; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MC02g0436 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0436
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionRibosomal_L30 domain-containing protein
Genome locationMC02:3686194..3689733
RNA-Seq ExpressionMC02g0436
SyntenyMC02g0436
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR005996 - Ribosomal protein L30, bacterial-type
IPR016082 - Ribosomal protein L30, ferredoxin-like fold domain
IPR036919 - Ribosomal protein L30, ferredoxin-like fold domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604875.1 hypothetical protein SDJN03_02192, partial [Cucurbita argyrosperma subsp. sororia]1.64e-6792.04Show/hide
Query:  IFEILDMNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPL
        I E+LDMNAFKAFKANVPIAWSPNLYITLVRG+PGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGMIQQVKRLVVVETEEM+KARKQKVEQHK+LRPPL
Subjt:  IFEILDMNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPL

Query:  VVNHLPVPSSTSA
        VVNHLP PSS S+
Subjt:  VVNHLPVPSSTSA

XP_008455933.1 PREDICTED: 50S ribosomal protein L30 [Cucumis melo]1.15e-6492.52Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKA+VPIAWSPNLYITLVRGMPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQK+E+H+ALRPPLV+NHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS SA
Subjt:  VPSSTSA

XP_022140468.1 uncharacterized protein LOC111011134 [Momordica charantia]1.84e-70100Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSAP
        VPSSTSAP
Subjt:  VPSSTSAP

XP_022944386.1 uncharacterized protein LOC111448848 [Cucurbita moschata]8.10e-6594.39Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKANVPI WSPNLYITLVRGMPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGM+QQVKRLVVVETEEMYKARKQKVEQH ALRPPLVVNHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS SA
Subjt:  VPSSTSA

XP_023512952.1 uncharacterized protein LOC111777540 [Cucurbita pepo subsp. pepo]1.40e-6595.33Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGM+QQVKRLVVVETEEMYKARKQKVEQH ALRPPLVVNHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS SA
Subjt:  VPSSTSA

TrEMBL top hitse value%identityAlignment
A0A1S3C214 50S ribosomal protein L305.57e-6592.52Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKA+VPIAWSPNLYITLVRGMPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQK+E+H+ALRPPLV+NHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS SA
Subjt:  VPSSTSA

A0A5A7VAZ6 50S ribosomal protein L305.57e-6592.52Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKA+VPIAWSPNLYITLVRGMPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQK+E+H+ALRPPLV+NHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS SA
Subjt:  VPSSTSA

A0A6J1CI25 uncharacterized protein LOC1110111348.90e-71100Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSAP
        VPSSTSAP
Subjt:  VPSSTSAP

A0A6J1FUA4 uncharacterized protein LOC1114488483.92e-6594.39Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKANVPI WSPNLYITLVRGMPGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGM+QQVKRLVVVETEEMYKARKQKVEQH ALRPPLVVNHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS SA
Subjt:  VPSSTSA

A0A6J1G641 uncharacterized protein LOC1114511217.67e-6593.46Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP
        MNAFKAFKANVPIAWSPNLYITLVRG+PGTRRLHRRTLEALRL KCNRTVMRWNTPTVRGMIQQVKRLVVVETEEM+KARKQKVEQHK+LRPPLVVNHLP
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLP

Query:  VPSSTSA
         PSS S+
Subjt:  VPSSTSA

SwissProt top hitse value%identityAlignment
A4QBL5 50S ribosomal protein L301.7e-0448.15Show/hide
Query:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE
        L IT ++G  GT+  HR  L +L L +   TV+R +TP VRGMI  V+ L+VVE
Subjt:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE

A8ZV75 50S ribosomal protein L307.5e-0545.61Show/hide
Query:  SPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE
        S ++ +TL + M G    HR+ L A+ L K NRTV   +TPTV+GMI++V  L+ VE
Subjt:  SPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE

C3PL27 50S ribosomal protein L301.3e-0442.59Show/hide
Query:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE
        L IT V+G+ GT+  HR  +E+L L +   +V++ +TP +RGM+ +V+ LV VE
Subjt:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE

Q8FS51 50S ribosomal protein L309.8e-0548.15Show/hide
Query:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE
        L IT V+G  GT+  HR  L +L L +   +V+R +TP VRGM+Q V+ L+VVE
Subjt:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE

Q8NSX3 50S ribosomal protein L309.8e-0548.15Show/hide
Query:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE
        L IT ++G  GT+  HR  L +L L +   TV+R +TP VRGMI  V+ L+VVE
Subjt:  LYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVE

