; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0419 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0419
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationMC02:3604200..3608150
RNA-Seq ExpressionMC02g0419
SyntenyMC02g0419
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]1.77e-16392.4Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGS+P V+PQYGKHGG HG+G RHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

XP_022140633.1 nuclear cap-binding protein subunit 2 [Momordica charantia]1.61e-17799.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD

Query:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
Subjt:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

XP_022943536.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita moschata]4.34e-16493.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGSVP VIPQYGKHGG HG+G RHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]1.51e-16492.8Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF LYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGS+P VIPQYGKHGG HG+GHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]5.94e-16493.23Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRF GTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGS+P V+ QYGKHGG HGHGHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        DD HAHESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSDEEDDDD+KQRR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

TrEMBL top hitse value%identityAlignment
A0A1S3CLT9 Nuclear cap-binding protein subunit 27.02e-16392.4Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRF G+QDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGS+ PV+ QYGKHGG HGHGHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1CIF4 Nuclear cap-binding protein subunit 27.78e-17899.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
        DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD

Query:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
Subjt:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

A0A6J1FX36 Nuclear cap-binding protein subunit 22.10e-16493.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCFVLYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGSVP VIPQYGKHGG HG+G RHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1J7C7 Nuclear cap-binding protein subunit 27.33e-16592.8Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF LYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGS+P VIPQYGKHGG HG+GHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

A0A6J1JFW0 Nuclear cap-binding protein subunit 26.77e-16392.8Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDP+KLSVYRDRRFQGTQDEFE+ALQTS TVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKN+KTPCGFCF LYYSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD
        DDRPIR DFDWGFQDGRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLGS+P VIPQYGKHGG HG+GHRHGRDYH RKRYRD
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYH-RKRYRD

Query:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        DD HAHESSKRTSDY+SRRNPDHESRP KNPRFRESGDSDEEDDDDRKQR
Subjt:  DDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

SwissProt top hitse value%identityAlignment
B1WC40 Nuclear cap-binding protein subunit 22.8e-5268.79Show/hide
Query:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR DAE+A++Y++GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD   GGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKE

B7P877 Nuclear cap-binding protein subunit 24.7e-5266.67Show/hide
Query:  LSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFD
        LS YRD+ F+G++ E E  L+ S T+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+REDAE+A++Y++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKEL
         GF +GRQ+GRG+SGGQVRDEYRTDYD   GGYGKL+ + +
Subjt:  WGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKEL

Q84L14 Nuclear cap-binding protein subunit 22.6e-9573.2Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFKDPTKLS YRDRRF GTQ+E+E ALQ S+TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKN+KTPCGFCF+LYYSREDAEDAVKY+SGT+L
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD
        DDRPIRVDFDWGF++GRQWGRGRSGGQVRDEYRTDYDP  GGYGK+VQKELEAQR+LVDYG     + PP   + G    G+G  +R+ RDY RKRYR+D
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDD

Query:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR
        +     SS+R  D E +R+       EKNPRFRE GDSDEEDDD  K+RR
Subjt:  DHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRR

Q9CQ49 Nuclear cap-binding protein subunit 22.8e-5268.79Show/hide
Query:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR DAE+A++Y++GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKE
        D GF++GRQ+GRGRSGGQVRDEYR DYD   GGYGKL QK+
Subjt:  DWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKE

Q9XFD1 Nuclear cap-binding protein subunit 21.4e-10476.56Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFK+  KLS YRDRRF GTQ+EF+ AL+ S TVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKNTKTPCGFCFVL+YSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG +G G  +RHGR DYH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH

Query:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDD +  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.8e-1037.04Show/hide
Query:  IALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVD
        +A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  T+ P GF F+ + S +DA  A+K + G I+D R I V+
Subjt:  IALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVD

AT3G53460.1 chloroplast RNA-binding protein 296.9e-0626.74Show/hide
Query:  ITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF------------------DWGFQD
        + ++VGN+SF     Q+ +LF  AG ++ + +  DK T    GF FV   +  + E A +  +G   + RP+RV+                    +G + 
Subjt:  ITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF------------------DWGFQD

Query:  GRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHR
        G  +G  R GG   +          GGYG           Q   YG+GS GS           G G G G+R
Subjt:  GRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHR

AT3G53460.2 chloroplast RNA-binding protein 296.9e-0626.74Show/hide
Query:  ITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF------------------DWGFQD
        + ++VGN+SF     Q+ +LF  AG ++ + +  DK T    GF FV   +  + E A +  +G   + RP+RV+                    +G + 
Subjt:  ITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDF------------------DWGFQD

Query:  GRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHR
        G  +G  R GG   +          GGYG           Q   YG+GS GS           G G G G+R
Subjt:  GRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHR

AT5G44200.1 CAP-binding protein 201.0e-10576.56Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFK+  KLS YRDRRF GTQ+EF+ AL+ S TVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKNTKTPCGFCFVL+YSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG +G G  +RHGR DYH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH

Query:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDD +  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 201.0e-10576.56Show/hide
Query:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL
        MASLFK+  KLS YRDRRF GTQ+EF+ AL+ S TVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKNTKTPCGFCFVL+YSRED EDAVKY+SGTIL
Subjt:  MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTIL

