CuGenDBv2

Gene ID	MC02g0031
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Non-structural maintenance of chromosomes element 1 homolog
Genome location	MC02:313122..317474
RNA-Seq Expression	MC02g0031
Synteny	MC02g0031
Gene Ontology terms	GO:0000724 - double-strand break repair via homologous recombination (biological process) GO:0006301 - postreplication repair (biological process) GO:0005634 - nucleus (cellular component) GO:0030915 - Smc5-Smc6 complex (cellular component) GO:0004842 - ubiquitin-protein transferase activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR011513 - Non-structural maintenance of chromosomes element 1 IPR013083 - Zinc finger, RING/FYVE/PHD-type IPR014857 - Zinc finger, RING-like IPR036388 - Winged helix-like DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7035803.1 Non-structural maintenance of chromosomes element 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]

1.62e-196

87.35

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS  VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQSNCAVPWCLD
        PP+TRR+TRSSA   N A+ WC D
Subjt:  PPETRRVTRSSARQSNCAVPWCLD

XP_022153726.1 non-structural maintenance of chromosomes element 1 homolog isoform X1 [Momordica charantia]

4.50e-240

100

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQSNCAVPWCLDYAKICNSLHKI
        RVTRSSARQSNCAVPWCLDYAKICNSLHKI
Subjt:  RVTRSSARQSNCAVPWCLDYAKICNSLHKI

XP_022153728.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Momordica charantia]

3.09e-221

100

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Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQ
        RVTRSSARQ
Subjt:  RVTRSSARQ

XP_022153729.1 non-structural maintenance of chromosomes element 1 homolog isoform X3 [Momordica charantia]

1.70e-221

100

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Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQ
        RVTRSSARQ
Subjt:  RVTRSSARQ

XP_022995424.1 non-structural maintenance of chromosomes element 1 homolog isoform X2 [Cucurbita maxima]

1.12e-195

88.85

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Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS  VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQ
        PP+TRR+TRSSA Q
Subjt:  PPETRRVTRSSARQ

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DI86 Non-structural maintenance of chromosomes element 1 homolog

1.50e-221

100

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Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQ
        RVTRSSARQ
Subjt:  RVTRSSARQ

A0A6J1DJY3 Non-structural maintenance of chromosomes element 1 homolog

8.24e-222

100

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQ
        RVTRSSARQ
Subjt:  RVTRSSARQ

A0A6J1DLJ6 Non-structural maintenance of chromosomes element 1 homolog

2.18e-240

100

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Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
        CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETR

Query:  RVTRSSARQSNCAVPWCLDYAKICNSLHKI
        RVTRSSARQSNCAVPWCLDYAKICNSLHKI
Subjt:  RVTRSSARQSNCAVPWCLDYAKICNSLHKI

A0A6J1JYV1 Non-structural maintenance of chromosomes element 1 homolog

6.04e-196

88.85

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS  VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQ
        PP+TRR+TRSSA Q
Subjt:  PPETRRVTRSSARQ

A0A6J1K5P2 Non-structural maintenance of chromosomes element 1 homolog

5.41e-196

88.85

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        MRELSWRHHTLIQALLARGPLRED FHL+FTRIT KSPDND+QLFNNYLL +NKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGD GSQS  VIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP
        CNEAGVKAELC NEGCTVRVH+YCLKKMLSNKKSKRACP CGT+WRST  N+E KEEEDEPD R QGQSSS +RKK+RLN D+DS  NG     A ASQP
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNG-----ASASQP

Query:  PPETRRVTRSSARQ
        PP+TRR+TRSSA Q
Subjt:  PPETRRVTRSSARQ

SwissProt top hits

e value

%identity

Alignment

Q6P881 Non-structural maintenance of chromosomes element 1 homolog

1.8e-06

22.17

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Query:  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPP
        ++++  +NK L     ++     + DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G    I+ L+L  E Q   M  +       
Subjt:  NNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPP

Query:  AFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCG
                  E+ +    QD+WL    +G   L  R  ++L  +      D+   C VC++  ++ +LC+N  C + +H  C   +     +   CP C 
Subjt:  AFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCG

Query:  TKWRSTVTNMESKEEEDEPDRRTQGQSSSQ
          W   + ++            +QG S SQ
Subjt:  TKWRSTVTNMESKEEEDEPDRRTQGQSSSQ

Q6PAF4 Non-structural maintenance of chromosomes element 1 homolog

1.5e-08

22.86

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Query:  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNC
        DG  YY LVN V ++ +K+ + Y+  ++  ++  +E I    S  G  ++I+ L+L  E Q   M  +                 E+ +    Q++WL  
Subjt:  DGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNC

Query:  TPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQG
          +G   L  R  ++L  + R    D+   C VC +  ++++LC+N  C + +H  C  K   + K+   CP C   W   + ++     +     +T+ 
Subjt:  TPDGFVNLGVRSFLDLRSWFRT--NDIPS-CEVCNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQG

Query:  QSSSQRRKKS
             +R K+
Subjt:  QSSSQRRKKS

Arabidopsis top hits

e value

%identity

Alignment

AT5G21140.1 embryo defective 1379

3.8e-97

56.49

Show/hide

Query:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF
        M  LSW+HHTLIQAL++RGPL+E +FH +FT +TG++P   +++F+ YLL INK LS+  FEL+ CR+QYDG+V YG+VNNV+D+QSKLGTKYSVPQIAF
Subjt:  MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAF

Query:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV
        +K I+EAIAQD +AQG IS+  AL+++LENQ+    S S Q +PPAFKNFS++ KEKT+ EL +D+WL  T +  + LG+RS LDLRSWFR ND+PSCEV
Subjt:  YKAIVEAIAQDPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEV

Query:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPP
        CNEAGVKA+LC  EGC VR+H+YCLKK+LS +  KR C GCG  W  S +T  E+ EE   DE +  TQ  +   +R++ + +   +  S  + AS    
Subjt:  CNEAGVKAELCDNEGCTVRVHQYCLKKMLSNKKSKRACPGCGTKW-RSTVTNMESKEE--EDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPP

Query:  ETRRVTRS
         TRRVTRS
Subjt:  ETRRVTRS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGCGAGAGCTGAGTTGGAGACATCATACTCTCATTCAAGCGCTACTCGCACGCGGCCCACTAAGAGAGGATCAGTTTCATTTGATGTTTACGCGCATCACTGGAAAGAG
CCCAGATAATGACCAGCAGCTGTTTAATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGACGGTCGTG
TTTATTATGGCTTGGTCAATAATGTATCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATTGCCTTCTACAAAGCCATTGTTGAAGCAATTGCACAA
GATCCATCTGCTCAAGGAGGAATATCCAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTT
CAAGAATTTCTCAATATCTCTCAAGGAAAAAACAATTGCTGAGCTTGCACAGGATCAGTGGCTTAACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTC
TTGATCTGCGAAGTTGGTTCCGCACTAATGATATACCTTCATGCGAAGTGTGCAACGAGGCTGGAGTGAAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTA
CATCAGTATTGCCTTAAGAAAATGTTATCCAATAAAAAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGA
AGAGGATGAGCCAGATAGGCGCACTCAAGGCCAGTCATCATCACAGAGAAGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCC
AACCTCCTCCAGAGACAAGGAGAGTAACGCGAAGTTCTGCCCGCCAGAGTAACTGTGCTGTTCCATGGTGTCTGGATTATGCAAAGATATGCAATTCACTGCACAAAATT
TGA

mRNA sequence

Show/hide mRNA sequence

ATTAACACGGAGGTTAATTATCTAAAAATCGAAATCACGAGTCATTTTGAAAAGTAACCCTGTAAAAGTTCCATTCCGAAACCAAAAACTTCACAGAATAATATTTATCG
TTAAATGGCAATCTTTCCCGCCTTTTGAAAGCGGCTCTCGTTCGCGGAACTTCACTGCCGGTTGACCCTGAATTAGGGTTCAAAATGCGAGAGCTGAGTTGGAGACATCA
TACTCTCATTCAAGCGCTACTCGCACGCGGCCCACTAAGAGAGGATCAGTTTCATTTGATGTTTACGCGCATCACTGGAAAGAGCCCAGATAATGACCAGCAGCTGTTTA
ATAATTACCTCCTGGCGATAAATAAAGCACTTTCTTTTGCTCAGTTTGAGTTGAGAGGCTGCAGAAACCAATATGACGGTCGTGTTTATTATGGCTTGGTCAATAATGTA
TCTGACGAGCAATCCAAACTGGGAACAAAATATTCAGTTCCACAGATTGCCTTCTACAAAGCCATTGTTGAAGCAATTGCACAAGATCCATCTGCTCAAGGAGGAATATC
CAACATTGCTGCTCTTCATCTGCAGTTGGAAAATCAGCTGGGGGATATGGGGTCCCAGTCGTCTCAAGTCATCCCACCTGCTTTCAAGAATTTCTCAATATCTCTCAAGG
AAAAAACAATTGCTGAGCTTGCACAGGATCAGTGGCTTAACTGCACTCCTGATGGTTTTGTAAATCTGGGTGTCAGATCGTTTCTTGATCTGCGAAGTTGGTTCCGCACT
AATGATATACCTTCATGCGAAGTGTGCAACGAGGCTGGAGTGAAGGCAGAGTTGTGCGATAATGAAGGTTGCACTGTCCGTGTACATCAGTATTGCCTTAAGAAAATGTT
ATCCAATAAAAAGAGTAAAAGGGCTTGCCCAGGTTGTGGCACTAAATGGCGATCTACAGTAACCAATATGGAGTCCAAGGAAGAAGAGGATGAGCCAGATAGGCGCACTC
AAGGCCAGTCATCATCACAGAGAAGGAAGAAATCTAGATTGAACATAGACATGGATTCAGATTCAAATGGAGCCAGTGCTTCCCAACCTCCTCCAGAGACAAGGAGAGTA
ACGCGAAGTTCTGCCCGCCAGAGTAACTGTGCTGTTCCATGGTGTCTGGATTATGCAAAGATATGCAATTCACTGCACAAAATTTGAC

Protein sequence

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MRELSWRHHTLIQALLARGPLREDQFHLMFTRITGKSPDNDQQLFNNYLLAINKALSFAQFELRGCRNQYDGRVYYGLVNNVSDEQSKLGTKYSVPQIAFYKAIVEAIAQ
DPSAQGGISNIAALHLQLENQLGDMGSQSSQVIPPAFKNFSISLKEKTIAELAQDQWLNCTPDGFVNLGVRSFLDLRSWFRTNDIPSCEVCNEAGVKAELCDNEGCTVRV
HQYCLKKMLSNKKSKRACPGCGTKWRSTVTNMESKEEEDEPDRRTQGQSSSQRRKKSRLNIDMDSDSNGASASQPPPETRRVTRSSARQSNCAVPWCLDYAKICNSLHKI

MC02g0031 (gene) of Bitter gourd (Dali-11) v1 genome