Arabidopsis top hitse value%identityAlignment
AT5G55140.1 ribosomal protein L30 family protein1.0e-3369.39Show/hide
Query:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNH
        M+ F+AFKA VPI WS +LYITLVRG+PGTR+LHRRTLEA+ L +C+RTV+  N  ++RGMI QVKR+VVVETEEMY ARK+    HKALRPPLVV+H
Subjt:  MNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTTTGAGATCTTGGACATGAATGCCTTCAAGGCTTTCAAAGCGAATGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTCAGAGGGATGCCAGGAACAAG
GAGACTCCACAGACGTACTTTAGAGGCATTAAGGCTTGGGAAGTGCAACCGAACTGTCATGCGCTGGAACACACCAACTGTTAGGGGAATGATCCAACAGGTAAAGCGAT
TAGTAGTGGTTGAAACAGAAGAAATGTACAAAGCACGTAAACAGAAGGTGGAACAACACAAGGCTCTTCGACCTCCATTAGTTGTAAATCACCTTCCTGTTCCAAGTTCT
ACTTCTGCTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTTTGAGATCTTGGACATGAATGCCTTCAAGGCTTTCAAAGCGAATGTCCCAATTGCATGGAGTCCTAATCTTTATATCACATTAGTCAGAGGGATGCCAGGAACAAG
GAGACTCCACAGACGTACTTTAGAGGCATTAAGGCTTGGGAAGTGCAACCGAACTGTCATGCGCTGGAACACACCAACTGTTAGGGGAATGATCCAACAGGTAAAGCGAT
TAGTAGTGGTTGAAACAGAAGAAATGTACAAAGCACGTAAACAGAAGGTGGAACAACACAAGGCTCTTCGACCTCCATTAGTTGTAAATCACCTTCCTGTTCCAAGTTCT
ACTTCTGCTCCTTGAAAACATGTATTGCTGTTAGAGGTCAGGTCTACTTCTCAAGTATTGGGACGATGTTGAAAAGGATTATATTTGAGCTGTGTATTTTTCTGGAATTA
TTTGTCAATCAAGGCTTTTATGCTCTACACATCTTCCTGAGTCTAGTTGCGAACTAAAATAATTATTGAAACATTTCCCAGTTTGAAAATTAAATGTCTATCAAATGCTA
CTTCAGTAGGAACCCGTCTATTAGACACGGCTGTTTGCACCAATGAATGTACGGCCCTTTGCACTTTAGAACATGGGATTACTTGAAATATGCTGAATGGTTTAAATTAT
ATAAAACCCTGGAAGACAAAATGGCAATCGCTGATCTGTTCATTAATGCTGTAAGCATAGCCATAGGATGGTTGTAGCTATAGGCTTCTAGATAATCAAACTCATGCAGG
ATTTGAAACTTATAAAATGGACACCTTGATGAAGCATACACTCTAGATTTCTGTTGCCTTCATGCTTGTTGGCCCTTCCATTTCAACTGCGACCATGTTACTTGAATTCT
TGAGTTCCTCATTGTTGTCTGTGGAATTGGAATAATGCTGGTCTTTATACTGATGTTTACGGGCTAGGAGAAGAAAAAATAAGAAGTTTAGCAGCCCCAGCACTGCAAGT
AACCAATAGAAGTAGTTCAAACTTCCCTTGTTGAGATTACTTCTCAGCCAGCGCTTGTTGGTTACTTTATCTACAATTGTTACCAACAAGCTACTAACAAAAAATCCCAT
GGAAAGTGTGCTAAGGAAGAGTCCCGTGCTCATGGATTTCATTCGTTCCGGGGCTTCTCTGATGAAAAACTCGAGTTGTCCAACATATGCAAATGCCTCTCCAGCACCAA
TCAAGAAGTACTGGGGAATTAACCAGAAAGCACTTATCTGAATATTTTGCCCCACAGAGAATGCCCTCCTTTCTTTCTCAACAATTCCAGCAGCCACCATGCCAAAAACT
GCGAAAACGAGGCCAATCCCAATCCTCTGAAGGCTTGTGAGACCTTGGACATTGTGAGTCAGCTTCCGAGCGATCGGTATGAATAGTTTCTCATTCAAGGAAGTCACCAG
