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MC02g0180 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0180
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S15, chloroplastic
Genome locationMC02:1749288..1749392
RNA-Seq ExpressionMC02g0180
SyntenyMC02g0180
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005290 - Ribosomal protein S15, bacterial-type
IPR009068 - S15/NS1, RNA-binding


Homology Show/hide homology
GenBank top hitse value%identityAlignment
YP_009456119.1 ribosomal protein S15 [Momordica charantia]1.36e-1397.14Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
YP_009639868.1 ribosomal protein S15 [Lawsonia inermis]3.89e-1394.29Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN+GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
YP_009659805.1 ribosomal protein S15 [Lythrum salicaria]3.89e-1394.29Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN+GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
YP_009660400.1 ribosomal protein S15 [Woodfordia fruticosa]3.89e-1394.29Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN+GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
YP_009752976.1 ribosomal protein S15 [Momordica sessilifolia]1.23e-1397.14Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
TrEMBL top hitse value%identityAlignment
A0A2I6C069 30S ribosomal protein S15, chloroplastic6.58e-1497.14Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
A0A4P8VRJ3 30S ribosomal protein S15, chloroplastic1.88e-1394.29Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN+GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
A0A4P8VS06 30S ribosomal protein S15, chloroplastic1.88e-1394.29Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN+GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
A0A4P8VS46 30S ribosomal protein S15, chloroplastic1.88e-1394.29Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN+GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
A0A6H0EUR0 30S ribosomal protein S15, chloroplastic5.94e-1497.14Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
SwissProt top hitse value%identityAlignment
A6MMQ6 30S ribosomal protein S15, chloroplastic1.2e-0988.57Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVI +EEK+EN GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Q09FY9 30S ribosomal protein S15, chloroplastic2.0e-0985.71Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEK+EN GS EFQVF+FTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Q14FA1 30S ribosomal protein S15, chloroplastic2.6e-0982.86Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        S+IS+E+KKEN GSVEFQ+ SFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Q3V4X7 30S ribosomal protein S15, chloroplastic2.6e-0985.71Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        S+I +EEK+EN GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Q4VZL1 30S ribosomal protein S15, chloroplastic5.3e-1091.43Show/hide
Query:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
        SVIS+EEKKEN GSVEFQV SFTNKIRRLTSHLEL
Subjt:  SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL
Arabidopsis top hitse value%identityAlignment
ATCG01120.1 chloroplast ribosomal protein S151.3e-0885.71Show/hide
Query:  VISREEKKENA-GSVEFQVFSFTNKIRRLTSHLEL
        VIS EE+KE + GSVEFQVFSFTNKIRRLTSHLEL
Subjt:  VISREEKKENA-GSVEFQVFSFTNKIRRLTSHLEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCAGTTATTTCGCGAGAAGAAAAAAAAGAAAATGCAGGATCTGTTGAATTTCAAGTATTCAGTTTCACCAATAAGATACGAAGACTTACTTCACATTTGGAATTG
mRNA sequenceShow/hide mRNA sequence
TCAGTTATTTCGCGAGAAGAAAAAAAAGAAAATGCAGGATCTGTTGAATTTCAAGTATTCAGTTTCACCAATAAGATACGAAGACTTACTTCACATTTGGAATTG
Protein sequenceShow/hide protein sequence
SVISREEKKENAGSVEFQVFSFTNKIRRLTSHLEL