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MC02g0582 (gene) of Bitter gourd (Dali-11) v1 genome

Gene IDMC02g0582
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationMC02:4700763..4701114
RNA-Seq ExpressionMC02g0582
SyntenyMC02g0582
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]3.03e-2136.75Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + P+ AL+P  C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +   LS+   G  F K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

RVW33879.1 putative ribonuclease H protein [Vitis vinifera]7.97e-2235.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + P+ AL+P  C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +   L++   G  F K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

RVW65318.1 hypothetical protein CK203_058130 [Vitis vinifera]7.07e-2235.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + PH AL+P+ C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +     T   G    K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

RVW79087.1 putative ribonuclease H protein [Vitis vinifera]1.58e-2135.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + PH AL+P+ C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +     T   G    K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

RVW92607.1 putative ribonuclease H protein [Vitis vinifera]1.58e-2135.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + PH AL+P+ C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +     T   G    K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

TrEMBL top hitse value%identityAlignment
A0A438DEP1 Putative ribonuclease H protein3.86e-2235.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + P+ AL+P  C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +   L++   G  F K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

A0A438FZH6 zf-RVT domain-containing protein3.42e-2235.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + PH AL+P+ C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +     T   G    K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

A0A438H449 Putative ribonuclease H protein7.63e-2235.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + PH AL+P+ C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +     T   G    K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

A0A438I7G2 Putative ribonuclease H protein7.63e-2235.9Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + PH AL+P+ C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +     T   G    K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

A5BCI7 Reverse transcriptase domain-containing protein1.47e-2136.75Show/hide
Query:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV
        VP K+K F W ++H+ +NT D +Q + P+ AL+P  C LC K  E   HLF+ C ++   WHR+ +    +  +P+ +   LS+   G  F K G +LW 
Subjt:  VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLH-FLSTLLVGHPFKKEGGILWV

Query:  QLVQAFLWSVWLERNTQ
            A +W VW ERN +
Subjt:  QLVQAFLWSVWLERNTQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTACCAGGAAAAATAAAATTTTTCTGCTGGGAGATTAGCCACGAAGCCATTAACACCTATGATAGGATACAAAGGCAGTTGCCCCATGTTGCTCTCAACCCTAGTTGCTG
CTATCTATGCTATAAAGAAGCTGAAATACAAGGTCATCTCTTTATATCATGTGATATTTCCTCAATTTTCTGGCATAGAATGCTCGAAGATCGGTTGGCAAACCGTGCTG
CACCAAAGCCCCTCCATTTCCTTAGCACTTTGCTGGTTGGTCATCCATTTAAGAAAGAGGGAGGAATCCTTTGGGTTCAACTTGTTCAGGCCTTTCTATGGAGTGTATGG
TTGGAGAGGAACACACAATTT
mRNA sequenceShow/hide mRNA sequence
GTACCAGGAAAAATAAAATTTTTCTGCTGGGAGATTAGCCACGAAGCCATTAACACCTATGATAGGATACAAAGGCAGTTGCCCCATGTTGCTCTCAACCCTAGTTGCTG
CTATCTATGCTATAAAGAAGCTGAAATACAAGGTCATCTCTTTATATCATGTGATATTTCCTCAATTTTCTGGCATAGAATGCTCGAAGATCGGTTGGCAAACCGTGCTG
CACCAAAGCCCCTCCATTTCCTTAGCACTTTGCTGGTTGGTCATCCATTTAAGAAAGAGGGAGGAATCCTTTGGGTTCAACTTGTTCAGGCCTTTCTATGGAGTGTATGG
TTGGAGAGGAACACACAATTT
Protein sequenceShow/hide protein sequence
VPGKIKFFCWEISHEAINTYDRIQRQLPHVALNPSCCYLCYKEAEIQGHLFISCDISSIFWHRMLEDRLANRAAPKPLHFLSTLLVGHPFKKEGGILWVQLVQAFLWSVW
LERNTQF