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MC02g0369 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0369
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRING-H2 finger protein ATL64
Genome locationMC02:3220237..3220395
RNA-Seq ExpressionMC02g0369
SyntenyMC02g0369
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010790.1 RING-H2 finger protein ATL18, partial [Cucurbita argyrosperma subsp. argyrosperma]8.13e-2477.36Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D   E+E MCSICLTEFAR+DSV +LPDCAHVFH +CIEKW ERN FTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

XP_022140627.1 RING-H2 finger protein ATL64 [Momordica charantia]5.99e-34100Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

XP_022944066.1 RING-H2 finger protein ATL18-like [Cucurbita moschata]2.01e-2479.25Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D  AE+E MCSICLTEFAR+DSV +LPDCAHVFH +CIEKW ERN FTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

XP_023512248.1 RING-H2 finger protein ATL18-like [Cucurbita pepo subsp. pepo]8.13e-2477.36Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D   E+E MCSICLTEFAR+DSV +LPDCAHVFH +CIEKW ERN FTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

XP_038902378.1 probable E3 ubiquitin-protein ligase RHA4A [Benincasa hispida]1.09e-2373.58Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D   ++E +CSICL EFAR+DSVYELPDC HV+H NCIEKW+ERN FTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

TrEMBL top hitse value%identityAlignment
A0A6J1CHK3 RING-H2 finger protein ATL642.90e-34100Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

A0A6J1FTE6 RING-H2 finger protein ATL18-like9.75e-2579.25Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D  AE+E MCSICLTEFAR+DSV +LPDCAHVFH +CIEKW ERN FTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

A0A6J1G855 E3 ubiquitin-protein ligase ATL41-like2.55e-2073.58Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D  AE+E+ CSICL EFAR DSV  LPDC+HVFH +CIEKW+ERN FTCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

A0A6J1I5X8 RING-H2 finger protein ATL184.39e-1974Show/hide
Query:  AEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        AE+E+ CSICL EFAR DSV  L DC+HVFH +CIEKW+ERN FTCPLCR
Subjt:  AEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

A0A7J9GN90 RING-type domain-containing protein4.52e-1864Show/hide
Query:  AEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        A +E +CSICL EF   D+V ++  C HVFH+NCIEKWMER +FTCPLCR
Subjt:  AEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

SwissProt top hitse value%identityAlignment
Q8L9T5 RING-H2 finger protein ATL21.8e-0943.4Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D T +D + C++CL+EF   ++   LP+C H FH++CI+ W   ++ TCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9FL07 RING-H2 finger protein ATL464.3e-1147.17Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        +G A++   C++CL EF+ +D +  LP C+H FH+NCI+ W++ N+ TCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9LSW9 RING-H2 finger protein ATL161.8e-0944.64Show/hide
Query:  DGTAEDEVM---CSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        +G  E+E     CS+CL+EF  ++ +  +P+C+H+FHI+CI+ W++ NN  CPLCR
Subjt:  DGTAEDEVM---CSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9SLC3 E3 ubiquitin-protein ligase ATL412.3e-0941.51Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        DG A     C++CL+    QD   ELP+C H+FH++C++ W+   + TCP+CR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Q9SZL4 RING-H2 finger protein ATL182.4e-1458.49Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D   E+E+ C ICL EF  +D+V  LP CAH+FHINCIE W+ R + TCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

Arabidopsis top hitse value%identityAlignment
AT2G42360.1 RING/U-box superfamily protein1.7e-1041.51Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        DG A     C++CL+    QD   ELP+C H+FH++C++ W+   + TCP+CR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT3G16720.1 TOXICOS EN LEVADURA 21.3e-1043.4Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D T +D + C++CL+EF   ++   LP+C H FH++CI+ W   ++ TCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT4G38140.1 RING/U-box superfamily protein1.7e-1558.49Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        D   E+E+ C ICL EF  +D+V  LP CAH+FHINCIE W+ R + TCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT5G40250.1 RING/U-box superfamily protein3.0e-1247.17Show/hide
Query:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        +G A++   C++CL EF+ +D +  LP C+H FH+NCI+ W++ N+ TCPLCR
Subjt:  DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR

AT5G43420.1 RING/U-box superfamily protein1.3e-1044.64Show/hide
Query:  DGTAEDEVM---CSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR
        +G  E+E     CS+CL+EF  ++ +  +P+C+H+FHI+CI+ W++ NN  CPLCR
Subjt:  DGTAEDEVM---CSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAATTCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTG
CATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGG
mRNA sequenceShow/hide mRNA sequence
GACGGTACAGCGGAGGACGAGGTCATGTGCTCCATCTGTTTGACGGAATTCGCGAGACAAGATTCCGTGTACGAACTTCCCGATTGTGCGCACGTCTTCCATATCAATTG
CATCGAGAAGTGGATGGAGAGGAACAACTTCACCTGCCCGCTCTGTAGG
Protein sequenceShow/hide protein sequence
DGTAEDEVMCSICLTEFARQDSVYELPDCAHVFHINCIEKWMERNNFTCPLCR