; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0179 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0179
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationMC02:1736287..1737075
RNA-Seq ExpressionMC02g0179
SyntenyMC02g0179
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035921.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]7.23e-15382.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+RP  A  PSR  PSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

XP_022957732.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]1.17e-15382.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+RP  A  PSR  PSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

XP_022995114.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]9.90e-15382.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI  L  R+PF+SMDTEFPGVV+RP  A  PSR  PSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

XP_023534188.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita pepo subsp. pepo]6.50e-15382.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+RP  A  PSR  PSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

XP_038901771.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]1.24e-15684.03Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIRQVWDFNL+YEF+LI  L HRFPF+SMDTEFPGVV+RP  A    R RPSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT N FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSI+LLKRQGIDF+RN   GV S+RFA LLMSSGLLCNDSV+WVTFHSAYDFGYLVKILTR  LPARLHDFLKILR  FGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCD LYGGLDRVAKTL +DRAVGK HQAGSDSLLTW AFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

TrEMBL top hitse value%identityAlignment
A0A067JTU3 Poly(A)-specific ribonuclease2.13e-14876.12Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEF
        I IR+VW  NLE EF LI +L   FPF+SMDTEFPG+V RP  + DP++     RRPSDHY++LKSNVD LNLIQVGLTLSD++GNLP LGT + FIWEF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEF

Query:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV
        NFRDFD++RDAHAPDSI+LL+RQGIDF+RN ++GVDS RFA L+MSSGL+CNDSVSWVTFHSAYDFGYLVKILT R LPA L DFL+++R+FFG++VYD+
Subjt:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV

Query:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        KH+MRFC+SLYGGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQKMR VYFV DGPEKHAGVLYGLE
Subjt:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

A0A2C9V215 Poly(A)-specific ribonuclease8.58e-14976.87Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEF
        I IR+VW  NLE EF LI  L   FPF+SMDTEFPG+V RP  + DP++     RRPSDHY++LKSNVD LNLIQVGLTLSD++GNLP LGT N FIWEF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSR-----RRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEF

Query:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV
        NFRDFD++RDAHAPDSIDLL+RQGIDF+RN  +GVDS  FA L+MSSGL+CNDSVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR+FFG +VYD+
Subjt:  NFRDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDV

Query:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        KHMMRFCDSLYGGLDRVA+TL+++RAVGKCHQAGSDSLLTWHAFQ+MR VYFVKDGPEKHAGVLYGLE
Subjt:  KHMMRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

A0A6J1GZY2 Poly(A)-specific ribonuclease5.65e-15482.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI +L  R+PF+SMDTEFPGVV+RP  A  PSR  PSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

A0A6J1K4S7 Poly(A)-specific ribonuclease4.79e-15382.51Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I +R+VWDFNL +EF LI  L  R+PF+SMDTEFPGVV+RP  A  PSR  PSDHY LLKSNVD LNLIQVGLTLSDA GNLPTLGT   FIWEFNFRDF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        D+ RD HAPDSIDLLKRQGIDF+RN   GVDSARF+ LLMSSGLLCN SVSWVTFHSAYDFGYLVKILTRR LP+RL +FLKIL+ FFGNKVYDVKHMMR
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        FCDSLYGGL+RVAKTL +DRAVGKCHQAGSDSLLTWHAFQKMR VYF KDGPEKHAGVLYGLE
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

A0A6P3Z4L2 Poly(A)-specific ribonuclease6.15e-15178.11Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRR--PSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFR
        I IR+VW  NLE EF LI  L   FPF+SMDTEFPG+V RP P  DP+ RR  PSDHY LLKSNVD LNLIQVGLTLSD+ GNLP LG+ N FIWEFNF 
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRR--PSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFR

Query:  DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHM
        DFD++RDAHAPDSIDLL+RQGIDF RN  +G+DS RFA L+MSSGL+CND+VSWVTFHSAYDFGYLVKILTRR+LP R+ +FL++LR+FFGN+VYD+KHM
Subjt:  DFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHM

Query:  MRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        MRFC SLYGGLDRVA+TLE+DRAVGKCHQAGSDSLLTWHAFQKMR VYFV DGPEKHAGVLYGLE
Subjt:  MRFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 115.6e-10469.66Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF
        I IR VW +NLE EF LI  +   +PF+SMDTEFPGV+ +     D  RR  P+  Y LLKSNVD L+LIQVGLTLSDA GNLP LG      +IWEFNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD+ RD HAPDSI+LL+R GIDF+RN ++GV+S RFA L+MSSGL+CN+SVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR FFG++VYDVKH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        +MRFC+  LYGGLDRVA++LE++RAVGKCHQAGSDSLLTW AFQ+MR +YFV+DG EKHAGVLYGLE
Subjt:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

