CuGenDBv2

Gene ID	MC02g0291
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L12
Genome location	MC02:2661610..2661899
RNA-Seq Expression	MC02g0291
Synteny	MC02g0291
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0070180 - large ribosomal subunit rRNA binding (molecular function)
InterPro domains	IPR000911 - Ribosomal protein L11/L12 IPR020783 - Ribosomal protein L11, C-terminal IPR036769 - Ribosomal protein L11, C-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAE9587950.1 putative ribosomal protein L11/L12 [Lupinus albus]

7.69e-45

76.42

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS TVKEI  TCVSVGCTVDG DPKDLQQEI DGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VE+ +D
Subjt:  VEISRD

XP_004137822.1 60S ribosomal protein L12-1 [Cucumis sativus]

5.42e-45

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS +VKEI  TCVSVGCTVDG DPKDLQQEISDGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEI +D
Subjt:  VEISRD

XP_022935531.1 60S ribosomal protein L12-1-like [Cucurbita moschata]

5.42e-45

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS +VKEI  TCVSVGCTVDG DPKDLQQEISDGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEI +D
Subjt:  VEISRD

XP_034702982.1 60S ribosomal protein L12-like [Vitis riparia]

9.41e-46

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS TVKEI  TCVSVGCTVDGNDPKDLQQEI+DGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VE+  D
Subjt:  VEISRD

XP_042954357.1 60S ribosomal protein L12-like [Carya illinoinensis]

5.42e-45

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+A++MR RSMAKDLS TVKEI  TCVSVGCTVDG DPKDLQQEI+DGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEIS D
Subjt:  VEISRD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAX8 Uncharacterized protein

2.62e-45

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS +VKEI  TCVSVGCTVDG DPKDLQQEISDGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEI +D
Subjt:  VEISRD

A0A6A5N6A4 Putative ribosomal protein L11/L12

3.72e-45

76.42

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS TVKEI  TCVSVGCTVDG DPKDLQQEI DGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VE+ +D
Subjt:  VEISRD

A0A6J1F4X7 60S ribosomal protein L12-1-like

2.62e-45

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS +VKEI  TCVSVGCTVDG DPKDLQQEISDGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEI +D
Subjt:  VEISRD

A0A6J1J2K8 60S ribosomal protein L12-1-like

2.62e-45

77.36

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS +VKEI  TCVSVGCTVDG DPKDLQQEISDGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEI +D
Subjt:  VEISRD

A5C9G0 Uncharacterized protein

3.72e-45

76.42

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKHNGN+SLD+VIE+AR+MR RSMAKDLS TVKEI  TCVSVGCTVDG DPKDLQQEI+DGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VE+  D
Subjt:  VEISRD

SwissProt top hits

e value

%identity

Alignment

O50003 60S ribosomal protein L12

4.2e-33

72.64

Show/hide

Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKVSVVPS++          ERDRKKTKNIKH+G++SLD+VIE+A+IM+ RSMAK+L+ TVKEI  TCVSVGCTVDG DPKDLQQEI+DGD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        VEI  D
Subjt:  VEISRD

P0CT83 60S ribosomal protein L12-A

1.7e-26

60.38

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLT+QNRQA VSVVPS+S           RDRKK KN+ H+GNVSLDE+IE+AR MR +S+AK+LS TVKEI  T  SVGCTVDG +P D+Q+EI +G+
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        +EI ++
Subjt:  VEISRD

P50883 60S ribosomal protein L12-1

1.4e-31

70.87

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKV+VVPS++          ERDRKK KNIKHNGN+S D+V E+ARIMR RS+AK+LS TV+EI  TCVSVGCTVDG DPKD+QQEI DG+
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEI
        VEI
Subjt:  VEI

Q9FF52 60S ribosomal protein L12-3

1.8e-31

67.92

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKV+VVPS++          ERDRKK KNIKHNGN+S D+VIE+A+IMR RS+AK+LS TVKEI  TCVSVGCTVDG DPKDLQ+EI+ GD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        ++I  +
Subjt:  VEISRD

Q9LFH5 60S ribosomal protein L12-2

3.0e-31

69.9

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Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKV+VVPS++          ERDRKK KNIKHNGN+S D+V E+ARIMR RS+AK+LS TV+EI  TCVSVGCTVDG DPKDLQQEI +G+
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEI
        +EI
Subjt:  VEI

Arabidopsis top hits

e value

%identity

Alignment

AT2G37190.1 Ribosomal protein L11 family protein

9.6e-33

70.87

Show/hide

Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKV+VVPS++          ERDRKK KNIKHNGN+S D+V E+ARIMR RS+AK+LS TV+EI  TCVSVGCTVDG DPKD+QQEI DG+
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEI
        VEI
Subjt:  VEI

AT3G53430.1 Ribosomal protein L11 family protein

2.1e-32

69.9

Show/hide

Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKV+VVPS++          ERDRKK KNIKHNGN+S D+V E+ARIMR RS+AK+LS TV+EI  TCVSVGCTVDG DPKDLQQEI +G+
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEI
        +EI
Subjt:  VEI

AT5G60670.1 Ribosomal protein L11 family protein

1.3e-32

67.92

Show/hide

Query:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD
        VKLTVQNRQAKV+VVPS++          ERDRKK KNIKHNGN+S D+VIE+A+IMR RS+AK+LS TVKEI  TCVSVGCTVDG DPKDLQ+EI+ GD
Subjt:  VKLTVQNRQAKVSVVPSSS----------ERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGD

Query:  VEISRD
        ++I  +
Subjt:  VEISRD

Sequences

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CDS sequence

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GTCAAGCTCACGGTCCAGAATCGTCAAGCGAAGGTGTCGGTGGTGCCCTCTTCATCAGAGCGCGACCGGAAGAAGACGAAAAATATTAAGCACAACGGAAACGTTTCGCT
AGACGAAGTGATCGAGATGGCGAGGATCATGCGGCTAAGATCGATGGCGAAGGATTTGTCAGATACAGTGAAGGAGATTTCGGCAACTTGTGTATCGGTTGGGTGCACCG
TTGACGGGAATGATCCAAAAGACCTGCAGCAAGAGATCAGTGACGGCGATGTTGAAATCTCTCGGGAT

mRNA sequence

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Protein sequence

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VKLTVQNRQAKVSVVPSSSERDRKKTKNIKHNGNVSLDEVIEMARIMRLRSMAKDLSDTVKEISATCVSVGCTVDGNDPKDLQQEISDGDVEISRD

MC02g0291 (gene) of Bitter gourd (Dali-11) v1 genome