CAGGATGGTGATGAACAGGAAGGCAGACATAGAACCGGCAGGAATCTCAAGACTGCCAACGATTCTGTCCATAAATGAGGCTTGCTCCACTGTGAATGTAGTCATCTGAG
AGTAGATCGTCCAAAACAGGATGCCAGTGGACCAGATGGGTAAGAGCTTCAACACCATTTTCACTTCTTCAACTTCAGTCACCGTCGAGACTATCCAGGGGTTGTATCTG
TTTTGGTCGACAGCAGTGTACTCATCCAGAATTGCAGCTTTGTCAAGACACCTAATATTTTCATTTTCATTACATTATTTGCTTGCCAAATGGTGGAGATATCAAACGAA
TTGAAAAAGACAAGCTTGAATAGTGTGTTTTTCCTTTTGTTTCATCAACAATGCATCTTGCAGCATATCTTTTAATATATTCAGAACAAAAAACAGGTAGCCGACGAAAC
AGAAGCAAAAGATGTTAAACCTTGTCAATGTGCCTTGTTTCCCGCTAATAGTCAATTGGCTGGATATCTAGTACTTTTTATCCATTGTAAGTTTACATCTCGTCTTTCTC
ATTTGTAATGTATTGTAAAAGAGATAAAAGAGTGACTATGTAGCAATAGATCTAAGAATACTTACTTGAACTTGCAAGTGTAAGGAACCTTGGCGTTTTGGTAGTCATTT
AAGAAGCTGGGATGAGCTGGGTGAGGGAGATTTCTCTTCTTCCAAGCCAAAAGCACCACCCTCCATATAACTGTAAGGGGACTTCCTCTAGGCTTCTTAAACCTGTAAAA
CGTTGTCCCACAAAGCAATACAATAACAGCAATCACCATGGTCCCTCCTGAGATTCCATATCCCCATCCTCTCCCCACTTTGTCCTGTACATAAACCAACACAATGACAG
CGAACAACGACCCAATACTTATGGCAAAGTAGAACCTATTGAAGAAGAAGATCATGGCCTTCTCCTCCTTTGGATCATTGATGTCGAATTGATCGGACCCGAATCCCGAA
ACGTTTGATTTTATCCCACCTCCGCCAAGTGCTATTGTGTAAAGTGCAGCGTAGAGCAGGGCAAGTTGCCCACCATTAGCTGCAATGCACTGATGGAGTTGCCTTCTGAA
GTCATCACAATGAGGGGGTCTCATGCCAGGGATGGTTGTGGCCAGTGTTAACAAAATCACACCCTGCAGAAAGCCAGGAGACCGATGTATGAGGCTGATTGCAGGTTGGT
AAAGTAATTTTCTTTGTTTTTAAGTCATTCATAGTGGCTTTTAACTTCTTACCACAGCAGTTATGGAAGCAAAGATTGCAACAGTGAGGTACCGTCCAAGCCTAGCATCT
GCTAAGAATCCACCGAGAAGGCCAAGAAGATTAAGAGCACCCAAAAAGTTGGTCACAATATTGGCAGATTTGGCTGAAGAGAGATGCAAATCCCCAACTAAATATGTCAC
CAAGTTCATTGATATGCCCATCACACATATTCTTTCAGAAAGTTCAGTTCCTGCATCATTTTTAGCATTCAAATTAACCATTATCAAGCTCATTTCATTGATAAAAGTTG
GAATCTCGGTCTTCTGTGAAAACCAAAGAAATATATATACCTAAGATGAGCCCTGCAGCAAGCCATCCCCCTGTTTTTGATTTGTCCACTGGGTTCCCCCAAAAATCTAA
TGCAGCATCATCCTCTCCTCCTTCACTCCCATGTTTTGCAACCAAAACCTGTTGAAAACAAAGAAAAAAAAGAAACTTTTAGAAAAAGCCATATCAGAGCCAACAGGTAG
CATGGAGTTTCTCCATAAACAAGTTACCATTTTTTTTTATTTGGTTTGTTTCTCTCCAGTAGAGAGAGAGAGAGGGAGAGAGAGGAAGAGAGGAGGGAGTGCTTGTTACT
TGTGAGCTATAGTTGTGCTTAGATTCATGATTTATTGGAAATCAAAAAGTTAGAGTGTATGATTGGGATTATAGGAGAGAGAAGAAGATAGGATTGGAACTAAATCAGCT
TGTGGCTTATACATTT
Protein sequenceShow/hide protein sequence
IFEILDMNAFKAFKANVPIAWSPNLYITLVRGMPGTRRLHRRTLEALRLGKCNRTVMRWNTPTVRGMIQQVKRLVVVETEEMYKARKQKVEQHKALRPPLVVNHLPVPSS
TSAP