Q9LEU4 Probable CCR4-associated factor 1 homolog 109.0e-7853.44Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        I IR+VWD+NL  EF+LI ++  +F +++MDTEFPGVVL+P       +     +YR LK NVD+L LIQVGLT SD +GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        ++  D +A +SI+LL++ GIDF++N + G+D  RF  L+MSSG++ ND++SWVTFH  YDFGYLVK+LT + LP +  DF K+L ++F   VYD+KH+M 
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGL
        FC+ L+GGL+R+A+ + ++R VG CHQAGSDSLLT  +F+K++  YF     EK+ GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGL

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.6e-10669.58Show/hide
Query:  RQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFNFRDFD
        R+VW  NLE EF LI+++   +PF+SMDTEFPGV+ +    +D     P D Y LLK+NVD L+LIQVGLTLSD +GNLP LG      FIWEFNFRDFD
Subjt:  RQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFNFRDFD

Query:  LARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRF
        +ARDAHAPDSI+LL+RQGIDF+RN +DGV+S RFA L+MSSGL+CN+ VSWVTFHSAYDFGYL+KILTRR LP  L +F +++R+ FG +VYDVKHMM+F
Subjt:  LARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRF

Query:  CD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        C+  L+GGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQ+MR +YFV+DGPEKHAGVLYGLE
Subjt:  CD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

Q9SAI2 Probable CCR4-associated factor 1 homolog 64.0e-7855.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++  +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 76.9e-7854.37Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAF-IWEFNFRD
        IQIR+VW+ NLE E +LI ++   FPFV+MDTEFPG+V RP       +     HY  LK+NV++L +IQ+GLT SD  GNLPT GT N + IW+FNFR+
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAF-IWEFNFRD

Query:  FDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMM
        FDL  D +A DSI+LL++ GIDF +N + G+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP     F +++ ++F  +VYD+KH+M
Subjt:  FDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMM

Query:  RFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGL
        +FC+SL+GGL+++A+ L+++R VG CHQAGSDSLLT   F+K++  +F+    EK++GVLYGL
Subjt:  RFCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGL

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-7955.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++  +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-7955.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++  +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-7955.13Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF
        IQIR+VW+ NL+ E  LI  +   FP+V+MDTEFPG+V+RP       +     HY  LK+NV++L +IQ+GLT S+  GNLPT GT    IW+FNFR+F
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDF

Query:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR
        DL  D  A DSI+LLK+ GID  +N  DG+DS RFA LLMSSG++ N++V WVTFHS YDFGYL+K+LT +NLP    DF K++ ++F   VYD+KH+M+
Subjt:  DLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMR

Query:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL
        FC+SL+GGL+++A+ LE++R VG CHQAGSDSLLT   F+K++  +FV  GP  K++GVLYGL
Subjt:  FCDSLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGP-EKHAGVLYGL

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-10769.58Show/hide
Query:  RQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFNFRDFD
        R+VW  NLE EF LI+++   +PF+SMDTEFPGV+ +    +D     P D Y LLK+NVD L+LIQVGLTLSD +GNLP LG      FIWEFNFRDFD
Subjt:  RQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTP--NAFIWEFNFRDFD

Query:  LARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRF
        +ARDAHAPDSI+LL+RQGIDF+RN +DGV+S RFA L+MSSGL+CN+ VSWVTFHSAYDFGYL+KILTRR LP  L +F +++R+ FG +VYDVKHMM+F
Subjt:  LARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRF

Query:  CD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        C+  L+GGLDRVA+TLE++RAVGKCHQAGSDSLLTWHAFQ+MR +YFV+DGPEKHAGVLYGLE
Subjt:  CD-SLYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-10569.66Show/hide
Query:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF
        I IR VW +NLE EF LI  +   +PF+SMDTEFPGV+ +     D  RR  P+  Y LLKSNVD L+LIQVGLTLSDA GNLP LG      +IWEFNF
Subjt:  IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRR-RPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLG--TPNAFIWEFNF

Query:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH
        RDFD+ RD HAPDSI+LL+R GIDF+RN ++GV+S RFA L+MSSGL+CN+SVSWVTFHSAYDFGYLVKILTRR LP  L +FL +LR FFG++VYDVKH
Subjt:  RDFDLARDAHAPDSIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKH

Query:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE
        +MRFC+  LYGGLDRVA++LE++RAVGKCHQAGSDSLLTW AFQ+MR +YFV+DG EKHAGVLYGLE
Subjt:  MMRFCDS-LYGGLDRVAKTLELDRAVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCCAGATCCGTCAGGTTTGGGATTTCAATCTGGAATACGAATTCAGCCTCATCGCTCAACTCAACCATCGATTCCCTTTCGTTTCCATGGATACGGAGTTTCCCGGCGT
CGTCCTCCGCCCTGGCCCTGCCGCCGATCCATCTCGCCGACGCCCCTCCGACCACTACCGTCTCCTCAAGTCAAACGTCGACGTTTTGAACCTTATCCAGGTCGGCCTCA
CCCTCTCCGACGCCCACGGTAACCTCCCCACTCTCGGTACCCCCAACGCCTTCATTTGGGAGTTCAACTTCAGGGATTTCGACTTGGCCCGTGACGCCCACGCTCCCGAT
TCCATCGACCTCTTGAAACGCCAGGGGATCGACTTCCAACGGAACGCCAAGGACGGCGTCGACTCGGCCCGGTTCGCCCACTTGCTCATGTCATCCGGTCTTCTCTGTAA
CGACTCCGTCAGCTGGGTCACGTTTCACAGCGCCTACGATTTCGGGTACCTGGTCAAGATCCTCACCCGCCGGAACTTGCCGGCTCGCCTCCACGACTTCTTGAAAATTC
TCAGGCTCTTTTTCGGAAACAAAGTTTACGACGTCAAGCACATGATGCGGTTCTGTGATTCCCTCTACGGCGGCTTGGACCGGGTCGCCAAGACCCTTGAGCTGGACCGC
GCGGTTGGGAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTGACCTGGCATGCCTTTCAGAAAATGAGGTATGTGTATTTTGTAAAGGATGGGCCGGAGAAGCACGCCGG
CGTCTTGTATGGATTAGAG
mRNA sequenceShow/hide mRNA sequence
ATCCAGATCCGTCAGGTTTGGGATTTCAATCTGGAATACGAATTCAGCCTCATCGCTCAACTCAACCATCGATTCCCTTTCGTTTCCATGGATACGGAGTTTCCCGGCGT
CGTCCTCCGCCCTGGCCCTGCCGCCGATCCATCTCGCCGACGCCCCTCCGACCACTACCGTCTCCTCAAGTCAAACGTCGACGTTTTGAACCTTATCCAGGTCGGCCTCA
CCCTCTCCGACGCCCACGGTAACCTCCCCACTCTCGGTACCCCCAACGCCTTCATTTGGGAGTTCAACTTCAGGGATTTCGACTTGGCCCGTGACGCCCACGCTCCCGAT
TCCATCGACCTCTTGAAACGCCAGGGGATCGACTTCCAACGGAACGCCAAGGACGGCGTCGACTCGGCCCGGTTCGCCCACTTGCTCATGTCATCCGGTCTTCTCTGTAA
CGACTCCGTCAGCTGGGTCACGTTTCACAGCGCCTACGATTTCGGGTACCTGGTCAAGATCCTCACCCGCCGGAACTTGCCGGCTCGCCTCCACGACTTCTTGAAAATTC
TCAGGCTCTTTTTCGGAAACAAAGTTTACGACGTCAAGCACATGATGCGGTTCTGTGATTCCCTCTACGGCGGCTTGGACCGGGTCGCCAAGACCCTTGAGCTGGACCGC
GCGGTTGGGAAGTGCCACCAGGCCGGTTCTGATAGCCTGCTGACCTGGCATGCCTTTCAGAAAATGAGGTATGTGTATTTTGTAAAGGATGGGCCGGAGAAGCACGCCGG
CGTCTTGTATGGATTAGAG
Protein sequenceShow/hide protein sequence
IQIRQVWDFNLEYEFSLIAQLNHRFPFVSMDTEFPGVVLRPGPAADPSRRRPSDHYRLLKSNVDVLNLIQVGLTLSDAHGNLPTLGTPNAFIWEFNFRDFDLARDAHAPD
SIDLLKRQGIDFQRNAKDGVDSARFAHLLMSSGLLCNDSVSWVTFHSAYDFGYLVKILTRRNLPARLHDFLKILRLFFGNKVYDVKHMMRFCDSLYGGLDRVAKTLELDR
AVGKCHQAGSDSLLTWHAFQKMRYVYFVKDGPEKHAGVLYGLE