Query:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH
        DDRPIRVDFDWGFQ+GRQWGRGRSGGQVRDEYRTDYDP  GGYGKLVQKELEAQRQLVDYGTGSLG+ P   P  YG   + GG +G G  +RHGR DYH
Subjt:  DDRPIRVDFDWGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIP-QYG---KHGGGHGHG--HRHGR-DYH

Query:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        RKR RDDD +  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  RKRYRDDDHHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTTGTTCAAGGACCCGACAAAGCTATCTGTATATCGGGATAGAAGATTTCAGGGAACCCAAGATGAATTTGAAATTGCACTTCAGACTTCAATCACCGTTTA
TGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATGGGTTTGGATAAGAATACGAAAACAC
CCTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAAGATGCAGAGGATGCTGTGAAATATATGAGTGGAACAATTCTTGATGATCGTCCTATCCGTGTGGATTTTGAT
TGGGGGTTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGTCAGGTGCGTGATGAATATCGAACAGACTACGATCCTGATATAGGTGGCTATGGAAAGTTGGT
CCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACCGGTTCACTGGGCTCTGTGCCGCCAGTGATACCTCAGTATGGAAAACACGGTGGAGGCCATGGAC
ATGGGCATCGGCATGGTAGAGATTACCATCGTAAGCGCTACCGAGATGATGATCACCATGCCCATGAAAGCTCTAAGAGAACGTCAGATTATGAATCTAGGAGGAACCCT
GATCATGAATCCAGACCGGAGAAGAATCCGAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAAGATGACGATGACCGAAAGCAGCGGCGCTAA
mRNA sequenceShow/hide mRNA sequence
GTAAAGATCATTCAGAAAGATTTTTCTGTTTTTTAATATTTATTTTACCTCACCGTCGCAGAACGGACAGGATTTGGGCGACTGAGCTCACCCTACGAGTTCTCCAGTTC
TGAGGCAAAATCTATCCAATAAATTAATAATTACCATCTACTCTGATTTGGAGCGGTTCTATCTCTGTTCACCTAGTTCTTCCTTTTTCCTTTCGTTATCGCCCGGGTGA
TTATATTGTTGCCCAGATTCCGAACACATATATAAGGATTTCATCTTGAAGCTTGGGTTTGTTAACTGCCTGCTAAGTTGCTTCGCCAAAAGTGGGTTTTCGAGTTGCGG
TGCAGATTTTGTTATTCTAGGGTTCATGGCTTCGTTGTTCAAGGACCCGACAAAGCTATCTGTATATCGGGATAGAAGATTTCAGGGAACCCAAGATGAATTTGAAATTG
CACTTCAGACTTCAATCACCGTTTATGTGGGAAATATGTCCTTTTATACAACAGAAGAGCAAGTATATGAGCTTTTTTCTCGAGCTGGAGAAATTAAGAAGATAATCATG
GGTTTGGATAAGAATACGAAAACACCCTGTGGCTTTTGTTTTGTCCTATACTATTCTCGGGAAGATGCAGAGGATGCTGTGAAATATATGAGTGGAACAATTCTTGATGA
TCGTCCTATCCGTGTGGATTTTGATTGGGGGTTTCAGGATGGCAGGCAATGGGGTCGTGGTCGAAGTGGTGGTCAGGTGCGTGATGAATATCGAACAGACTACGATCCTG
ATATAGGTGGCTATGGAAAGTTGGTCCAGAAAGAGTTAGAAGCACAGAGGCAGCTTGTGGATTATGGTACCGGTTCACTGGGCTCTGTGCCGCCAGTGATACCTCAGTAT
GGAAAACACGGTGGAGGCCATGGACATGGGCATCGGCATGGTAGAGATTACCATCGTAAGCGCTACCGAGATGATGATCACCATGCCCATGAAAGCTCTAAGAGAACGTC
AGATTATGAATCTAGGAGGAACCCTGATCATGAATCCAGACCGGAGAAGAATCCGAGGTTTCGGGAGAGTGGCGATTCTGATGAAGAAGATGACGATGACCGAAAGCAGC
GGCGCTAACCCGATTGTCATTGCCATATTTTAATGTGAGGAACCATTTAAATTGGCCAGCATAAGTGATATAGGGGACAAGTTCATTACTTCCGCATGTCAAAACTAACG
AGTTATTCTTCTCTGTGTCATGAGATACGTTGTGCTTAGTTTAACGAAGGAATGACTTCAATTGCCGTCTTTACTGTTTATTATACGGAATCAAGTAGGCATTTTGTCAC
ACTATCTTCCAAAAAGATGAATAATACGACTCTCAACATAAAGTACTATTGGCAAGTGTTTTTTTGAGCGCATTTGCGACACCAAAGGTGGTTCAAATGGCAGCTTTTTG
ACATATGAAAAGGTGAAATTTATTGAGTG
Protein sequenceShow/hide protein sequence
MASLFKDPTKLSVYRDRRFQGTQDEFEIALQTSITVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVLYYSREDAEDAVKYMSGTILDDRPIRVDFD
WGFQDGRQWGRGRSGGQVRDEYRTDYDPDIGGYGKLVQKELEAQRQLVDYGTGSLGSVPPVIPQYGKHGGGHGHGHRHGRDYHRKRYRDDDHHAHESSKRTSDYESRRNP
DHESRPEKNPRFRESGDSDEEDDDDRKQRR