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MC02g0253 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0253
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S12, chloroplastic
Genome locationMC02:2357725..2358154
RNA-Seq ExpressionMC02g0253
SyntenyMC02g0253
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAV44205.1 unknow protein [Oryza sativa Japonica Group]2.84e-2978.31Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+                F+LHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

EPS74505.1 hypothetical protein M569_00222, partial [Genlisea aurea]3.88e-3079.52Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+                FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

GFP97095.1 hypothetical protein PHJA_001853600 [Phtheirospermum japonicum]5.19e-3290.41Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ------SFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ      +FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ------SFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

GFQ00420.1 hypothetical protein PHJA_002186000, partial [Phtheirospermum japonicum]8.79e-2882.19Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ------SFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLY QS RITL SSVLPRLLAQ      +FYLH ALL QAF+HCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ------SFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

KAG6621723.1 hypothetical protein I3842_Q013700, partial [Carya illinoinensis]4.00e-2786.57Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASS        +FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

TrEMBL top hitse value%identityAlignment
A0A2K1Y5K5 Uncharacterized protein (Fragment)5.41e-2786.57Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASS        +FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

A0A5D2YND6 Uncharacterized protein (Fragment)5.01e-2786.57Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASS        +FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

M1DBW2 30S ribosomal protein S12, chloroplastic1.42e-2979.52Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+                FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

Q5W7C9 Unknow protein1.38e-2978.31Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+                F+LHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

S8D511 Uncharacterized protein (Fragment)1.88e-3079.52Show/hide
Query:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
        DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQ+                FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP
Subjt:  DLTADLKSHLQTLYAQSFRITLASSVLPRLLAQS----------------FYLHAALLRQAFAHCGKFPTAASRRSLGRVSVP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACC
GTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTG
CATCCTCTGTATTACCGCGGCTGCTGGCACAGAGCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGG
AGTCTGGGCCGTGTCTCAGTCCCA
mRNA sequenceShow/hide mRNA sequence
CTTTCGTCTCTCAGTGTCAGTGTCGGCCCAGCAGAGTGCTTTCGCCGTTGGTGTTCTTTCCGATCTCTACGCATTTCACCGCTCCACCGGAAATTCCCTCTGCCCCTACC
GTACTCCAGCTTGGTAGTTTCCACCGCCTGTCCAGGGTTGAGCGATTTGACGGCGGACTTAAAAAGCCACCTACAGACGCTTTACGCCCAATCATTCCGGATAACGCTTG
CATCCTCTGTATTACCGCGGCTGCTGGCACAGAGCTTCTACCTCCACGCGGCATTGCTCCGTCAGGCTTTCGCCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGG
AGTCTGGGCCGTGTCTCAGTCCCA
Protein sequenceShow/hide protein sequence
LSSLSVSVGPAECFRRWCSFRSLRISPLHRKFPLPLPYSSLVVSTACPGLSDLTADLKSHLQTLYAQSFRITLASSVLPRLLAQSFYLHAALLRQAFAHCGKFPTAASRR
SLGRVSVP