGCTTATGAGTGCCGCTTTGGTCAAAGCTGCTAAGCAGTTTGATGTAT
TGGTCGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAACAGTTGAAAAGGATTGCAGAACTACAGGCTGAGAACGATGCTGTAGGCCAAGAACTTCAAAAGCAGTTG
GAAGCTGCAGAGAAGGAATTAAAACAGGTTCAGGAGCTTTTCAGCCAAGTGGCTGATAATTGCTTAAACTTGAAGAAAGCAGAT
mRNA sequenceShow/hide mRNA sequence
TGATTCTTAACTACTTGATCTTTTAAGAATATTACTCAGCGCCTTACAGCAGCGACGGCACGGCAAACCGTACACCCATCCATCCCTTTTACTGCTACCTCGCCGCCCGT
CGCGCTACCAACTCGCCACCACTTATCCGCTCCACCAGGCAGCCACCATCTCTCGCCGACTTGCTGGGTTTGCTTCGTCGGCACCGGCATCGCATCGGTTGTCTCCGCCC
AAACAGTGATCTCTCTTTCACGCTCATCCCATCGGATAAGGTTCAAGATGGACATAATTTCCCAACTACAGGAACAAGTTAACACAATTGCAGCTTTAGCTTTCAACACA
TTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTTATCCTCAAATTATCCTGAACCACCGTCTCAGGAACCTACAGAGGACAGTGCAAACATCGCAGAGCAGCCCAA
GCTTATGAGTGCCGCTTTGGTCAAAGCTGCTAAGCAGTTTGATGTATTGGTCGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAACAGTTGAAAAGGATTGCAGAAC
TACAGGCTGAGAACGATGCTGTAGGCCAAGAACTTCAAAAGCAGTTGGAAGCTGCAGAGAAGGAATTAAAACAGGTTCAGGAGCTTTTCAGCCAAGTGGCTGATAATTGC
TTAAACTTGAAGAAAGCAGAT
Protein sequenceShow/hide protein sequence
MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSSNYPEPPSQEPTEDSANIAEQPKLMSAALVKAAKQFDVLVAALPLSDGGEEEQLKRIAELQAENDAVGQELQKQL
EAAEKELKQVQELFSQVADNCLNLKKAD